NP-MRD: Showing NP-Card for (1s,2r,3r,4s,5s,6s,8r,9r,10s,13r,16s,17r,18s)-11-ethyl-6,18-dimethoxy-13-methyl-11-azahexacyclo[7.7.2.1²,⁵.0¹,¹⁰.0³,⁸.0¹³,¹⁷]nonadecane-4,8,9,16-tetrol (NP0204703)

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Record Information

Version

2.0

Created at

2022-09-05 00:25:53 UTC

Updated at

2022-09-05 00:25:53 UTC

NP-MRD ID

NP0204703

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1s,2r,3r,4s,5s,6s,8r,9r,10s,13r,16s,17r,18s)-11-ethyl-6,18-dimethoxy-13-methyl-11-azahexacyclo[7.7.2.1²,⁵.0¹,¹⁰.0³,⁸.0¹³,¹⁷]nonadecane-4,8,9,16-tetrol

Description

(1S,2R,3R,4S,5S,6S,8R,9R,10S,13R,16S,17R,18S)-11-ethyl-6,18-dimethoxy-13-methyl-11-azahexacyclo[7.7.2.1²,⁵.0¹,¹⁰.0³,⁸.0¹³,¹⁷]Nonadecane-4,8,9,16-tetrol belongs to the class of organic compounds known as aconitane-type diterpenoid alkaloids. These are alkaloid diterpenoids with a structure based on the hexacyclic aconitane skeleton. These compounds have no oxygen functionality at the C7 atom. Based on a literature review very few articles have been published on (1S,2R,3R,4S,5S,6S,8R,9R,10S,13R,16S,17R,18S)-11-ethyl-6,18-dimethoxy-13-methyl-11-azahexacyclo[7.7.2.1²,⁵.0¹,¹⁰.0³,⁸.0¹³,¹⁷]Nonadecane-4,8,9,16-tetrol.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309052202252D          

 30 35  0  0  1  0            999 V2000
   -0.4127    1.6580    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6716    0.7789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0976   -0.0965    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6588   -0.8063    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2975   -1.5822    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.0478   -2.0277    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0658   -2.4074    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7386   -2.6387    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2651   -1.9996    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.9066   -2.5645    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0555   -1.1386    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7448   -0.1610    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3214    0.0376    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3354    0.9120    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3127   -0.3021    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5785    0.1376    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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    2.2286   -0.1963    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3766    0.6635    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0429    0.0078    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6610   -0.5791    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
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  1  2  1  0  0  0  0
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  3  4  1  0  0  0  0
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  5  6  1  6  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  1  0  0  0
  9 11  1  0  0  0  0
 11 12  1  1  0  0  0
 12  3  1  6  0  0  0
 12 13  1  0  0  0  0
 13 14  1  1  0  0  0
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 15 16  1  6  0  0  0
 16 17  1  0  0  0  0
 18 15  1  1  0  0  0
 11 18  1  0  0  0  0
  5 18  1  0  0  0  0
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 11 27  1  0  0  0  0
 28 27  1  1  0  0  0
 19 28  1  0  0  0  0
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 25 29  1  0  0  0  0
 29 30  1  6  0  0  0
M  END

     RDKit          2D

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   -5.6122    2.6674    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.4630    1.1188    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652309052202252D          

 30 35  0  0  1  0            999 V2000
   -0.4127    1.6580    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6716    0.7789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0976   -0.0965    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6588   -0.8063    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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 28 27  1  1  0  0  0
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 28 29  1  0  0  0  0
 25 29  1  0  0  0  0
 29 30  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0204703

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCN1C[C@]2(C)CC[C@H](O)[C@@]34[C@@H]5C[C@H]6[C@H](O)[C@@H]5[C@](O)(C[C@@H]6OC)[C@](O)([C@@H](OC)[C@H]23)[C@@H]14

> <INCHI_IDENTIFIER>
InChI=1S/C23H37NO6/c1-5-24-10-20(2)7-6-14(25)22-12-8-11-13(29-3)9-21(27,15(12)16(11)26)23(28,19(22)24)18(30-4)17(20)22/h11-19,25-28H,5-10H2,1-4H3/t11-,12-,13+,14+,15-,16+,17-,18+,19+,20+,21-,22+,23+/m1/s1

> <INCHI_KEY>
RPONYIBDQZCORY-INICUGGLSA-N

> <FORMULA>
C23H37NO6

> <MOLECULAR_WEIGHT>
423.55

> <EXACT_MASS>
423.262087915

> <ALOGPS_LOGP>
-0.20

> <ALOGPS_LOGS>
-1.56

> <ALOGPS_SOLUBILITY>
1.16e+01 g/l

$$$$

HEADER    PROTEIN                                 05-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-SEP-22         0                                  
HETATM    1  C   UNK     0      -0.770   3.095   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.254   1.454   0.000  0.00  0.00           C+0
HETATM    3  N   UNK     0      -0.182  -0.180   0.000  0.00  0.00           N+0
HETATM    4  C   UNK     0      -1.230  -1.505   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -0.555  -2.953   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.956  -3.785   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.123  -4.494   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.379  -4.926   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       2.361  -3.733   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0       3.559  -4.787   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       1.970  -2.125   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.390  -0.301   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.467   0.070   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       2.493   1.702   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       0.584  -0.564   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0      -1.080   0.257   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0      -2.673   0.148   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       0.751  -2.251   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       4.160  -0.366   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       4.436   1.238   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       5.680   0.015   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       6.834  -1.081   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       8.418  -0.707   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       9.194   0.682   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       6.318  -2.659   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       4.787  -3.979   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       3.431  -2.924   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       4.314  -1.920   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       5.516  -3.304   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0       6.890  -4.277   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   12                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6    7   18                                             
CONECT    6    5                                                            
CONECT    7    5    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12   18   27                                             
CONECT   12   11    3   13                                                  
CONECT   13   12   14   15   19                                             
CONECT   14   13                                                            
CONECT   15   13   16   18                                                  
CONECT   16   15   17                                                       
CONECT   17   16                                                            
CONECT   18   15   11    5                                                  
CONECT   19   13   20   21   28                                             
CONECT   20   19                                                            
CONECT   21   19   22                                                       
CONECT   22   21   23   25                                                  
CONECT   23   22   24                                                       
CONECT   24   23                                                            
CONECT   25   22   26   29                                                  
CONECT   26   25   27                                                       
CONECT   27   26   11   28                                                  
CONECT   28   27   19   29                                                  
CONECT   29   28   25   30                                                  
CONECT   30   29                                                            
MASTER        0    0    0    0    0    0    0    0   30    0   70    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₃H₃₇NO₆

Average Mass

423.5500 Da

Monoisotopic Mass

423.26209 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

CCN1C[C@]2(C)CC[C@H](O)[C@@]34[C@@H]5C[C@H]6[C@H](O)[C@@H]5[C@](O)(C[C@@H]6OC)[C@](O)([C@@H](OC)[C@H]23)[C@@H]14

InChI Identifier

InChI=1S/C23H37NO6/c1-5-24-10-20(2)7-6-14(25)22-12-8-11-13(29-3)9-21(27,15(12)16(11)26)23(28,19(22)24)18(30-4)17(20)22/h11-19,25-28H,5-10H2,1-4H3/t11-,12-,13+,14+,15-,16+,17-,18+,19+,20+,21-,22+,23+/m1/s1

InChI Key

RPONYIBDQZCORY-INICUGGLSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as aconitane-type diterpenoid alkaloids. These are alkaloid diterpenoids with a structure based on the hexacyclic aconitane skeleton. These compounds have no oxygen functionality at the C7 atom.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Diterpenoids

Direct Parent

Aconitane-type diterpenoid alkaloids

Alternative Parents

Substituents

Aconitane-type diterpenoid alkaloid
Quinolidine
Alkaloid or derivatives
Azepane
Piperidine
Cyclic alcohol
Tertiary alcohol
1,2-aminoalcohol
Secondary alcohol
Tertiary aliphatic amine
Tertiary amine
Dialkyl ether
Ether
Polyol
Azacycle
Organoheterocyclic compound
Organonitrogen compound
Alcohol
Organic nitrogen compound
Organopnictogen compound
Organooxygen compound
Hydrocarbon derivative
Amine
Organic oxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163190584

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1s,2r,3r,4s,5s,6s,8r,9r,10s,13r,16s,17r,18s)-11-ethyl-6,18-dimethoxy-13-methyl-11-azahexacyclo[7.7.2.1²,⁵.0¹,¹⁰.0³,⁸.0¹³,¹⁷]nonadecane-4,8,9,16-tetrol (NP0204703)

MOL for NP0204703 ((1s,2r,3r,4s,5s,6s,8r,9r,10s,13r,16s,17r,18s)-11-ethyl-6,18-dimethoxy-13-methyl-11-azahexacyclo[7.7.2.1²,⁵.0¹,¹⁰.0³,⁸.0¹³,¹⁷]nonadecane-4,8,9,16-tetrol)

3D MOL for NP0204703 ((1s,2r,3r,4s,5s,6s,8r,9r,10s,13r,16s,17r,18s)-11-ethyl-6,18-dimethoxy-13-methyl-11-azahexacyclo[7.7.2.1²,⁵.0¹,¹⁰.0³,⁸.0¹³,¹⁷]nonadecane-4,8,9,16-tetrol)

3D SDF for NP0204703 ((1s,2r,3r,4s,5s,6s,8r,9r,10s,13r,16s,17r,18s)-11-ethyl-6,18-dimethoxy-13-methyl-11-azahexacyclo[7.7.2.1²,⁵.0¹,¹⁰.0³,⁸.0¹³,¹⁷]nonadecane-4,8,9,16-tetrol)

3D-SDF for NP0204703 ((1s,2r,3r,4s,5s,6s,8r,9r,10s,13r,16s,17r,18s)-11-ethyl-6,18-dimethoxy-13-methyl-11-azahexacyclo[7.7.2.1²,⁵.0¹,¹⁰.0³,⁸.0¹³,¹⁷]nonadecane-4,8,9,16-tetrol)

PDB for NP0204703 ((1s,2r,3r,4s,5s,6s,8r,9r,10s,13r,16s,17r,18s)-11-ethyl-6,18-dimethoxy-13-methyl-11-azahexacyclo[7.7.2.1²,⁵.0¹,¹⁰.0³,⁸.0¹³,¹⁷]nonadecane-4,8,9,16-tetrol)

3D PDB for NP0204703 ((1s,2r,3r,4s,5s,6s,8r,9r,10s,13r,16s,17r,18s)-11-ethyl-6,18-dimethoxy-13-methyl-11-azahexacyclo[7.7.2.1²,⁵.0¹,¹⁰.0³,⁸.0¹³,¹⁷]nonadecane-4,8,9,16-tetrol)

SMILES for NP0204703 ((1s,2r,3r,4s,5s,6s,8r,9r,10s,13r,16s,17r,18s)-11-ethyl-6,18-dimethoxy-13-methyl-11-azahexacyclo[7.7.2.1²,⁵.0¹,¹⁰.0³,⁸.0¹³,¹⁷]nonadecane-4,8,9,16-tetrol)

INCHI for NP0204703 ((1s,2r,3r,4s,5s,6s,8r,9r,10s,13r,16s,17r,18s)-11-ethyl-6,18-dimethoxy-13-methyl-11-azahexacyclo[7.7.2.1²,⁵.0¹,¹⁰.0³,⁸.0¹³,¹⁷]nonadecane-4,8,9,16-tetrol)

Structure for NP0204703 ((1s,2r,3r,4s,5s,6s,8r,9r,10s,13r,16s,17r,18s)-11-ethyl-6,18-dimethoxy-13-methyl-11-azahexacyclo[7.7.2.1²,⁵.0¹,¹⁰.0³,⁸.0¹³,¹⁷]nonadecane-4,8,9,16-tetrol)

3D Structure for NP0204703 ((1s,2r,3r,4s,5s,6s,8r,9r,10s,13r,16s,17r,18s)-11-ethyl-6,18-dimethoxy-13-methyl-11-azahexacyclo[7.7.2.1²,⁵.0¹,¹⁰.0³,⁸.0¹³,¹⁷]nonadecane-4,8,9,16-tetrol)