NP-MRD: Showing NP-Card for (3e,5r,6s,9r,14s)-5-hydroxy-6,14-dimethyl-9-[(3e)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione (NP0194836)

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Record Information

Version

2.0

Created at

2022-09-04 12:35:05 UTC

Updated at

2022-09-04 12:35:05 UTC

NP-MRD ID

NP0194836

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(3e,5r,6s,9r,14s)-5-hydroxy-6,14-dimethyl-9-[(3e)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione

Description

Acaulone A belongs to the class of organic compounds known as macrolides and analogues. These are organic compounds containing a lactone ring of at least twelve members. (3e,5r,6s,9r,14s)-5-hydroxy-6,14-dimethyl-9-[(3e)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione was first documented in 2020 (PMID: 32619097). Based on a literature review very few articles have been published on Acaulone A (PMID: 34980745).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309042214352D          

 26 26  0  0  1  0            999 V2000
    2.5788    4.4844    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3807    3.6836    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5880    3.4548    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3899    2.6539    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5972    2.4251    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9843    2.0819    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7862    1.2810    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3807    0.7090    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1733    0.9378    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3714    1.7387    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7678    0.3658    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5696   -0.4351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7770   -0.6639    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1825   -0.0918    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5788   -1.4647    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7862   -1.6935    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5880   -2.4944    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1917   -1.1215    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3991   -1.3503    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1954   -0.7783    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.9880   -1.0071    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0028    0.0226    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5917    0.5946    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7954    0.2514    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9935    1.0522    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3991    1.6243    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  4  6  1  0  0  0  0
  7  6  1  1  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  1  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  1  0  0  0
 20 22  1  0  0  0  0
 22 23  1  6  0  0  0
 22 24  1  0  0  0  0
 24 25  1  0  0  0  0
  7 25  1  0  0  0  0
 25 26  2  0  0  0  0
M  END

     RDKit          3D

 52 52  0  0  0  0  0  0  0  0999 V2000
    7.0404   -1.1429    0.9529 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6315   -0.8380    0.5945 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0439    0.3150    0.8514 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6675    0.6075    0.4990 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1821    1.7327    0.7799 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7931   -0.3722   -0.1870 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4017    0.2252   -0.4348 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5860   -0.8166   -1.1259 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0611   -1.8865   -0.2715 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7357   -2.4404    0.5985 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3470   -2.3380   -0.4486 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1379   -1.9965    0.7711 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5226   -1.4895    0.4476 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.3704   -2.7340    0.1465 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5856   -0.6887   -0.7048 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3773    0.4622   -0.8448 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2911    0.5394   -1.7448 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2284    1.6419    0.0057 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1025    2.2537    0.2827 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7756    1.8144   -0.2517 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.7618    1.9332   -1.6621 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6544    2.6516    0.2606 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0063    3.4761   -0.8545 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3655    1.9909    0.9230 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8286    0.7181    0.8370 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8129   -0.1139    1.7853 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.6564   -0.2339    1.0505 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5157   -1.8189    0.2247 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1039   -1.6645    1.9378 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0653   -1.6086    0.0970 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6509    1.0559    1.3517 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7483   -1.2724    0.4482 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2778   -0.6423   -1.1422 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5770    1.0432   -1.1644 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1807   -1.3182   -1.9527 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2690   -0.3574   -1.6831 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7837   -1.9616   -1.3952 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2907   -3.4542   -0.5799 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2991   -2.9409    1.3723 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6314   -1.3070    1.4694 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9351   -1.0376    1.3463 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9342   -3.6228    0.6678 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3349   -2.9750   -0.9426 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4043   -2.6237    0.5281 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1664    2.0347    0.4412 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0938    3.1211    0.9270 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6301    0.7377   -0.0415 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2975    2.7407   -1.8586 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1255    3.4387    0.9277 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1794    2.8936   -1.7572 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6742    4.3395   -1.0754 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9125    3.9290   -0.4020 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  4  5  2  0
  4  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 13 15  1  0
 15 16  1  0
 16 17  2  0
 16 18  1  0
 18 19  2  0
 19 20  1  0
 20 21  1  0
 20 22  1  0
 22 23  1  0
 22 24  1  0
 24 25  1  0
 25 26  2  0
 25  7  1  0
  1 27  1  0
  1 28  1  0
  1 29  1  0
  2 30  1  0
  3 31  1  0
  6 32  1  0
  6 33  1  0
  7 34  1  6
  8 35  1  0
  8 36  1  0
 11 37  1  0
 11 38  1  0
 12 39  1  0
 12 40  1  0
 13 41  1  1
 14 42  1  0
 14 43  1  0
 14 44  1  0
 18 45  1  0
 19 46  1  0
 20 47  1  6
 21 48  1  0
 22 49  1  1
 23 50  1  0
 23 51  1  0
 23 52  1  0
M  END


  Mrv1652309042214352D          

 26 26  0  0  1  0            999 V2000
    2.5788    4.4844    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3807    3.6836    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5880    3.4548    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3899    2.6539    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5972    2.4251    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9843    2.0819    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7862    1.2810    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3807    0.7090    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1733    0.9378    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3714    1.7387    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7678    0.3658    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5696   -0.4351    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7770   -0.6639    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1825   -0.0918    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5788   -1.4647    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7862   -1.6935    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5880   -2.4944    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1917   -1.1215    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3991   -1.3503    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1954   -0.7783    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.9880   -1.0071    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0028    0.0226    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5917    0.5946    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7954    0.2514    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9935    1.0522    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3991    1.6243    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  4  6  1  0  0  0  0
  7  6  1  1  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  1  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  1  0  0  0
 20 22  1  0  0  0  0
 22 23  1  6  0  0  0
 22 24  1  0  0  0  0
 24 25  1  0  0  0  0
  7 25  1  0  0  0  0
 25 26  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0194836

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C\C=C\C(=O)C[C@H]1CC(=O)CC[C@H](C)OC(=O)\C=C\[C@@H](O)[C@H](C)OC1=O

> <INCHI_IDENTIFIER>
InChI=1S/C19H26O7/c1-4-5-15(20)10-14-11-16(21)7-6-12(2)25-18(23)9-8-17(22)13(3)26-19(14)24/h4-5,8-9,12-14,17,22H,6-7,10-11H2,1-3H3/b5-4+,9-8+/t12-,13-,14-,17+/m0/s1

> <INCHI_KEY>
LRAXUQXIMIPJFQ-VLHNBJBQSA-N

> <FORMULA>
C19H26O7

> <MOLECULAR_WEIGHT>
366.41

> <EXACT_MASS>
366.167853177

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
52

> <JCHEM_AVERAGE_POLARIZABILITY>
37.999152819469046

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(3E,5R,6S,9R,14S)-5-hydroxy-6,14-dimethyl-9-[(3E)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione

> <JCHEM_LOGP>
2.183336974

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
16.722538676620008

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.748653706842731

> <JCHEM_PKA_STRONGEST_BASIC>
-3.3459155762601602

> <JCHEM_POLAR_SURFACE_AREA>
106.97

> <JCHEM_REFRACTIVITY>
95.51319999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(3E,5R,6S,9R,14S)-5-hydroxy-6,14-dimethyl-9-[(3E)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 04-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   04-SEP-22         0                                  
HETATM    1  C   UNK     0       4.814   8.371   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       4.444   6.876   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.964   6.449   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.594   4.954   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0       1.115   4.527   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0       3.704   3.886   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       3.334   2.391   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       4.444   1.323   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       5.923   1.751   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0       6.293   3.246   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       7.033   0.683   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       6.663  -0.812   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       5.184  -1.239   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       4.074  -0.171   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       4.814  -2.734   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       3.334  -3.161   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       2.964  -4.656   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       2.225  -2.093   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       0.745  -2.521   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -0.365  -1.453   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0      -1.844  -1.880   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       0.005   0.042   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -1.105   1.110   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0       1.485   0.469   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0       1.855   1.964   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       0.745   3.032   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7                                                       
CONECT    7    6    8   25                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16                                                       
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   25                                                       
CONECT   25   24    7   26                                                  
CONECT   26   25                                                            
MASTER        0    0    0    0    0    0    0    0   26    0   52    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₉H₂₆O₇

Average Mass

366.4100 Da

Monoisotopic Mass

366.16785 Da

IUPAC Name

(3E,5R,6S,9R,14S)-5-hydroxy-6,14-dimethyl-9-[(3E)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione

Traditional Name

(3E,5R,6S,9R,14S)-5-hydroxy-6,14-dimethyl-9-[(3E)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione

CAS Registry Number

Not Available

SMILES

C\C=C\C(=O)C[C@H]1CC(=O)CC[C@H](C)OC(=O)\C=C\[C@@H](O)[C@H](C)OC1=O

InChI Identifier

InChI=1S/C19H26O7/c1-4-5-15(20)10-14-11-16(21)7-6-12(2)25-18(23)9-8-17(22)13(3)26-19(14)24/h4-5,8-9,12-14,17,22H,6-7,10-11H2,1-3H3/b5-4+,9-8+/t12-,13-,14-,17+/m0/s1

InChI Key

LRAXUQXIMIPJFQ-VLHNBJBQSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as macrolides and analogues. These are organic compounds containing a lactone ring of at least twelve members.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Macrolides and analogues

Sub Class

Not Available

Direct Parent

Macrolides and analogues

Alternative Parents

Substituents

Macrolide
Dicarboxylic acid or derivatives
Alpha,beta-unsaturated ketone
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Enone
Acryloyl-group
Cyclic ketone
Secondary alcohol
Lactone
Ketone
Carboxylic acid ester
Oxacycle
Organoheterocyclic compound
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Alcohol
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.18	ChemAxon
pKa (Strongest Acidic)	13.75	ChemAxon
pKa (Strongest Basic)	-3.3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	106.97 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	95.51 m³·mol⁻¹	ChemAxon
Polarizability	38 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78439891

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139591122

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Yakushiji F: [Development of Novel Biologically Active Compounds Based on Synthetic Organic Chemistry]. Yakugaku Zasshi. 2022;142(1):1-7. doi: 10.1248/yakushi.21-00196. [PubMed:34980745 ]
Hirabayashi J, Yakushiji F, Katsuyama A, Ichikawa S: Total Synthesis of Acaulide and Acaulone A. Org Lett. 2020 Jul 17;22(14):5545-5549. doi: 10.1021/acs.orglett.0c01907. Epub 2020 Jul 3. [PubMed:32619097 ]
LOTUS database [Link]

Showing NP-Card for (3e,5r,6s,9r,14s)-5-hydroxy-6,14-dimethyl-9-[(3e)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione (NP0194836)

MOL for NP0194836 ((3e,5r,6s,9r,14s)-5-hydroxy-6,14-dimethyl-9-[(3e)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione)

3D MOL for NP0194836 ((3e,5r,6s,9r,14s)-5-hydroxy-6,14-dimethyl-9-[(3e)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione)

3D SDF for NP0194836 ((3e,5r,6s,9r,14s)-5-hydroxy-6,14-dimethyl-9-[(3e)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione)

3D-SDF for NP0194836 ((3e,5r,6s,9r,14s)-5-hydroxy-6,14-dimethyl-9-[(3e)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione)

PDB for NP0194836 ((3e,5r,6s,9r,14s)-5-hydroxy-6,14-dimethyl-9-[(3e)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione)

3D PDB for NP0194836 ((3e,5r,6s,9r,14s)-5-hydroxy-6,14-dimethyl-9-[(3e)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione)

SMILES for NP0194836 ((3e,5r,6s,9r,14s)-5-hydroxy-6,14-dimethyl-9-[(3e)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione)

INCHI for NP0194836 ((3e,5r,6s,9r,14s)-5-hydroxy-6,14-dimethyl-9-[(3e)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione)

Structure for NP0194836 ((3e,5r,6s,9r,14s)-5-hydroxy-6,14-dimethyl-9-[(3e)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione)

3D Structure for NP0194836 ((3e,5r,6s,9r,14s)-5-hydroxy-6,14-dimethyl-9-[(3e)-2-oxopent-3-en-1-yl]-1,7-dioxacyclotetradec-3-ene-2,8,11-trione)