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Record Information
Version2.0
Created at2022-09-04 22:36:21 UTC
Updated at2022-09-04 22:36:21 UTC
NP-MRD IDNP0203205
Secondary Accession NumbersNone
Natural Product Identification
Common Name(2r,3r,4s,5r,6e)-3,4,5-trihydroxy-n-[(3s,6s)-2-hydroxy-6-(tridecanoyloxy)-4,5,6,7-tetrahydro-3h-azepin-3-yl]-2-methoxy-8-methylnon-6-enimidic acid
DescriptionCHEMBL462884 belongs to the class of organic compounds known as n-acyl-alpha amino acids and derivatives. N-acyl-alpha amino acids and derivatives are compounds containing an alpha amino acid (or a derivative thereof) which bears an acyl group at its terminal nitrogen atom. (2r,3r,4s,5r,6e)-3,4,5-trihydroxy-n-[(3s,6s)-2-hydroxy-6-(tridecanoyloxy)-4,5,6,7-tetrahydro-3h-azepin-3-yl]-2-methoxy-8-methylnon-6-enimidic acid is found in Rhabdastrella globostellata. Based on a literature review very few articles have been published on CHEMBL462884.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC30H54N2O8
Average Mass570.7680 Da
Monoisotopic Mass570.38802 Da
IUPAC Name(2R,3R,4S,5R,6E)-3,4,5-trihydroxy-N-[(3S,6S)-7-hydroxy-3-(tridecanoyloxy)-3,4,5,6-tetrahydro-2H-azepin-6-yl]-2-methoxy-8-methylnon-6-enimidic acid
Traditional Name(2R,3R,4S,5R,6E)-3,4,5-trihydroxy-N-[(3S,6S)-2-hydroxy-6-(tridecanoyloxy)-4,5,6,7-tetrahydro-3H-azepin-3-yl]-2-methoxy-8-methylnon-6-enimidic acid
CAS Registry NumberNot Available
SMILES
CCCCCCCCCCCCC(=O)O[C@H]1CC[C@H](N=C(O)[C@H](OC)[C@H](O)[C@@H](O)[C@H](O)\C=C\C(C)C)C(O)=NC1
InChI Identifier
InChI=1S/C30H54N2O8/c1-5-6-7-8-9-10-11-12-13-14-15-25(34)40-22-17-18-23(29(37)31-20-22)32-30(38)28(39-4)27(36)26(35)24(33)19-16-21(2)3/h16,19,21-24,26-28,33,35-36H,5-15,17-18,20H2,1-4H3,(H,31,37)(H,32,38)/b19-16+/t22-,23-,24+,26-,27+,28+/m0/s1
InChI KeyPDMKXMFREFJPRT-LEWGKPCESA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Rhabdastrella globostellataLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as n-acyl-alpha amino acids and derivatives. N-acyl-alpha amino acids and derivatives are compounds containing an alpha amino acid (or a derivative thereof) which bears an acyl group at its terminal nitrogen atom.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentN-acyl-alpha amino acids and derivatives
Alternative Parents
Substituents
  • N-acyl-alpha amino acid or derivatives
  • Caprolactam
  • Azepane
  • Fatty acid ester
  • Fatty amide
  • Monosaccharide
  • Fatty acyl
  • N-acyl-amine
  • 1,2-diol
  • Carboxamide group
  • Carboxylic acid ester
  • Lactam
  • Secondary carboxylic acid amide
  • Secondary alcohol
  • Azacycle
  • Monocarboxylic acid or derivatives
  • Ether
  • Dialkyl ether
  • Organoheterocyclic compound
  • Polyol
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Alcohol
  • Organic oxygen compound
  • Organonitrogen compound
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.27ChemAxon
pKa (Strongest Acidic)2.23ChemAxon
pKa (Strongest Basic)4.67ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count9ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area161.4 ŲChemAxon
Rotatable Bond Count21ChemAxon
Refractivity154.32 m³·mol⁻¹ChemAxon
Polarizability64.78 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID10282311
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound21672093
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. LOTUS database [Link]