NP-MRD: Showing NP-Card for heptacosane-6,8-diol (NP0201109)

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Record Information

Version

2.0

Created at

2022-09-04 20:05:27 UTC

Updated at

2022-09-04 20:05:27 UTC

NP-MRD ID

NP0201109

Secondary Accession Numbers

None

Natural Product Identification

Common Name

heptacosane-6,8-diol

Description

Erythro-6,8-Heptacosanediol, also known as heptacosane-68-diol or erythro-form, belongs to the class of organic compounds known as fatty alcohols. These are aliphatic alcohols consisting of a chain of a least six carbon atoms. Thus, erythro-6,8-heptacosanediol is considered to be a fatty alcohol lipid molecule. Erythro-6,8-Heptacosanediol is a very hydrophobic molecule, practically insoluble (in water), and relatively neutral. Outside of the human body, erythro-6,8-Heptacosanediol has been detected, but not quantified in, fats and oils and herbs and spices. heptacosane-6,8-diol is found in Carthamus tinctorius. This could make erythro-6,8-heptacosanediol a potential biomarker for the consumption of these foods.

Structure

MOL 3D MOL SDF PDB SMILES InChI

  Mrv0541 05061312222D          

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M  END

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M  END

  Mrv0541 05061312222D          

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M  END
> <DATABASE_ID>
NP0201109

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCCCCCCCCCCCCCCCCCCC(O)CC(O)CCCCC

> <INCHI_IDENTIFIER>
InChI=1S/C27H56O2/c1-3-5-7-8-9-10-11-12-13-14-15-16-17-18-19-20-22-24-27(29)25-26(28)23-21-6-4-2/h26-29H,3-25H2,1-2H3

> <INCHI_KEY>
VOOVQMDKNDAOJU-UHFFFAOYSA-N

> <FORMULA>
C27H56O2

> <MOLECULAR_WEIGHT>
412.7323

> <EXACT_MASS>
412.428031036

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_AVERAGE_POLARIZABILITY>
57.77197723743308

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
heptacosane-6,8-diol

> <ALOGPS_LOGP>
9.33

> <JCHEM_LOGP>
9.620848797666667

> <ALOGPS_LOGS>
-7.01

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
15.580027470301903

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.877221442789168

> <JCHEM_PKA_STRONGEST_BASIC>
-2.720832777780089

> <JCHEM_POLAR_SURFACE_AREA>
40.46

> <JCHEM_REFRACTIVITY>
129.32459999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
24

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
4.07e-05 g/l

> <JCHEM_TRADITIONAL_IUPAC>
heptacosane-6,8-diol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0     -22.124  12.773   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      12.552  12.773   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0     -20.790  12.003   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      11.218  12.003   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0     -19.456  12.773   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       9.885  12.773   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0     -18.123  12.003   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0     -16.789  12.773   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0     -15.455  12.003   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0     -14.122  12.773   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0     -12.788  12.003   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0     -11.454  12.773   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0     -10.121  12.003   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -8.787  12.773   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -7.453  12.003   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -6.119  12.773   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -4.786  12.003   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -3.452  12.773   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -2.118  12.003   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -0.785  12.773   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       8.551  12.003   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       0.549  12.003   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       7.217  12.773   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       1.883  12.773   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       4.550  12.773   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       5.884  12.003   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       3.216  12.003   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       5.884  10.463   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0       3.216  10.463   0.000  0.00  0.00           O+0
CONECT    1    3                                                            
CONECT    2    4                                                            
CONECT    3    1    5                                                       
CONECT    4    2    6                                                       
CONECT    5    3    7                                                       
CONECT    6    4   21                                                       
CONECT    7    5    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   22                                                       
CONECT   21    6   23                                                       
CONECT   22   20   24                                                       
CONECT   23   21   26                                                       
CONECT   24   22   27                                                       
CONECT   25   26   27                                                       
CONECT   26   23   25   28                                                  
CONECT   27   24   25   29                                                  
CONECT   28   26                                                            
CONECT   29   27                                                            
MASTER        0    0    0    0    0    0    0    0   29    0   56    0
END

View in JSmol

Synonyms

Value	Source
Heptacosane-68-diol	HMDB
6,8-Heptacosanediol	HMDB
Erythro-form	HMDB

Chemical Formula

C₂₇H₅₆O₂

Average Mass

412.7323 Da

Monoisotopic Mass

412.42803 Da

IUPAC Name

heptacosane-6,8-diol

Traditional Name

heptacosane-6,8-diol

CAS Registry Number

Not Available

SMILES

CCCCCCCCCCCCCCCCCCCC(O)CC(O)CCCCC

InChI Identifier

InChI=1S/C27H56O2/c1-3-5-7-8-9-10-11-12-13-14-15-16-17-18-19-20-22-24-27(29)25-26(28)23-21-6-4-2/h26-29H,3-25H2,1-2H3

InChI Key

VOOVQMDKNDAOJU-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Carthamus tinctorius	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as fatty alcohols. These are aliphatic alcohols consisting of a chain of a least six carbon atoms.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty alcohols

Direct Parent

Fatty alcohols

Alternative Parents

Substituents

Fatty alcohol
Secondary alcohol
Organic oxygen compound
Hydrocarbon derivative
Organooxygen compound
Alcohol
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	9.33	ALOGPS
logP	9.62	ChemAxon
logS	-7	ALOGPS
pKa (Strongest Acidic)	14.88	ChemAxon
pKa (Strongest Basic)	-2.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	40.46 Å²	ChemAxon
Rotatable Bond Count	24	ChemAxon
Refractivity	129.32 m³·mol⁻¹	ChemAxon
Polarizability	57.77 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

HMDB0041071

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

FDB020946

KNApSAcK ID

Not Available

Chemspider ID

8562444

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10387002

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for heptacosane-6,8-diol (NP0201109)

MOL for NP0201109 (heptacosane-6,8-diol)

3D MOL for NP0201109 (heptacosane-6,8-diol)

3D SDF for NP0201109 (heptacosane-6,8-diol)

3D-SDF for NP0201109 (heptacosane-6,8-diol)

PDB for NP0201109 (heptacosane-6,8-diol)

3D PDB for NP0201109 (heptacosane-6,8-diol)

SMILES for NP0201109 (heptacosane-6,8-diol)

INCHI for NP0201109 (heptacosane-6,8-diol)

Structure for NP0201109 (heptacosane-6,8-diol)

3D Structure for NP0201109 (heptacosane-6,8-diol)