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Record Information
Version2.0
Created at2022-09-04 14:35:13 UTC
Updated at2022-09-04 14:35:14 UTC
NP-MRD IDNP0196484
Secondary Accession NumbersNone
Natural Product Identification
Common Name(1r,2r,4as,8as)-1-[(3e)-6-[(1s)-2,2-dimethyl-6-methylidenecyclohexyl]-4-methylhex-3-en-1-yl]-2,5,5,8a-tetramethyl-hexahydro-1h-naphthalen-2-ol
DescriptionAMBREIN belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. (1r,2r,4as,8as)-1-[(3e)-6-[(1s)-2,2-dimethyl-6-methylidenecyclohexyl]-4-methylhex-3-en-1-yl]-2,5,5,8a-tetramethyl-hexahydro-1h-naphthalen-2-ol is found in Physeter catodon. (1r,2r,4as,8as)-1-[(3e)-6-[(1s)-2,2-dimethyl-6-methylidenecyclohexyl]-4-methylhex-3-en-1-yl]-2,5,5,8a-tetramethyl-hexahydro-1h-naphthalen-2-ol was first documented in 2007 (PMID: 17408835). Based on a literature review a significant number of articles have been published on AMBREIN (PMID: 24274794) (PMID: 33184314) (PMID: 32854176) (PMID: 32178531) (PMID: 31797886) (PMID: 31606910).
Structure
Thumb
Synonyms
ValueSource
1-(6-(2,2-Dimethyl-6-methylenecyclohexyl)-4-methyl-3-hexenyl)decahydro-2,5,5,8a-tetramethyl-2-naphthalenolMeSH
Chemical FormulaC30H52O
Average Mass428.7450 Da
Monoisotopic Mass428.40182 Da
IUPAC Name(1R,2R,4aS,8aS)-1-[(3E)-6-[(1S)-2,2-dimethyl-6-methylidenecyclohexyl]-4-methylhex-3-en-1-yl]-2,5,5,8a-tetramethyl-decahydronaphthalen-2-ol
Traditional Name(1R,2R,4aS,8aS)-1-[(3E)-6-[(1S)-2,2-dimethyl-6-methylidenecyclohexyl]-4-methylhex-3-en-1-yl]-2,5,5,8a-tetramethyl-hexahydro-1H-naphthalen-2-ol
CAS Registry NumberNot Available
SMILES
C\C(CC[C@@H]1C(=C)CCCC1(C)C)=C/CC[C@H]1[C@](C)(O)CC[C@H]2C(C)(C)CCC[C@]12C
InChI Identifier
InChI=1S/C30H52O/c1-22(15-16-24-23(2)13-10-18-27(24,3)4)12-9-14-26-29(7)20-11-19-28(5,6)25(29)17-21-30(26,8)31/h12,24-26,31H,2,9-11,13-21H2,1,3-8H3/b22-12+/t24-,25+,26-,29+,30-/m1/s1
InChI KeyBIADSXOKHZFLSN-RMCJHQKMSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Physeter catodonLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTriterpenoids
Direct ParentTriterpenoids
Alternative Parents
Substituents
  • Triterpenoid
  • Tertiary alcohol
  • Cyclic alcohol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Alcohol
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP8.49ChemAxon
pKa (Strongest Basic)-0.44ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area20.23 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity135.89 m³·mol⁻¹ChemAxon
Polarizability55.45 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00023426
Chemspider ID10275828
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound12305858
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Ueda D, Hoshino T, Sato T: Cyclization of squalene from both termini: identification of an onoceroid synthase and enzymatic synthesis of ambrein. J Am Chem Soc. 2013 Dec 11;135(49):18335-8. doi: 10.1021/ja4107226. Epub 2013 Nov 27. [PubMed:24274794 ]
  2. Yamabe Y, Kawagoe Y, Okuno K, Inoue M, Chikaoka K, Ueda D, Tajima Y, Yamada TK, Kakihara Y, Hara T, Sato T: Construction of an artificial system for ambrein biosynthesis and investigation of some biological activities of ambrein. Sci Rep. 2020 Nov 12;10(1):19643. doi: 10.1038/s41598-020-76624-y. [PubMed:33184314 ]
  3. Ncube EN, Steenkamp L, Dubery IA: Ambrafuran (Ambrox(TM)) Synthesis from Natural Plant Product Precursors. Molecules. 2020 Aug 25;25(17):3851. doi: 10.3390/molecules25173851. [PubMed:32854176 ]
  4. Rowland SJ, Sutton PA, von der Luhe B, Volkman JK, Vane CH, Ingram SN, Dunn C, Claridge D: Ambrein: a minor, but common constituent of mammalian faeces? Nat Prod Res. 2021 Nov;35(22):4843-4848. doi: 10.1080/14786419.2020.1731746. Epub 2020 Mar 17. [PubMed:32178531 ]
  5. von der Luhe B, Mayes RW, Thiel V, Dawson LA, Graw M, Rowland SJ, Fiedler S: First evidence of terrestrial ambrein formation in human adipocere. Sci Rep. 2019 Dec 4;9(1):18370. doi: 10.1038/s41598-019-54730-w. [PubMed:31797886 ]
  6. Moser S, Leitner E, Plocek TJ, Vanhessche K, Pichler H: Engineering of Saccharomyces cerevisiae for the production of (+)-ambrein. Yeast. 2020 Jan;37(1):163-172. doi: 10.1002/yea.3444. Epub 2019 Oct 27. [PubMed:31606910 ]
  7. Rowland SJ, Sutton PA, Wolff GA: Biosynthesis of ambrein in ambergris: evidence from isotopic data and identification of possible intermediates. Nat Prod Res. 2021 Apr;35(8):1235-1241. doi: 10.1080/14786419.2019.1644630. Epub 2019 Jul 30. [PubMed:31359775 ]
  8. Moser S, Strohmeier GA, Leitner E, Plocek TJ, Vanhessche K, Pichler H: Whole-cell (+)-ambrein production in the yeast Pichia pastoris. Metab Eng Commun. 2018 Aug 16;7:e00077. doi: 10.1016/j.mec.2018.e00077. eCollection 2018 Dec. [PubMed:30197866 ]
  9. Rowland SJ, Sutton PA, Belt ST, Fitzsimmons-Thoss V, Scarlett AG: Further spectral and chromatographic studies of ambergris. Nat Prod Res. 2018 Nov;32(21):2603-2609. doi: 10.1080/14786419.2018.1428599. Epub 2018 Jan 22. [PubMed:29355034 ]
  10. Ke D, Caiyin Q, Zhao F, Liu T, Lu W: Heterologous biosynthesis of triterpenoid ambrein in engineered Escherichia coli. Biotechnol Lett. 2018 Feb;40(2):399-404. doi: 10.1007/s10529-017-2483-2. Epub 2017 Dec 4. [PubMed:29204767 ]
  11. Rowland SJ, Sutton PA: Chromatographic and spectral studies of jetsam and archived ambergris. Nat Prod Res. 2017 Aug;31(15):1752-1757. doi: 10.1080/14786419.2017.1290618. Epub 2017 Feb 16. [PubMed:28278659 ]
  12. Raza M, Alorainy MS, Alghasham AA: Evaluation of ambrein and epicoprostanol for their antioxidant properties: protection against adriamycin-induced free radical toxicity. Food Chem Toxicol. 2007 Sep;45(9):1614-9. doi: 10.1016/j.fct.2007.02.024. Epub 2007 Feb 28. [PubMed:17408835 ]
  13. Shen YC, Cheng SY, Kuo YH, Hwang TL, Chiang MY, Khalil AT: Chemical transformation and biological activities of ambrein, a major product of ambergris from Physeter macrocephalus (sperm whale). J Nat Prod. 2007 Feb;70(2):147-53. doi: 10.1021/np068029p. [PubMed:17315955 ]
  14. LOTUS database [Link]