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Record Information
Version2.0
Created at2022-09-04 10:39:43 UTC
Updated at2022-09-04 10:39:44 UTC
NP-MRD IDNP0193260
Secondary Accession NumbersNone
Natural Product Identification
Common Name(1r,2r,6s,8s,10s)-8-methyl-3-methylidene-5,9,15-trioxatetracyclo[11.2.1.0²,⁶.0⁸,¹⁰]hexadec-13(16)-ene-4,14-dione
DescriptionDeoxymikanolide belongs to the class of organic compounds known as gamma butyrolactones. Gamma butyrolactones are compounds containing a gamma butyrolactone moiety, which consists of an aliphatic five-member ring with four carbon atoms, one oxygen atom, and bears a ketone group on the carbon adjacent to the oxygen atom. (1r,2r,6s,8s,10s)-8-methyl-3-methylidene-5,9,15-trioxatetracyclo[11.2.1.0²,⁶.0⁸,¹⁰]hexadec-13(16)-ene-4,14-dione is found in Mikania cordata, Mikania micrantha and Mikania trachypleura. (1r,2r,6s,8s,10s)-8-methyl-3-methylidene-5,9,15-trioxatetracyclo[11.2.1.0²,⁶.0⁸,¹⁰]hexadec-13(16)-ene-4,14-dione was first documented in 2005 (PMID: 16222800). Based on a literature review a significant number of articles have been published on Deoxymikanolide (PMID: 33838704) (PMID: 31156427) (PMID: 30668348) (PMID: 28945741) (PMID: 27764958) (PMID: 24098556).
Structure
Thumb
Synonyms
ValueSource
(1,10-Epoxy-4,11(13)-germacradiene12,8-15,6-diolide)MeSH
Deoxy-mikanolideMeSH
Chemical FormulaC15H16O5
Average Mass276.2880 Da
Monoisotopic Mass276.09977 Da
IUPAC Name(1R,2R,6S,8S,10S)-8-methyl-3-methylidene-5,9,15-trioxatetracyclo[11.2.1.0^{2,6}.0^{8,10}]hexadec-13(16)-ene-4,14-dione
Traditional Name(1R,2R,6S,8S,10S)-8-methyl-3-methylidene-5,9,15-trioxatetracyclo[11.2.1.0^{2,6}.0^{8,10}]hexadec-13(16)-ene-4,14-dione
CAS Registry NumberNot Available
SMILES
C[C@]12C[C@@H]3OC(=O)C(=C)[C@H]3[C@@H]3OC(=O)C(CC[C@@H]1O2)=C3
InChI Identifier
InChI=1S/C15H16O5/c1-7-12-9-5-8(14(17)18-9)3-4-11-15(2,20-11)6-10(12)19-13(7)16/h5,9-12H,1,3-4,6H2,2H3/t9-,10+,11+,12+,15+/m1/s1
InChI KeyXASRCIGCTSZFAS-SQRMYFJTSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Mikania cordataLOTUS Database
Mikania micranthaLOTUS Database
Mikania trachypleuraLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as gamma butyrolactones. Gamma butyrolactones are compounds containing a gamma butyrolactone moiety, which consists of an aliphatic five-member ring with four carbon atoms, one oxygen atom, and bears a ketone group on the carbon adjacent to the oxygen atom.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassLactones
Sub ClassGamma butyrolactones
Direct ParentGamma butyrolactones
Alternative Parents
Substituents
  • 2-furanone
  • Dicarboxylic acid or derivatives
  • Gamma butyrolactone
  • Dihydrofuran
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Oxolane
  • Carboxylic acid ester
  • Oxacycle
  • Ether
  • Oxirane
  • Dialkyl ether
  • Carboxylic acid derivative
  • Hydrocarbon derivative
  • Organic oxide
  • Carbonyl group
  • Organic oxygen compound
  • Organooxygen compound
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.59ChemAxon
pKa (Strongest Acidic)11.95ChemAxon
pKa (Strongest Basic)-4.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area65.13 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity68.46 m³·mol⁻¹ChemAxon
Polarizability26.94 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00043182
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound14081913
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Li Y, Zeng YF, Wang ZY, Fan Y, Yang X, Wang Z, Yu S, Pang Q, Cao AC: Deoxymikanolide adversely altered physiology and ultrastructure of Ralstonia solanacearum. Pestic Biochem Physiol. 2021 May;174:104803. doi: 10.1016/j.pestbp.2021.104803. Epub 2021 Feb 24. [PubMed:33838704 ]
  2. Moraes Neto RN, Setubal RFB, Higino TMM, Brelaz-de-Castro MCA, da Silva LCN, Alianca ASDS: Asteraceae Plants as Sources of Compounds Against Leishmaniasis and Chagas Disease. Front Pharmacol. 2019 May 8;10:477. doi: 10.3389/fphar.2019.00477. eCollection 2019. [PubMed:31156427 ]
  3. Puente V, Laurella LC, Spina RM, Lozano E, Martino VS, Sosa MA, Sulsen VP, Lombardo E: Primary targets of the sesquiterpene lactone deoxymikanolide on Trypanosoma cruzi. Phytomedicine. 2019 Mar 15;56:27-34. doi: 10.1016/j.phymed.2018.10.015. Epub 2018 Oct 11. [PubMed:30668348 ]
  4. Laurella LC, Cerny N, Bivona AE, Sanchez Alberti A, Giberti G, Malchiodi EL, Martino VS, Catalan CA, Alonso MR, Cazorla SI, Sulsen VP: Assessment of sesquiterpene lactones isolated from Mikania plants species for their potential efficacy against Trypanosoma cruzi and Leishmania sp. PLoS Negl Trop Dis. 2017 Sep 25;11(9):e0005929. doi: 10.1371/journal.pntd.0005929. eCollection 2017 Sep. [PubMed:28945741 ]
  5. Zhang XY, Shen J, Zhou Y, Wei ZP, Gao JM: Insecticidal Constituents from Buddlej aalbiflora Hemsl. Nat Prod Res. 2017 Jun;31(12):1446-1449. doi: 10.1080/14786419.2016.1247080. Epub 2016 Oct 21. [PubMed:27764958 ]
  6. Li Y, Li J, Li Y, Wang XX, Cao AC: Antimicrobial constituents of the leaves of Mikania micrantha H. B. K. PLoS One. 2013 Oct 2;8(10):e76725. doi: 10.1371/journal.pone.0076725. eCollection 2013. [PubMed:24098556 ]
  7. Shao H, Peng S, Wei X, Zhang D, Zhang C: Potential allelochemicals from an invasive weed Mikania micrantha H.B.K. J Chem Ecol. 2005 Jul;31(7):1657-68. doi: 10.1007/s10886-005-5805-0. [PubMed:16222800 ]
  8. LOTUS database [Link]