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Record Information
Version2.0
Created at2022-09-04 14:49:27 UTC
Updated at2022-09-04 14:49:27 UTC
NP-MRD IDNP0196694
Secondary Accession NumbersNone
Natural Product Identification
Common Name(1r,2r,4s,6r,7z,9e,11r)-9-(hydroxymethyl)-4-methyl-14-methylidene-13-oxo-5,12-dioxatricyclo[9.3.0.0⁴,⁶]tetradeca-7,9-dien-2-yl (2z)-2-(hydroxymethyl)but-2-enoate
Description(1R,2R,4S,6R,7Z,9E,11R)-9-(hydroxymethyl)-4-methyl-14-methylidene-13-oxo-5,12-dioxatricyclo[9.3.0.0⁴,⁶]Tetradeca-7,9-dien-2-yl (2Z)-2-(hydroxymethyl)but-2-enoate belongs to the class of organic compounds known as germacranolides and derivatives. These are sesquiterpene lactones with a structure based on the germacranolide skeleton, characterized by a gamma lactone fused to a 1,7-dimethylcyclodec-1-ene moiety. (1r,2r,4s,6r,7z,9e,11r)-9-(hydroxymethyl)-4-methyl-14-methylidene-13-oxo-5,12-dioxatricyclo[9.3.0.0⁴,⁶]tetradeca-7,9-dien-2-yl (2z)-2-(hydroxymethyl)but-2-enoate is found in Liatris punctata. Based on a literature review very few articles have been published on (1R,2R,4S,6R,7Z,9E,11R)-9-(hydroxymethyl)-4-methyl-14-methylidene-13-oxo-5,12-dioxatricyclo[9.3.0.0⁴,⁶]Tetradeca-7,9-dien-2-yl (2Z)-2-(hydroxymethyl)but-2-enoate.
Structure
Thumb
Synonyms
ValueSource
(1R,2R,4S,6R,7Z,9E,11R)-9-(Hydroxymethyl)-4-methyl-14-methylidene-13-oxo-5,12-dioxatricyclo[9.3.0.0,]tetradeca-7,9-dien-2-yl (2Z)-2-(hydroxymethyl)but-2-enoic acidGenerator
Chemical FormulaC20H24O7
Average Mass376.4050 Da
Monoisotopic Mass376.15220 Da
IUPAC Name(1R,2R,4S,6R,7Z,9E,11R)-9-(hydroxymethyl)-4-methyl-14-methylidene-13-oxo-5,12-dioxatricyclo[9.3.0.0^{4,6}]tetradeca-7,9-dien-2-yl (2Z)-2-(hydroxymethyl)but-2-enoate
Traditional Name(1R,2R,4S,6R,7Z,9E,11R)-9-(hydroxymethyl)-4-methyl-14-methylidene-13-oxo-5,12-dioxatricyclo[9.3.0.0^{4,6}]tetradeca-7,9-dien-2-yl (2Z)-2-(hydroxymethyl)but-2-enoate
CAS Registry NumberNot Available
SMILES
C\C=C(\CO)C(=O)O[C@@H]1C[C@]2(C)O[C@@H]2\C=C/C(/CO)=C\[C@H]2OC(=O)C(=C)[C@H]12
InChI Identifier
InChI=1S/C20H24O7/c1-4-13(10-22)19(24)26-15-8-20(3)16(27-20)6-5-12(9-21)7-14-17(15)11(2)18(23)25-14/h4-7,14-17,21-22H,2,8-10H2,1,3H3/b6-5-,12-7+,13-4-/t14-,15-,16-,17+,20+/m1/s1
InChI KeyPJPPGFOTUNLSNL-UDZDNJAQSA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Liatris punctataLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as germacranolides and derivatives. These are sesquiterpene lactones with a structure based on the germacranolide skeleton, characterized by a gamma lactone fused to a 1,7-dimethylcyclodec-1-ene moiety.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTerpene lactones
Direct ParentGermacranolides and derivatives
Alternative Parents
Substituents
  • Germacranolide
  • Sesquiterpenoid
  • Fatty acid ester
  • Beta-hydroxy acid
  • Fatty acyl
  • Hydroxy acid
  • Gamma butyrolactone
  • Dicarboxylic acid or derivatives
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Tetrahydrofuran
  • Lactone
  • Carboxylic acid ester
  • Oxacycle
  • Organoheterocyclic compound
  • Ether
  • Oxirane
  • Dialkyl ether
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Primary alcohol
  • Organooxygen compound
  • Carbonyl group
  • Alcohol
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.94ChemAxon
pKa (Strongest Acidic)14.69ChemAxon
pKa (Strongest Basic)-2.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area105.59 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity98.58 m³·mol⁻¹ChemAxon
Polarizability38.52 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound163195295
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. LOTUS database [Link]