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Record Information
Version2.0
Created at2022-09-04 23:28:12 UTC
Updated at2022-09-04 23:28:12 UTC
NP-MRD IDNP0203899
Secondary Accession NumbersNone
Natural Product Identification
Common Name(1s,3ar,3br,7r,9as,9br,11as)-9a,11a-dimethyl-1-[(1r)-1-[(1r,2r)-2-methyl-2-(3-methylbutan-2-yl)cyclopropyl]ethyl]-1h,2h,3h,3ah,3bh,4h,6h,7h,8h,9h,9bh,10h,11h-cyclopenta[a]phenanthren-7-ol
DescriptionGorgosterol belongs to the class of organic compounds known as gorgostanes and derivatives. These are steroids containing a gorgostane moiety, which a skeleton characterized by the presence. (1s,3ar,3br,7r,9as,9br,11as)-9a,11a-dimethyl-1-[(1r)-1-[(1r,2r)-2-methyl-2-(3-methylbutan-2-yl)cyclopropyl]ethyl]-1h,2h,3h,3ah,3bh,4h,6h,7h,8h,9h,9bh,10h,11h-cyclopenta[a]phenanthren-7-ol is found in Acanthaster planci, Alitta succinea, Isis hippuris, Leptogorgia violetta and Peridinium foliaceum. (1s,3ar,3br,7r,9as,9br,11as)-9a,11a-dimethyl-1-[(1r)-1-[(1r,2r)-2-methyl-2-(3-methylbutan-2-yl)cyclopropyl]ethyl]-1h,2h,3h,3ah,3bh,4h,6h,7h,8h,9h,9bh,10h,11h-cyclopenta[a]phenanthren-7-ol was first documented in 2016 (PMID: 26134487). Based on a literature review a small amount of articles have been published on Gorgosterol (PMID: 34585632) (PMID: 34564185) (PMID: 34198015) (PMID: 28648587).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC30H50O
Average Mass426.7290 Da
Monoisotopic Mass426.38617 Da
IUPAC Name(1R,2S,5R,10R,11R,14S,15S)-2,15-dimethyl-14-[(1R)-1-[(1R,2R)-2-methyl-2-(3-methylbutan-2-yl)cyclopropyl]ethyl]tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-7-en-5-ol
Traditional Name(1R,2S,5R,10R,11R,14S,15S)-2,15-dimethyl-14-[(1R)-1-[(1R,2R)-2-methyl-2-(3-methylbutan-2-yl)cyclopropyl]ethyl]tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-7-en-5-ol
CAS Registry NumberNot Available
SMILES
CC(C)C(C)[C@@]1(C)C[C@@H]1[C@H](C)[C@@H]1CC[C@@H]2[C@H]3CC=C4C[C@H](O)CC[C@@]4(C)[C@@H]3CC[C@@]12C
InChI Identifier
InChI=1S/C30H50O/c1-18(2)20(4)30(7)17-27(30)19(3)24-10-11-25-23-9-8-21-16-22(31)12-14-28(21,5)26(23)13-15-29(24,25)6/h8,18-20,22-27,31H,9-17H2,1-7H3/t19-,20?,22-,23-,24+,25-,26-,27-,28-,29+,30-/m1/s1
InChI KeyYRPMZHRSQIFCLR-HADHOPQFSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Acanthaster planciLOTUS Database
Alitta succineaLOTUS Database
Isis hippurisLOTUS Database
Leptogorgia violettaLOTUS Database
Peridinium foliaceumLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as gorgostanes and derivatives. These are steroids containing a gorgostane moiety, which a skeleton characterized by the presence.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassGorgostanes and derivatives
Direct ParentGorgostanes and derivatives
Alternative Parents
Substituents
  • Gorgostane-skeleton
  • 3-alpha-hydroxysteroid
  • Hydroxysteroid
  • 3-hydroxysteroid
  • 3-hydroxy-delta-5-steroid
  • Delta-5-steroid
  • Cyclic alcohol
  • Secondary alcohol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Alcohol
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP7.37ChemAxon
pKa (Strongest Acidic)18.2ChemAxon
pKa (Strongest Basic)-1.4ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area20.23 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity132.33 m³·mol⁻¹ChemAxon
Polarizability55.36 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00046756
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound101306741
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Hegazy ME, Mohamed TA, Elshamy AI, Hassanien AA, Abdel-Azim NS, Shreadah MA, Abdelgawad II, Elkady EM, Pare PW: A new steroid from the Red Sea soft coral Lobophytum lobophytum. Nat Prod Res. 2016;30(3):340-4. doi: 10.1080/14786419.2015.1046871. Epub 2015 Jul 2. [PubMed:26134487 ]
  2. Zidan SAH, Abdelhamid RA, Alian A, Fouad MA, Matsunami K, Orabi MAA: Diterpenes and sterols from the Red Sea soft coral Sarcophyton trocheliophorum and their cytotoxicity and anti-leishmanial activities. J Asian Nat Prod Res. 2021 Sep 29:1-9. doi: 10.1080/10286020.2021.1979522. [PubMed:34585632 ]
  3. Pham GN, Kang DY, Kim MJ, Han SJ, Lee JH, Na M: Isolation of Sesquiterpenoids and Steroids from the Soft Coral Sinularia brassica and Determination of Their Absolute Configuration. Mar Drugs. 2021 Sep 17;19(9). pii: md19090523. doi: 10.3390/md19090523. [PubMed:34564185 ]
  4. Graeff JE, Leblond JD: Sterol Composition of the Peridinioid Dinoflagellate Zooxanthella nutricula, A Symbiont of Polycystine Radiolarians. Protist. 2021 Jul;172(3):125817. doi: 10.1016/j.protis.2021.125817. Epub 2021 May 20. [PubMed:34198015 ]
  5. He YQ, Lee Caplan S, Scesa P, West LM: Cyclized 9,11-secosterol enol-ethers from the gorgonian Pseudopterogorgia americana. Steroids. 2017 Sep;125:47-53. doi: 10.1016/j.steroids.2017.06.008. Epub 2017 Jun 23. [PubMed:28648587 ]
  6. LOTUS database [Link]