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Record Information
Version2.0
Created at2022-09-04 20:38:33 UTC
Updated at2022-09-04 20:38:34 UTC
NP-MRD IDNP0201567
Secondary Accession NumbersNone
Natural Product Identification
Common Name(9s,15r,17s)-4-hydroxy-5-methoxy-2,18-dioxa-10-azapentacyclo[20.2.2.1⁹,¹⁷.0³,⁸.0¹⁰,¹⁵]heptacosa-1(24),3,5,7,22,25-hexaen-19-one
DescriptionLagerine belongs to the class of organic compounds known as macrolides and analogues. These are organic compounds containing a lactone ring of at least twelve members. (9s,15r,17s)-4-hydroxy-5-methoxy-2,18-dioxa-10-azapentacyclo[20.2.2.1⁹,¹⁷.0³,⁸.0¹⁰,¹⁵]heptacosa-1(24),3,5,7,22,25-hexaen-19-one is found in Lagerstroemia indica. (9s,15r,17s)-4-hydroxy-5-methoxy-2,18-dioxa-10-azapentacyclo[20.2.2.1⁹,¹⁷.0³,⁸.0¹⁰,¹⁵]heptacosa-1(24),3,5,7,22,25-hexaen-19-one was first documented in 2009 (PMID: 19260657). Based on a literature review very few articles have been published on Lagerine (PMID: 21796576).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC25H29NO5
Average Mass423.5090 Da
Monoisotopic Mass423.20457 Da
IUPAC Name(9S,15R,17S)-4-hydroxy-5-methoxy-2,18-dioxa-10-azapentacyclo[20.2.2.1^{9,17}.0^{3,8}.0^{10,15}]heptacosa-1(24),3,5,7,22,25-hexaen-19-one
Traditional Name(9S,15R,17S)-4-hydroxy-5-methoxy-2,18-dioxa-10-azapentacyclo[20.2.2.1^{9,17}.0^{3,8}.0^{10,15}]heptacosa-1(24),3,5,7,22,25-hexaen-19-one
CAS Registry NumberNot Available
SMILES
COC1=CC=C2[C@@H]3C[C@H](C[C@H]4CCCCN34)OC(=O)CCC3=CC=C(OC2=C1O)C=C3
InChI Identifier
InChI=1S/C25H29NO5/c1-29-22-11-10-20-21-15-19(14-17-4-2-3-13-26(17)21)30-23(27)12-7-16-5-8-18(9-6-16)31-25(20)24(22)28/h5-6,8-11,17,19,21,28H,2-4,7,12-15H2,1H3/t17-,19+,21+/m1/s1
InChI KeyOBHAUUFTXJOWIW-LMNJBCLMSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Lagerstroemia indicaLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as macrolides and analogues. These are organic compounds containing a lactone ring of at least twelve members.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassMacrolides and analogues
Sub ClassNot Available
Direct ParentMacrolides and analogues
Alternative Parents
Substituents
  • Macrolide
  • Diaryl ether
  • Quinolizidine
  • Anisole
  • Phenol ether
  • Alkyl aryl ether
  • 1-hydroxy-4-unsubstituted benzenoid
  • Phenol
  • Aralkylamine
  • Piperidine
  • Benzenoid
  • Amino acid or derivatives
  • Carboxylic acid ester
  • Lactone
  • Tertiary aliphatic amine
  • Tertiary amine
  • Monocarboxylic acid or derivatives
  • Ether
  • Carboxylic acid derivative
  • Oxacycle
  • Azacycle
  • Organoheterocyclic compound
  • Organooxygen compound
  • Organonitrogen compound
  • Hydrocarbon derivative
  • Organic nitrogen compound
  • Organic oxide
  • Amine
  • Carbonyl group
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.75ChemAxon
pKa (Strongest Acidic)8.97ChemAxon
pKa (Strongest Basic)7.68ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area68.23 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity116.91 m³·mol⁻¹ChemAxon
Polarizability45.41 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00047488
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound101473393
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Lee I, Youn U, Kim H, Min B, Kim JS, Bae K: Biphenyl and biphenyl ether quinolizidine N-oxide alkaloids from Lagerstroemia indica L. Planta Med. 2011 Dec;77(18):2037-41. doi: 10.1055/s-0031-1280064. Epub 2011 Jul 27. [PubMed:21796576 ]
  2. Kim HJ, Lee IS, Youn U, Chen QC, Ngoc TM, Ha do T, Liu H, Min BS, Lee JY, Seong RS, Bae K: Biphenylquinolizidine alkaloids from Lagerstroemia indica. J Nat Prod. 2009 Apr;72(4):749-52. doi: 10.1021/np800619g. [PubMed:19260657 ]
  3. LOTUS database [Link]