| Record Information |
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| Version | 2.0 |
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| Created at | 2022-09-05 03:52:27 UTC |
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| Updated at | 2022-09-05 03:52:27 UTC |
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| NP-MRD ID | NP0207316 |
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| Secondary Accession Numbers | None |
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| Natural Product Identification |
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| Common Name | (2r)-n-[(2s,3r,4e,16r)-1-{[(2r,3r,4r,5s,6r)-3,4-dihydroxy-6-(hydroxymethyl)-5-{[(2s,3r,4s,5r,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-3-hydroxy-16-methyloctadec-4-en-2-yl]-2-hydroxytetracosanimidic acid |
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| Description | (2R)-N-[(2S,3R,4E,16R)-1-{[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-3-hydroxy-16-methyloctadec-4-en-2-yl]-2-hydroxytetracosanimidic acid belongs to the class of organic compounds known as glycosphingolipids. These are sphingolipids containing a saccharide moiety glycosidically attached to the sphingoid base. Although saccharide moieties are mostly O-glycosidically linked to the ceramide moiety, other sphingolipids with glycosidic bonds of other types (e.G. S-,C-, or N-type) has been reported. (2r)-n-[(2s,3r,4e,16r)-1-{[(2r,3r,4r,5s,6r)-3,4-dihydroxy-6-(hydroxymethyl)-5-{[(2s,3r,4s,5r,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-3-hydroxy-16-methyloctadec-4-en-2-yl]-2-hydroxytetracosanimidic acid is found in Luidia maculata. Based on a literature review very few articles have been published on (2R)-N-[(2S,3R,4E,16R)-1-{[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-3-hydroxy-16-methyloctadec-4-en-2-yl]-2-hydroxytetracosanimidic acid. |
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| Structure | CCCCCCCCCCCCCCCCCCCCCC[C@@H](O)C(O)=N[C@@H](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O)[C@H](O)\C=C\CCCCCCCCCC[C@H](C)CC InChI=1S/C55H105NO14/c1-4-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-25-28-31-34-37-44(60)53(66)56-42(43(59)36-33-30-27-24-22-21-23-26-29-32-35-41(3)5-2)40-67-54-51(65)49(63)52(46(39-58)69-54)70-55-50(64)48(62)47(61)45(38-57)68-55/h33,36,41-52,54-55,57-65H,4-32,34-35,37-40H2,1-3H3,(H,56,66)/b36-33+/t41-,42+,43-,44-,45-,46-,47+,48+,49-,50-,51-,52-,54-,55+/m1/s1 |
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| Synonyms | | Value | Source |
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| (2R)-N-[(2S,3R,4E,16R)-1-{[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-3-hydroxy-16-methyloctadec-4-en-2-yl]-2-hydroxytetracosanimidate | Generator |
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| Chemical Formula | C55H105NO14 |
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| Average Mass | 1004.4380 Da |
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| Monoisotopic Mass | 1003.75351 Da |
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| IUPAC Name | (2R)-N-[(2S,3R,4E,16R)-1-{[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-3-hydroxy-16-methyloctadec-4-en-2-yl]-2-hydroxytetracosanimidic acid |
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| Traditional Name | (2R)-N-[(2S,3R,4E,16R)-1-{[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-3-hydroxy-16-methyloctadec-4-en-2-yl]-2-hydroxytetracosanimidic acid |
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| CAS Registry Number | Not Available |
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| SMILES | CCCCCCCCCCCCCCCCCCCCCC[C@@H](O)C(O)=N[C@@H](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O)[C@H]2O)[C@H](O)[C@H]1O)[C@H](O)\C=C\CCCCCCCCCC[C@H](C)CC |
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| InChI Identifier | InChI=1S/C55H105NO14/c1-4-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-25-28-31-34-37-44(60)53(66)56-42(43(59)36-33-30-27-24-22-21-23-26-29-32-35-41(3)5-2)40-67-54-51(65)49(63)52(46(39-58)69-54)70-55-50(64)48(62)47(61)45(38-57)68-55/h33,36,41-52,54-55,57-65H,4-32,34-35,37-40H2,1-3H3,(H,56,66)/b36-33+/t41-,42+,43-,44-,45-,46-,47+,48+,49-,50-,51-,52-,54-,55+/m1/s1 |
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| InChI Key | CGFYLVORONLSQF-LBYDKLBXSA-N |
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| Experimental Spectra |
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| Not Available | | Predicted Spectra |
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| Not Available | | Chemical Shift Submissions |
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| Not Available | | Species |
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| Species of Origin | |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as glycosphingolipids. These are sphingolipids containing a saccharide moiety glycosidically attached to the sphingoid base. Although saccharide moieties are mostly O-glycosidically linked to the ceramide moiety, other sphingolipids with glycosidic bonds of other types (e.G. S-,C-, or N-type) has been reported. |
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| Kingdom | Organic compounds |
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| Super Class | Lipids and lipid-like molecules |
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| Class | Sphingolipids |
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| Sub Class | Glycosphingolipids |
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| Direct Parent | Glycosphingolipids |
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| Alternative Parents | |
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| Substituents | - Glycosphingolipid
- Fatty acyl glycoside
- Fatty acyl glycoside of mono- or disaccharide
- Alkyl glycoside
- Disaccharide
- Glycosyl compound
- O-glycosyl compound
- Fatty acyl
- Oxane
- Secondary alcohol
- Organic 1,3-dipolar compound
- Propargyl-type 1,3-dipolar organic compound
- Carboximidic acid
- Carboximidic acid derivative
- Oxacycle
- Acetal
- Polyol
- Organoheterocyclic compound
- Hydrocarbon derivative
- Organic nitrogen compound
- Organonitrogen compound
- Organooxygen compound
- Alcohol
- Organic oxygen compound
- Primary alcohol
- Organopnictogen compound
- Aliphatic heteromonocyclic compound
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| Molecular Framework | Aliphatic heteromonocyclic compounds |
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| External Descriptors | Not Available |
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| Physical Properties |
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| State | Not Available |
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| Experimental Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Predicted Properties | |
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