NP-MRD: Showing NP-Card for 1-[(5s,7r,8r,9r,12r,13s)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0¹,⁵.0⁷,¹².0¹⁵,²⁰]icosa-15,17,19-trien-14-yl]ethanone (NP0203728)

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Record Information

Version

2.0

Created at

2022-09-04 23:15:20 UTC

Updated at

2022-09-04 23:15:20 UTC

NP-MRD ID

NP0203728

Secondary Accession Numbers

None

Natural Product Identification

Common Name

1-[(5s,7r,8r,9r,12r,13s)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0¹,⁵.0⁷,¹².0¹⁵,²⁰]icosa-15,17,19-trien-14-yl]ethanone

Description

Malagashanol belongs to the class of organic compounds known as carbazoles. Carbazoles are compounds containing a three ring system containing a pyrrole ring fused on either side to a benzene ring. 1-[(5s,7r,8r,9r,12r,13s)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0¹,⁵.0⁷,¹².0¹⁵,²⁰]icosa-15,17,19-trien-14-yl]ethanone is found in Strychnos myrtoides. 1-[(5s,7r,8r,9r,12r,13s)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0¹,⁵.0⁷,¹².0¹⁵,²⁰]icosa-15,17,19-trien-14-yl]ethanone was first documented in 2020 (PMID: 32227835). Based on a literature review very few articles have been published on Malagashanol.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309052201152D          

 27 31  0  0  1  0            999 V2000
    3.7025   -3.7166    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9046   -3.5069    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3240   -4.0931    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6872   -2.7111    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.9156   -2.4191    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1823   -2.7972    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4883   -2.3512    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5275   -1.5272    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2608   -1.1491    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9548   -1.5951    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7507   -1.3777    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9352   -1.2526    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8022   -0.4384    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5355   -0.0603    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.6606    0.7552    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1217   -0.6408    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9453   -0.5937    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3980   -1.2834    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0270   -2.0203    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.4796   -2.7100    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3033   -2.6629    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6743   -1.9260    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.4979   -1.8789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2216   -1.2363    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.5926   -0.4994    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1400    0.1903    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2033   -2.0674    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  5 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 16 14  1  1  0  0  0
 11 16  1  0  0  0  0
 16 17  1  0  0  0  0
 18 17  1  1  0  0  0
 18 19  1  0  0  0  0
 19 20  1  1  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  1  0  0  0
 22 24  1  0  0  0  0
 18 24  1  0  0  0  0
 24 25  1  6  0  0  0
 25 26  1  0  0  0  0
 19 27  1  0  0  0  0
 27  4  1  6  0  0  0
 11 27  1  0  0  0  0
M  END

     RDKit          3D

 57 61  0  0  0  0  0  0  0  0999 V2000
   -3.2127    3.1177   -1.6057 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1340    2.1485   -1.8120 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5447    2.1012   -2.9456 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6838    1.2345   -0.8197 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1424    1.0658    0.5158 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7827    1.9636    1.3483 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1547    1.6080    2.6294 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8737    0.3392    3.0600 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2333   -0.5653    2.2336 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8540   -0.2275    0.9497 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1856   -0.8961   -0.1619 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.2272   -1.6233   -0.9824 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1072   -3.0685   -0.5397 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6657   -3.2000   -0.3573 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0947   -3.5216   -1.6332 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2256   -1.9583    0.1959 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1890   -1.5875   -0.2163 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4111   -0.1994    0.3987 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.6730    0.7778   -0.4475 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4898    1.3428   -1.5859 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8257    1.0576   -1.5135 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3041    1.2809   -0.2047 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.7964    1.3363   -0.1445 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8471    0.0909    0.6106 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.2387    0.2964    2.0380 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8196   -0.7942    2.7833 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6207    0.2390   -0.9669 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.6296    3.3920   -2.6200 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8830    4.0619   -1.1086 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1097    2.6697   -1.0850 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0089    2.9685    1.0187 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6559    2.3203    3.2724 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1771    0.0813    4.0758 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0444   -1.5472    2.6404 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8868   -1.6017   -2.0476 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2313   -1.2138   -0.8745 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4190   -3.7751   -1.3156 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6453   -3.2649    0.4065 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7403   -4.2899   -2.1129 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0633   -2.6576   -2.3252 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9166   -4.0114   -1.5328 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1825   -2.0901    1.3147 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2717   -1.4503   -1.3138 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9370   -2.2991    0.1482 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9126   -0.2027    1.4105 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4272    1.6612    0.2131 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1074    0.9076   -2.5526 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3692    2.4407   -1.6906 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8818    2.2218    0.2122 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0944    2.0699    0.6581 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2644    1.6962   -1.0819 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2600    0.3716    0.1523 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4544   -0.7830    0.2320 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7079    1.1847    2.4164 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3487    0.4069    2.0663 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3836   -1.5991    2.6224 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5117   -0.0267   -2.0255 H   0  0  0  0  0  0  0  0  0  0  0  0
 23 22  1  0
 22 21  1  0
 21 20  1  0
 20 19  1  0
 19 27  1  0
 27  4  1  0
  4  2  1  0
  2  1  1  0
  2  3  2  0
  4  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  6
 12 13  1  0
 13 14  1  0
 14 15  1  0
 14 16  1  0
 16 17  1  0
 17 18  1  0
 18 24  1  0
 24 25  1  0
 25 26  1  0
 24 22  1  0
 18 19  1  0
 11 27  1  0
 16 11  1  0
 10  5  1  0
 23 50  1  0
 23 51  1  0
 23 52  1  0
 22 49  1  1
 20 47  1  0
 20 48  1  0
 19 46  1  1
 27 57  1  6
  1 28  1  0
  1 29  1  0
  1 30  1  0
  6 31  1  0
  7 32  1  0
  8 33  1  0
  9 34  1  0
 12 35  1  0
 12 36  1  0
 13 37  1  0
 13 38  1  0
 15 39  1  0
 15 40  1  0
 15 41  1  0
 16 42  1  1
 17 43  1  0
 17 44  1  0
 18 45  1  1
 24 53  1  6
 25 54  1  0
 25 55  1  0
 26 56  1  0
M  END


  Mrv1652309052201152D          

 27 31  0  0  1  0            999 V2000
    3.7025   -3.7166    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9046   -3.5069    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3240   -4.0931    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6872   -2.7111    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.9156   -2.4191    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1823   -2.7972    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4883   -2.3512    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5275   -1.5272    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2608   -1.1491    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9548   -1.5951    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7507   -1.3777    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9352   -1.2526    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8022   -0.4384    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5355   -0.0603    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.6606    0.7552    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1217   -0.6408    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9453   -0.5937    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3980   -1.2834    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0270   -2.0203    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.4796   -2.7100    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3033   -2.6629    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6743   -1.9260    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.4979   -1.8789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2216   -1.2363    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.5926   -0.4994    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1400    0.1903    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2033   -2.0674    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  5 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 16 14  1  1  0  0  0
 11 16  1  0  0  0  0
 16 17  1  0  0  0  0
 18 17  1  1  0  0  0
 18 19  1  0  0  0  0
 19 20  1  1  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  1  0  0  0
 22 24  1  0  0  0  0
 18 24  1  0  0  0  0
 24 25  1  6  0  0  0
 25 26  1  0  0  0  0
 19 27  1  0  0  0  0
 27  4  1  6  0  0  0
 11 27  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0203728

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@H]1OC[C@H]2[C@@H]3N(C(C)=O)C4=CC=CC=C4C33CCN(C)[C@H]3C[C@H]2[C@@H]1CO

> <INCHI_IDENTIFIER>
InChI=1S/C22H30N2O3/c1-13-16(11-25)15-10-20-22(8-9-23(20)3)18-6-4-5-7-19(18)24(14(2)26)21(22)17(15)12-27-13/h4-7,13,15-17,20-21,25H,8-12H2,1-3H3/t13-,15+,16-,17-,20+,21+,22?/m1/s1

> <INCHI_KEY>
JZPZTBRHWIWFEK-OXUPRPCOSA-N

> <FORMULA>
C22H30N2O3

> <MOLECULAR_WEIGHT>
370.493

> <EXACT_MASS>
370.225642834

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
57

> <JCHEM_AVERAGE_POLARIZABILITY>
41.10218083382419

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
1-[(5S,7R,8R,9R,12R,13S)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0^{1,5}.0^{7,12}.0^{15,20}]icosa-15,17,19-trien-14-yl]ethan-1-one

> <JCHEM_LOGP>
0.5951168159999991

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_ACIDIC>
15.380795566696264

> <JCHEM_PKA_STRONGEST_BASIC>
9.063520465677708

> <JCHEM_POLAR_SURFACE_AREA>
53.010000000000005

> <JCHEM_REFRACTIVITY>
104.05850000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
1-[(5S,7R,8R,9R,12R,13S)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0^{1,5}.0^{7,12}.0^{15,20}]icosa-15,17,19-trien-14-yl]ethanone

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 05-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-SEP-22         0                                  
HETATM    1  C   UNK     0       6.911  -6.938   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       5.422  -6.546   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       4.338  -7.640   0.000  0.00  0.00           O+0
HETATM    4  N   UNK     0       5.016  -5.061   0.000  0.00  0.00           N+0
HETATM    5  C   UNK     0       3.576  -4.516   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.207  -5.221   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.911  -4.389   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.985  -2.851   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       2.353  -2.145   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       3.649  -2.977   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       5.135  -2.572   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       3.612  -2.338   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       3.364  -0.818   0.000  0.00  0.00           C+0
HETATM   14  N   UNK     0       4.733  -0.113   0.000  0.00  0.00           N+0
HETATM   15  C   UNK     0       4.967   1.410   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       5.827  -1.196   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       7.365  -1.108   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       8.210  -2.396   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       7.517  -3.771   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       8.362  -5.059   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       9.899  -4.971   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0      10.592  -3.595   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      12.129  -3.507   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       9.747  -2.308   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      10.440  -0.932   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       9.595   0.355   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0       5.980  -3.859   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5   27                                                  
CONECT    5    4    6   10                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9    5   11                                                  
CONECT   11   10   12   16   27                                             
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   11   17                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19   24                                                  
CONECT   19   18   20   27                                                  
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   18   25                                                  
CONECT   25   24   26                                                       
CONECT   26   25                                                            
CONECT   27   19    4   11                                                  
MASTER        0    0    0    0    0    0    0    0   27    0   62    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₂H₃₀N₂O₃

Average Mass

370.4930 Da

Monoisotopic Mass

370.22564 Da

IUPAC Name

1-[(5S,7R,8R,9R,12R,13S)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0^{1,5}.0^{7,12}.0^{15,20}]icosa-15,17,19-trien-14-yl]ethan-1-one

Traditional Name

1-[(5S,7R,8R,9R,12R,13S)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0^{1,5}.0^{7,12}.0^{15,20}]icosa-15,17,19-trien-14-yl]ethanone

CAS Registry Number

Not Available

SMILES

C[C@H]1OC[C@H]2[C@@H]3N(C(C)=O)C4=CC=CC=C4C33CCN(C)[C@H]3C[C@H]2[C@@H]1CO

InChI Identifier

InChI=1S/C22H30N2O3/c1-13-16(11-25)15-10-20-22(8-9-23(20)3)18-6-4-5-7-19(18)24(14(2)26)21(22)17(15)12-27-13/h4-7,13,15-17,20-21,25H,8-12H2,1-3H3/t13-,15+,16-,17-,20+,21+,22?/m1/s1

InChI Key

JZPZTBRHWIWFEK-OXUPRPCOSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Strychnos myrtoides	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as carbazoles. Carbazoles are compounds containing a three ring system containing a pyrrole ring fused on either side to a benzene ring.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Indoles and derivatives

Sub Class

Carbazoles

Direct Parent

Carbazoles

Alternative Parents

Substituents

Carbazole
Aralkylamine
Benzenoid
N-alkylpyrrolidine
Oxane
Acetamide
Tertiary carboxylic acid amide
Pyrrolidine
Tertiary aliphatic amine
Tertiary amine
Carboxamide group
Amino acid or derivatives
Oxacycle
Azacycle
Ether
Dialkyl ether
Carboxylic acid derivative
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Primary alcohol
Organooxygen compound
Organonitrogen compound
Carbonyl group
Amine
Alcohol
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.6	ChemAxon
pKa (Strongest Acidic)	15.38	ChemAxon
pKa (Strongest Basic)	9.06	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	53.01 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	104.06 m³·mol⁻¹	ChemAxon
Polarizability	41.1 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00039715

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

100978884

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Maertens G, Deruer E, Denis M, Canesi S: Common Strategy for the Synthesis of Some Strychnos Indole Alkaloids. J Org Chem. 2020 May 1;85(9):6098-6108. doi: 10.1021/acs.joc.0c00572. Epub 2020 Apr 10. [PubMed:32227835 ]
LOTUS database [Link]

Showing NP-Card for 1-[(5s,7r,8r,9r,12r,13s)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0¹,⁵.0⁷,¹².0¹⁵,²⁰]icosa-15,17,19-trien-14-yl]ethanone (NP0203728)

MOL for NP0203728 (1-[(5s,7r,8r,9r,12r,13s)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0¹,⁵.0⁷,¹².0¹⁵,²⁰]icosa-15,17,19-trien-14-yl]ethanone)

3D MOL for NP0203728 (1-[(5s,7r,8r,9r,12r,13s)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0¹,⁵.0⁷,¹².0¹⁵,²⁰]icosa-15,17,19-trien-14-yl]ethanone)

3D SDF for NP0203728 (1-[(5s,7r,8r,9r,12r,13s)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0¹,⁵.0⁷,¹².0¹⁵,²⁰]icosa-15,17,19-trien-14-yl]ethanone)

3D-SDF for NP0203728 (1-[(5s,7r,8r,9r,12r,13s)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0¹,⁵.0⁷,¹².0¹⁵,²⁰]icosa-15,17,19-trien-14-yl]ethanone)

PDB for NP0203728 (1-[(5s,7r,8r,9r,12r,13s)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0¹,⁵.0⁷,¹².0¹⁵,²⁰]icosa-15,17,19-trien-14-yl]ethanone)

3D PDB for NP0203728 (1-[(5s,7r,8r,9r,12r,13s)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0¹,⁵.0⁷,¹².0¹⁵,²⁰]icosa-15,17,19-trien-14-yl]ethanone)

SMILES for NP0203728 (1-[(5s,7r,8r,9r,12r,13s)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0¹,⁵.0⁷,¹².0¹⁵,²⁰]icosa-15,17,19-trien-14-yl]ethanone)

INCHI for NP0203728 (1-[(5s,7r,8r,9r,12r,13s)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0¹,⁵.0⁷,¹².0¹⁵,²⁰]icosa-15,17,19-trien-14-yl]ethanone)

Structure for NP0203728 (1-[(5s,7r,8r,9r,12r,13s)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0¹,⁵.0⁷,¹².0¹⁵,²⁰]icosa-15,17,19-trien-14-yl]ethanone)

3D Structure for NP0203728 (1-[(5s,7r,8r,9r,12r,13s)-8-(hydroxymethyl)-4,9-dimethyl-10-oxa-4,14-diazapentacyclo[11.7.0.0¹,⁵.0⁷,¹².0¹⁵,²⁰]icosa-15,17,19-trien-14-yl]ethanone)