NP-MRD: Showing NP-Card for (1s,2s,4s,5r,8s,9s,11s,14s,15r)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0¹,⁵.0²,¹⁴.0¹¹,¹⁵]hexadecane-10,16-dione (NP0205909)

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Record Information

Version

2.0

Created at

2022-09-05 01:56:45 UTC

Updated at

2022-09-05 01:56:45 UTC

NP-MRD ID

NP0205909

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1s,2s,4s,5r,8s,9s,11s,14s,15r)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0¹,⁵.0²,¹⁴.0¹¹,¹⁵]hexadecane-10,16-dione

Description

(1S,2S,4S,5R,8S,9S,11S,14S,15R)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0¹,⁵.0²,¹⁴.0¹¹,¹⁵]Hexadecane-10,16-dione belongs to the class of organic compounds known as elisapterane, elisabane, cumbiane or colombiane diterpenoids. These are diterpenoids with a structure based on either the elisapterane, elisabane, cumbiane or colombiane skeleton. They derive from serrulatane. Elisapterane is a tetracyclic compound formed by C10-C15 cyclization of elisabethane. Elisabane (nor-elisapterane) results from the loss of the C17 carbon atom of elisapterane. Cumbiane is formed by C10-C16 cyclization of the elisabethane carbon skeleton. Meanwhile, the cleavage of the C15-C16 bond of cumbiane yields the seco-cumbiane skeleton. Colombiane is also a tetracyclic skeleton arises from the C12-C2 cyclization of the elisabethane skeleton. (1s,2s,4s,5r,8s,9s,11s,14s,15r)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0¹,⁵.0²,¹⁴.0¹¹,¹⁵]hexadecane-10,16-dione is found in Antillogorgia elisabethae. Based on a literature review very few articles have been published on (1S,2S,4S,5R,8S,9S,11S,14S,15R)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0¹,⁵.0²,¹⁴.0¹¹,¹⁵]Hexadecane-10,16-dione.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309052203562D          

 24 28  0  0  1  0            999 V2000
    1.0500    2.5438    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7354    2.0846    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4968    2.3850    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0693    1.7719    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0401    1.2974    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.7374    0.7171    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1544    1.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5079    0.4222    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5620   -0.1423    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7367   -0.1639    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.9722   -0.4665    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7946   -1.2721    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4080    0.1273    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3439   -0.6952    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7344   -0.3904    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8027   -1.2126    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0010    0.0002    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0165    0.8158    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7470    1.2677    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5837    1.0174    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.4500    1.4453    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7816    2.2008    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6809    0.6566    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8687    0.5119    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  0  0  0  0
  4  3  1  1  0  0  0
  5  4  1  6  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  6  9  1  0  0  0  0
 10  9  1  6  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 11 13  1  0  0  0  0
 13 14  1  1  0  0  0
 13 15  1  0  0  0  0
 15 16  1  1  0  0  0
 15 17  1  0  0  0  0
 17 18  1  0  0  0  0
 19 18  1  6  0  0  0
  2 19  1  0  0  0  0
 19 20  1  0  0  0  0
  4 20  1  0  0  0  0
 13 20  1  0  0  0  0
 20 21  1  1  0  0  0
 21 22  2  0  0  0  0
 21 23  1  0  0  0  0
 10 23  1  0  0  0  0
  5 23  1  0  0  0  0
 23 24  1  1  0  0  0
M  END

     RDKit          3D

 52 56  0  0  0  0  0  0  0  0999 V2000
    2.0775    3.1053   -1.1345 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6740    2.1381   -0.0440 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2201    2.1936    0.2764 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2789    0.7692    0.4065 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.6090    0.6880   -0.2611 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.6817    0.0534    0.5599 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6224    0.4362    2.0184 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0254    0.5823    0.0362 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6850   -1.2976    0.3501 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6678   -1.6128   -0.5490 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5071   -2.0403    0.2599 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7018   -2.9142    1.0930 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8242   -1.4680    0.0990 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.4574   -2.1658   -0.9576 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7170   -1.5752    1.2868 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.7870   -2.9977    1.7645 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1118   -1.2057    0.7602 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0966    0.2248    0.3921 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9835    0.6944   -0.4504 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7067   -0.0355   -0.3689 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0027   -0.1614   -1.7023 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4834   -0.1053   -2.8070 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4083   -0.3691   -1.3535 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.3265   -0.1920   -2.5038 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3259    3.2115   -1.9232 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1627    4.1157   -0.6371 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0854    2.8534   -1.4769 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2368    2.4354    0.8651 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0170    2.7978    1.1756 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2978    2.6986   -0.5761 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2780    0.4147    1.4536 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9676    1.6347   -0.6812 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6151    0.7507    2.4164 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9581    1.3378    2.1559 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2862   -0.3958    2.6686 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4470   -0.1181   -0.7324 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9300    1.6101   -0.3295 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7586    0.5915    0.8690 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9704   -2.4727   -1.1774 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9489   -1.5439   -1.5534 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4836   -0.8567    2.0828 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6350   -3.6510    0.8860 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8410   -3.1977    2.1131 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1272   -3.2196    2.6137 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8234   -1.3736    1.5867 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3748   -1.8882   -0.0842 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1629    0.8271    1.3419 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0621    0.4561   -0.1392 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3033    0.7281   -1.5267 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7273   -0.1873   -3.4412 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9078    0.7473   -2.4980 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0404   -1.0505   -2.6228 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  6  8  1  0
  6  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  2  0
 11 13  1  0
 13 14  1  6
 13 15  1  0
 15 16  1  0
 15 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  6
 21 22  2  0
 21 23  1  0
 23 24  1  6
 19  2  1  0
 20  4  1  0
 23  5  1  0
 23 10  1  0
 20 13  1  0
  1 25  1  0
  1 26  1  0
  1 27  1  0
  2 28  1  1
  3 29  1  0
  3 30  1  0
  4 31  1  1
  5 32  1  6
  7 33  1  0
  7 34  1  0
  7 35  1  0
  8 36  1  0
  8 37  1  0
  8 38  1  0
 10 39  1  6
 14 40  1  0
 15 41  1  1
 16 42  1  0
 16 43  1  0
 16 44  1  0
 17 45  1  0
 17 46  1  0
 18 47  1  0
 18 48  1  0
 19 49  1  6
 24 50  1  0
 24 51  1  0
 24 52  1  0
M  END


  Mrv1652309052203562D          

 24 28  0  0  1  0            999 V2000
    1.0500    2.5438    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7354    2.0846    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4968    2.3850    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0693    1.7719    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0401    1.2974    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.7374    0.7171    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1544    1.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5079    0.4222    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5620   -0.1423    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7367   -0.1639    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.9722   -0.4665    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7946   -1.2721    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4080    0.1273    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3439   -0.6952    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7344   -0.3904    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8027   -1.2126    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0010    0.0002    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0165    0.8158    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7470    1.2677    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5837    1.0174    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.4500    1.4453    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7816    2.2008    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6809    0.6566    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8687    0.5119    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  0  0  0  0
  4  3  1  1  0  0  0
  5  4  1  6  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  6  9  1  0  0  0  0
 10  9  1  6  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 11 13  1  0  0  0  0
 13 14  1  1  0  0  0
 13 15  1  0  0  0  0
 15 16  1  1  0  0  0
 15 17  1  0  0  0  0
 17 18  1  0  0  0  0
 19 18  1  6  0  0  0
  2 19  1  0  0  0  0
 19 20  1  0  0  0  0
  4 20  1  0  0  0  0
 13 20  1  0  0  0  0
 20 21  1  1  0  0  0
 21 22  2  0  0  0  0
 21 23  1  0  0  0  0
 10 23  1  0  0  0  0
  5 23  1  0  0  0  0
 23 24  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0205909

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@H]1C[C@H]2[C@@H]3C(C)(C)O[C@@H]4C(=O)[C@]5(O)[C@@H](C)CC[C@H]1[C@]25C(=O)[C@]34C

> <INCHI_IDENTIFIER>
InChI=1S/C20H28O4/c1-9-8-12-13-17(3,4)24-15-14(21)20(23)10(2)6-7-11(9)19(12,20)16(22)18(13,15)5/h9-13,15,23H,6-8H2,1-5H3/t9-,10-,11+,12-,13+,15+,18+,19+,20+/m0/s1

> <INCHI_KEY>
KNXYXOHODLWHAC-VPCHAZENSA-N

> <FORMULA>
C20H28O4

> <MOLECULAR_WEIGHT>
332.44

> <EXACT_MASS>
332.198759382

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
52

> <JCHEM_AVERAGE_POLARIZABILITY>
35.93111798327417

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,2S,4S,5R,8S,9S,11S,14S,15R)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0^{1,5}.0^{2,14}.0^{11,15}]hexadecane-10,16-dione

> <JCHEM_LOGP>
3.0985196069999996

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
16.978980261484924

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.26946758945396

> <JCHEM_PKA_STRONGEST_BASIC>
-3.9931188122295653

> <JCHEM_POLAR_SURFACE_AREA>
63.6

> <JCHEM_REFRACTIVITY>
88.21249999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2S,4S,5R,8S,9S,11S,14S,15R)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0^{1,5}.0^{2,14}.0^{11,15}]hexadecane-10,16-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 05-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-SEP-22         0                                  
HETATM    1  C   UNK     0       1.960   4.748   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.239   3.891   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       4.661   4.452   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       5.729   3.308   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       7.542   2.422   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       8.843   1.339   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       9.621   2.668   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      10.281   0.788   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0       8.516  -0.266   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0       6.975  -0.306   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       5.548  -0.871   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       5.217  -2.375   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       4.495   0.238   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       4.375  -1.298   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       3.238  -0.729   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       3.365  -2.264   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.869   0.000   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.897   1.523   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       3.261   2.366   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       4.823   1.899   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       6.440   2.698   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0       7.059   4.108   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0       6.871   1.226   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       5.355   0.955   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   19                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5   20                                                  
CONECT    5    4    6   23                                                  
CONECT    6    5    7    8    9                                             
CONECT    7    6                                                            
CONECT    8    6                                                            
CONECT    9    6   10                                                       
CONECT   10    9   11   23                                                  
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14   15   20                                             
CONECT   14   13                                                            
CONECT   15   13   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18    2   20                                                  
CONECT   20   19    4   13   21                                             
CONECT   21   20   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21   10    5   24                                             
CONECT   24   23                                                            
MASTER        0    0    0    0    0    0    0    0   24    0   56    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₂₈O₄

Average Mass

332.4400 Da

Monoisotopic Mass

332.19876 Da

IUPAC Name

(1S,2S,4S,5R,8S,9S,11S,14S,15R)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0^{1,5}.0^{2,14}.0^{11,15}]hexadecane-10,16-dione

Traditional Name

(1S,2S,4S,5R,8S,9S,11S,14S,15R)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0^{1,5}.0^{2,14}.0^{11,15}]hexadecane-10,16-dione

CAS Registry Number

Not Available

SMILES

C[C@H]1C[C@H]2[C@@H]3C(C)(C)O[C@@H]4C(=O)[C@]5(O)[C@@H](C)CC[C@H]1[C@]25C(=O)[C@]34C

InChI Identifier

InChI=1S/C20H28O4/c1-9-8-12-13-17(3,4)24-15-14(21)20(23)10(2)6-7-11(9)19(12,20)16(22)18(13,15)5/h9-13,15,23H,6-8H2,1-5H3/t9-,10-,11+,12-,13+,15+,18+,19+,20+/m0/s1

InChI Key

KNXYXOHODLWHAC-VPCHAZENSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Antillogorgia elisabethae	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as elisapterane, elisabane, cumbiane or colombiane diterpenoids. These are diterpenoids with a structure based on either the elisapterane, elisabane, cumbiane or colombiane skeleton. They derive from serrulatane. Elisapterane is a tetracyclic compound formed by C10-C15 cyclization of elisabethane. Elisabane (nor-elisapterane) results from the loss of the C17 carbon atom of elisapterane. Cumbiane is formed by C10-C16 cyclization of the elisabethane carbon skeleton. Meanwhile, the cleavage of the C15-C16 bond of cumbiane yields the seco-cumbiane skeleton. Colombiane is also a tetracyclic skeleton arises from the C12-C2 cyclization of the elisabethane skeleton.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Diterpenoids

Direct Parent

Elisapterane, elisabane, cumbiane or colombiane diterpenoids

Alternative Parents

Substituents

Elisapterane, elisabane, cumbiane or colombiane diterpenoid
Naphthofuran
Cyclic alcohol
Tertiary alcohol
Tetrahydrofuran
Ketone
Dialkyl ether
Ether
Oxacycle
Organoheterocyclic compound
Organic oxide
Alcohol
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Organic oxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.1	ChemAxon
pKa (Strongest Acidic)	12.27	ChemAxon
pKa (Strongest Basic)	-4	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	63.6 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	88.21 m³·mol⁻¹	ChemAxon
Polarizability	35.93 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

9231836

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

11056677

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1s,2s,4s,5r,8s,9s,11s,14s,15r)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0¹,⁵.0²,¹⁴.0¹¹,¹⁵]hexadecane-10,16-dione (NP0205909)

MOL for NP0205909 ((1s,2s,4s,5r,8s,9s,11s,14s,15r)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0¹,⁵.0²,¹⁴.0¹¹,¹⁵]hexadecane-10,16-dione)

3D MOL for NP0205909 ((1s,2s,4s,5r,8s,9s,11s,14s,15r)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0¹,⁵.0²,¹⁴.0¹¹,¹⁵]hexadecane-10,16-dione)

3D SDF for NP0205909 ((1s,2s,4s,5r,8s,9s,11s,14s,15r)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0¹,⁵.0²,¹⁴.0¹¹,¹⁵]hexadecane-10,16-dione)

3D-SDF for NP0205909 ((1s,2s,4s,5r,8s,9s,11s,14s,15r)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0¹,⁵.0²,¹⁴.0¹¹,¹⁵]hexadecane-10,16-dione)

PDB for NP0205909 ((1s,2s,4s,5r,8s,9s,11s,14s,15r)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0¹,⁵.0²,¹⁴.0¹¹,¹⁵]hexadecane-10,16-dione)

3D PDB for NP0205909 ((1s,2s,4s,5r,8s,9s,11s,14s,15r)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0¹,⁵.0²,¹⁴.0¹¹,¹⁵]hexadecane-10,16-dione)

SMILES for NP0205909 ((1s,2s,4s,5r,8s,9s,11s,14s,15r)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0¹,⁵.0²,¹⁴.0¹¹,¹⁵]hexadecane-10,16-dione)

INCHI for NP0205909 ((1s,2s,4s,5r,8s,9s,11s,14s,15r)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0¹,⁵.0²,¹⁴.0¹¹,¹⁵]hexadecane-10,16-dione)

Structure for NP0205909 ((1s,2s,4s,5r,8s,9s,11s,14s,15r)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0¹,⁵.0²,¹⁴.0¹¹,¹⁵]hexadecane-10,16-dione)

3D Structure for NP0205909 ((1s,2s,4s,5r,8s,9s,11s,14s,15r)-9-hydroxy-4,8,13,13,15-pentamethyl-12-oxapentacyclo[7.7.0.0¹,⁵.0²,¹⁴.0¹¹,¹⁵]hexadecane-10,16-dione)