NP-MRD: Showing NP-Card for [(4ar,5s,9ar)-4a-{[(4ar,5s,9ar)-2-(hydroxymethyl)-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-4a-yl]oxy}-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-2-yl]methanol (NP0194918)

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Record Information

Version

2.0

Created at

2022-09-04 12:40:57 UTC

Updated at

2022-09-04 12:40:57 UTC

NP-MRD ID

NP0194918

Secondary Accession Numbers

None

Natural Product Identification

Common Name

[(4ar,5s,9ar)-4a-{[(4ar,5s,9ar)-2-(hydroxymethyl)-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-4a-yl]oxy}-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-2-yl]methanol

Description

Chinensiol belongs to the class of organic compounds known as himachalane and lippifoliane sesquiterpenoids. These are sesquiterpenoids with a structure based on either the himachalane or the lippifoliane skeleton. Thus, chinensiol is considered to be an isoprenoid. [(4ar,5s,9ar)-4a-{[(4ar,5s,9ar)-2-(hydroxymethyl)-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-4a-yl]oxy}-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-2-yl]methanol is found in Juniperus chinensis. Based on a literature review very few articles have been published on Chinensiol.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309042214402D          

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M  END

     RDKit          3D

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M  END


  Mrv1652309042214402D          

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    1.7906    0.8059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0408   -0.0725    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3988   -0.8158    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0408   -1.5591    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2365   -1.7427    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.0136   -2.3804    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  6  9  1  0  0  0  0
  9 10  1  1  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 11 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
  2 16  1  0  0  0  0
  9 16  1  0  0  0  0
 16 17  1  6  0  0  0
 18 17  1  1  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 21 24  2  0  0  0  0
 25 24  1  6  0  0  0
 18 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 26 28  1  0  0  0  0
 26 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 18 32  1  0  0  0  0
 32 33  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0194918

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@H]1CCCC(C)(C)[C@H]2C=C(CO)CC[C@@]12O[C@@]12CCC(CO)=C[C@@H]1C(C)(C)CCC[C@@H]2C

> <INCHI_IDENTIFIER>
InChI=1S/C30H50O3/c1-21-9-7-13-27(3,4)25-17-23(19-31)11-15-29(21,25)33-30-16-12-24(20-32)18-26(30)28(5,6)14-8-10-22(30)2/h17-18,21-22,25-26,31-32H,7-16,19-20H2,1-6H3/t21-,22-,25+,26+,29+,30+/m0/s1

> <INCHI_KEY>
FFMWOMGSIICTOY-SOXAYEJESA-N

> <FORMULA>
C30H50O3

> <MOLECULAR_WEIGHT>
458.727

> <EXACT_MASS>
458.37599547

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
83

> <JCHEM_AVERAGE_POLARIZABILITY>
54.863061941037024

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
[(4aR,9S,9aR)-9a-{[(4aR,9S,9aR)-3-(hydroxymethyl)-5,5,9-trimethyl-2,4a,5,6,7,8,9,9a-octahydro-1H-benzo[7]annulen-9a-yl]oxy}-5,5,9-trimethyl-2,4a,5,6,7,8,9,9a-octahydro-1H-benzo[7]annulen-3-yl]methanol

> <JCHEM_LOGP>
6.015472134333333

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
16.828060400069198

> <JCHEM_PKA_STRONGEST_ACIDIC>
16.828060400069198

> <JCHEM_PKA_STRONGEST_BASIC>
-1.6968789372893487

> <JCHEM_POLAR_SURFACE_AREA>
49.69

> <JCHEM_REFRACTIVITY>
138.4453

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
[(4aR,5S,9aR)-4a-{[(4aR,5S,9aR)-2-(hydroxymethyl)-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3H-benzo[7]annulen-4a-yl]oxy}-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3H-benzo[7]annulen-2-yl]methanol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 04-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   04-SEP-22         0                                  
HETATM    1  C   UNK     0       2.512  -4.849   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.935  -5.267   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       1.165  -6.789   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       0.117  -7.918   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -1.418  -7.803   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -2.286  -6.531   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -3.333  -7.660   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -3.620  -5.761   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.832  -5.059   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -3.036  -4.099   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -2.806  -2.576   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -4.114  -1.763   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0      -5.472  -2.489   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0      -1.349  -1.797   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -0.120  -2.541   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -0.398  -4.497   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       1.148  -4.061   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       1.104  -2.293   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -0.230  -3.063   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -1.563  -2.293   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -1.563  -0.753   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -3.156   0.100   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      -4.782  -0.125   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0      -0.230   0.017   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       1.104  -0.753   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       2.308   0.207   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       1.625   1.693   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       3.343   1.504   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       3.810  -0.135   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       4.478  -1.523   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       3.810  -2.910   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       2.308  -3.253   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       3.759  -4.443   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   16                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7    8    9                                             
CONECT    7    6                                                            
CONECT    8    6                                                            
CONECT    9    6   10   16                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12   14                                                  
CONECT   12   11   13                                                       
CONECT   13   12                                                            
CONECT   14   11   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15    2    9   17                                             
CONECT   17   16   18                                                       
CONECT   18   17   19   25   32                                             
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22   24                                                  
CONECT   22   21   23                                                       
CONECT   23   22                                                            
CONECT   24   21   25                                                       
CONECT   25   24   18   26                                                  
CONECT   26   25   27   28   29                                             
CONECT   27   26                                                            
CONECT   28   26                                                            
CONECT   29   26   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   18   33                                                  
CONECT   33   32                                                            
MASTER        0    0    0    0    0    0    0    0   33    0   72    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₀H₅₀O₃

Average Mass

458.7270 Da

Monoisotopic Mass

458.37600 Da

IUPAC Name

[(4aR,9S,9aR)-9a-{[(4aR,9S,9aR)-3-(hydroxymethyl)-5,5,9-trimethyl-2,4a,5,6,7,8,9,9a-octahydro-1H-benzo[7]annulen-9a-yl]oxy}-5,5,9-trimethyl-2,4a,5,6,7,8,9,9a-octahydro-1H-benzo[7]annulen-3-yl]methanol

Traditional Name

[(4aR,5S,9aR)-4a-{[(4aR,5S,9aR)-2-(hydroxymethyl)-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3H-benzo[7]annulen-4a-yl]oxy}-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3H-benzo[7]annulen-2-yl]methanol

CAS Registry Number

Not Available

SMILES

C[C@H]1CCCC(C)(C)[C@H]2C=C(CO)CC[C@@]12O[C@@]12CCC(CO)=C[C@@H]1C(C)(C)CCC[C@@H]2C

InChI Identifier

InChI=1S/C30H50O3/c1-21-9-7-13-27(3,4)25-17-23(19-31)11-15-29(21,25)33-30-16-12-24(20-32)18-26(30)28(5,6)14-8-10-22(30)2/h17-18,21-22,25-26,31-32H,7-16,19-20H2,1-6H3/t21-,22-,25+,26+,29+,30+/m0/s1

InChI Key

FFMWOMGSIICTOY-SOXAYEJESA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Juniperus chinensis	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as himachalane and lippifoliane sesquiterpenoids. These are sesquiterpenoids with a structure based on either the himachalane or the lippifoliane skeleton.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Sesquiterpenoids

Direct Parent

Himachalane and lippifoliane sesquiterpenoids

Alternative Parents

Substituents

Himachalane sesquiterpenoid
Ether
Dialkyl ether
Organic oxygen compound
Hydrocarbon derivative
Primary alcohol
Organooxygen compound
Alcohol
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	6.02	ChemAxon
pKa (Strongest Acidic)	16.83	ChemAxon
pKa (Strongest Basic)	-1.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	49.69 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	138.45 m³·mol⁻¹	ChemAxon
Polarizability	54.86 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00033715

Chemspider ID

113385702

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

100936705

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for [(4ar,5s,9ar)-4a-{[(4ar,5s,9ar)-2-(hydroxymethyl)-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-4a-yl]oxy}-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-2-yl]methanol (NP0194918)

MOL for NP0194918 ([(4ar,5s,9ar)-4a-{[(4ar,5s,9ar)-2-(hydroxymethyl)-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-4a-yl]oxy}-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-2-yl]methanol)

3D MOL for NP0194918 ([(4ar,5s,9ar)-4a-{[(4ar,5s,9ar)-2-(hydroxymethyl)-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-4a-yl]oxy}-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-2-yl]methanol)

3D SDF for NP0194918 ([(4ar,5s,9ar)-4a-{[(4ar,5s,9ar)-2-(hydroxymethyl)-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-4a-yl]oxy}-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-2-yl]methanol)

3D-SDF for NP0194918 ([(4ar,5s,9ar)-4a-{[(4ar,5s,9ar)-2-(hydroxymethyl)-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-4a-yl]oxy}-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-2-yl]methanol)

PDB for NP0194918 ([(4ar,5s,9ar)-4a-{[(4ar,5s,9ar)-2-(hydroxymethyl)-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-4a-yl]oxy}-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-2-yl]methanol)

3D PDB for NP0194918 ([(4ar,5s,9ar)-4a-{[(4ar,5s,9ar)-2-(hydroxymethyl)-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-4a-yl]oxy}-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-2-yl]methanol)

SMILES for NP0194918 ([(4ar,5s,9ar)-4a-{[(4ar,5s,9ar)-2-(hydroxymethyl)-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-4a-yl]oxy}-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-2-yl]methanol)

INCHI for NP0194918 ([(4ar,5s,9ar)-4a-{[(4ar,5s,9ar)-2-(hydroxymethyl)-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-4a-yl]oxy}-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-2-yl]methanol)

Structure for NP0194918 ([(4ar,5s,9ar)-4a-{[(4ar,5s,9ar)-2-(hydroxymethyl)-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-4a-yl]oxy}-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-2-yl]methanol)

3D Structure for NP0194918 ([(4ar,5s,9ar)-4a-{[(4ar,5s,9ar)-2-(hydroxymethyl)-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-4a-yl]oxy}-5,9,9-trimethyl-4,5,6,7,8,9a-hexahydro-3h-benzo[7]annulen-2-yl]methanol)