NP-MRD: Showing NP-Card for (2r)-3-hydroxy-2-{[(2e)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2z,4e,11e)-trideca-2,4,11-trienoate (NP0189359)

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Record Information

Version

2.0

Created at

2022-09-04 05:50:00 UTC

Updated at

2022-09-04 05:50:00 UTC

NP-MRD ID

NP0189359

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2r)-3-hydroxy-2-{[(2e)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2z,4e,11e)-trideca-2,4,11-trienoate

Description

(2R)-3-hydroxy-2-{[(2E)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2Z,4E,11E)-trideca-2,4,11-trienoate belongs to the class of organic compounds known as 1,2-diacylglycerols. These are diacylglycerols containing a glycerol acylated at positions 1 and 2. (2r)-3-hydroxy-2-{[(2e)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2z,4e,11e)-trideca-2,4,11-trienoate is found in Umbraculum mediterraneum. Based on a literature review very few articles have been published on (2R)-3-hydroxy-2-{[(2E)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2Z,4E,11E)-trideca-2,4,11-trienoate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309042207502D          

 26 25  0  0  1  0            999 V2000
   -3.2408    8.0289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5263    7.6164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5263    6.7914    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8118    6.3789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8118    5.5539    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0974    5.1414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0974    4.3164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3829    3.9039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3829    3.0789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3316    2.6664    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3316    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0461    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7605    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7605    2.6664    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4750    1.4289    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1895    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9039    1.4289    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9039    0.6039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6184    0.1914    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6184    1.8414    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3329    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3329    0.6039    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.0474    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7618    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4763    1.8414    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    8.1908    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 17 20  1  6  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 21 23  1  0  0  0  0
 23 24  2  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
M  END

     RDKit          3D

 56 55  0  0  0  0  0  0  0  0999 V2000
  -10.0422   -0.0830   -0.9669 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0128    0.8343   -1.5291 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7191    0.7102   -1.2596 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6961    1.6286   -1.8234 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9520    2.3418   -0.7309 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2361    1.3664    0.1879 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2430    0.5590   -0.6350 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5624   -0.3919    0.3318 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5594   -1.2450   -0.3539 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2759   -1.1713    0.0501 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3141   -2.0047   -0.6243 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9476   -2.0083   -0.3109 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5091   -1.1940    0.7257 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9177   -0.3820    1.4696 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9013   -1.2799    0.9815 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4991   -0.4879    2.0025 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9611   -0.7626    2.0687 C   0  0  1  0  0  0  0  0  0  0  0  0
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    7.0066    1.1099    1.7443 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3455    0.6832   -0.5183 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3026    1.5628   -0.6595 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1512    1.8692   -2.2039 S   0  0  0  0  0  0  0  0  0  0  0  0
   10.9364    1.6092   -1.8757 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.7488   -0.3076   -1.7833 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5216   -0.9617   -0.5612 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.6233    0.4673   -0.1915 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3613    1.6212   -2.1775 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3785   -0.0844   -0.6066 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2047    2.3784   -2.4598 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0002    1.0826   -2.5106 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6564    2.9337   -0.1429 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2304    3.0243   -1.2049 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9694    0.6993    0.6415 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6648    1.8950    0.9656 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4525    1.2139   -1.0543 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7465   -0.0683   -1.3886 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1416    0.1780    1.1593 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3399   -1.0739    0.7839 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8678   -1.9074   -1.1596 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1090   -0.4815    0.8505 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6935   -2.6614   -1.4418 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6091   -2.6692   -0.8711 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2731    0.5834    1.8841 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0420   -0.8242    2.9542 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3896   -0.0836    2.8606 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9064   -2.8474    1.6984 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5001   -2.4243    3.3720 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5867   -2.6288    3.7996 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0553    0.1101   -1.3940 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.6013    2.1382    0.1984 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.3136    2.5806   -1.4866 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.4663    1.2495   -2.7631 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.0886    0.8720   -1.0607 H   0  0  0  0  0  0  0  0  0  0  0  0
 26 25  1  0
 25 24  1  0
 24 23  2  0
 23 21  1  0
 21 22  2  0
 21 20  1  0
 20 17  1  0
 17 18  1  0
 18 19  1  0
 17 16  1  0
 16 15  1  0
 15 13  1  0
 13 14  2  0
 13 12  1  0
 12 11  2  0
 11 10  1  0
 10  9  2  0
  9  8  1  0
  8  7  1  0
  7  6  1  0
  6  5  1  0
  5  4  1  0
  4  3  1  0
  3  2  2  0
  2  1  1  0
 26 54  1  0
 26 55  1  0
 26 56  1  0
 24 53  1  0
 23 52  1  0
 17 48  1  1
 18 49  1  0
 18 50  1  0
 19 51  1  0
 16 46  1  0
 16 47  1  0
 12 45  1  0
 11 44  1  0
 10 43  1  0
  9 42  1  0
  8 40  1  0
  8 41  1  0
  7 38  1  0
  7 39  1  0
  6 36  1  0
  6 37  1  0
  5 34  1  0
  5 35  1  0
  4 32  1  0
  4 33  1  0
  3 31  1  0
  2 30  1  0
  1 27  1  0
  1 28  1  0
  1 29  1  0
M  END


  Mrv1652309042207502D          

 26 25  0  0  1  0            999 V2000
   -3.2408    8.0289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5263    7.6164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5263    6.7914    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8118    6.3789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8118    5.5539    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0974    5.1414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0974    4.3164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3829    3.9039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3829    3.0789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3316    2.6664    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3316    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0461    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7605    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7605    2.6664    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4750    1.4289    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1895    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9039    1.4289    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9039    0.6039    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6184    0.1914    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6184    1.8414    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3329    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3329    0.6039    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.0474    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7618    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4763    1.8414    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    8.1908    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 17 20  1  6  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 21 23  1  0  0  0  0
 23 24  2  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0189359

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CS\C=C\C(=O)O[C@H](CO)COC(=O)\C=C/C=C/CCCCC\C=C\C

> <INCHI_IDENTIFIER>
InChI=1S/C20H30O5S/c1-3-4-5-6-7-8-9-10-11-12-13-19(22)24-17-18(16-21)25-20(23)14-15-26-2/h3-4,10-15,18,21H,5-9,16-17H2,1-2H3/b4-3+,11-10+,13-12-,15-14+/t18-/m1/s1

> <INCHI_KEY>
FQNSBAJAEUVMAS-SNLVVRNGSA-N

> <FORMULA>
C20H30O5S

> <MOLECULAR_WEIGHT>
382.52

> <EXACT_MASS>
382.18139524

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
56

> <JCHEM_AVERAGE_POLARIZABILITY>
44.36486456887108

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2R)-3-hydroxy-2-{[(2E)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2Z,4E,11E)-trideca-2,4,11-trienoate

> <JCHEM_LOGP>
4.919805274000001

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.577161684359211

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9837494792612818

> <JCHEM_POLAR_SURFACE_AREA>
72.83000000000001

> <JCHEM_REFRACTIVITY>
110.27929999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
16

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(2R)-3-hydroxy-2-{[(2E)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2Z,4E,11E)-trideca-2,4,11-trienoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 04-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   04-SEP-22         0                                  
HETATM    1  C   UNK     0      -6.049  14.987   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -4.716  14.217   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -4.716  12.677   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -3.382  11.907   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -3.382  10.367   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -2.048   9.597   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -2.048   8.057   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -0.715   7.287   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -0.715   5.747   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.619   4.977   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.619   3.437   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.953   2.667   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       3.286   3.437   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       3.286   4.977   0.000  0.00  0.00           O+0
HETATM   15  O   UNK     0       4.620   2.667   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       5.954   3.437   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       7.287   2.667   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       7.287   1.127   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       8.621   0.357   0.000  0.00  0.00           O+0
HETATM   20  O   UNK     0       8.621   3.437   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       9.955   2.667   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0       9.955   1.127   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0      11.288   3.437   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      12.622   2.667   0.000  0.00  0.00           C+0
HETATM   25  S   UNK     0      13.956   3.437   0.000  0.00  0.00           S+0
HETATM   26  C   UNK     0      15.289   2.667   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18   20                                                  
CONECT   18   17   19                                                       
CONECT   19   18                                                            
CONECT   20   17   21                                                       
CONECT   21   20   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25                                                            
MASTER        0    0    0    0    0    0    0    0   26    0   50    0
END

View in JSmol

Synonyms

Value	Source
(2R)-3-Hydroxy-2-{[(2E)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2Z,4E,11E)-trideca-2,4,11-trienoic acid	Generator
(2R)-3-Hydroxy-2-{[(2E)-3-(methylsulphanyl)prop-2-enoyl]oxy}propyl (2Z,4E,11E)-trideca-2,4,11-trienoate	Generator
(2R)-3-Hydroxy-2-{[(2E)-3-(methylsulphanyl)prop-2-enoyl]oxy}propyl (2Z,4E,11E)-trideca-2,4,11-trienoic acid	Generator

Chemical Formula

C₂₀H₃₀O₅S

Average Mass

382.5200 Da

Monoisotopic Mass

382.18140 Da

IUPAC Name

(2R)-3-hydroxy-2-{[(2E)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2Z,4E,11E)-trideca-2,4,11-trienoate

Traditional Name

(2R)-3-hydroxy-2-{[(2E)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2Z,4E,11E)-trideca-2,4,11-trienoate

CAS Registry Number

Not Available

SMILES

CS\C=C\C(=O)O[C@H](CO)COC(=O)\C=C/C=C/CCCCC\C=C\C

InChI Identifier

InChI=1S/C20H30O5S/c1-3-4-5-6-7-8-9-10-11-12-13-19(22)24-17-18(16-21)25-20(23)14-15-26-2/h3-4,10-15,18,21H,5-9,16-17H2,1-2H3/b4-3+,11-10+,13-12-,15-14+/t18-/m1/s1

InChI Key

FQNSBAJAEUVMAS-SNLVVRNGSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Umbraculum mediterraneum	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 1,2-diacylglycerols. These are diacylglycerols containing a glycerol acylated at positions 1 and 2.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Glycerolipids

Sub Class

Diradylglycerols

Direct Parent

1,2-diacylglycerols

Alternative Parents

Substituents

1,2-acyl-sn-glycerol
Fatty acid ester
Dicarboxylic acid or derivatives
Vinylogous thioester
Fatty acyl
Acrylic acid or derivatives
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Carboxylic acid ester
Thioenolether
Carboxylic acid derivative
Sulfenyl compound
Primary alcohol
Organosulfur compound
Organooxygen compound
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Carbonyl group
Alcohol
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.92	ChemAxon
pKa (Strongest Acidic)	14.58	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	72.83 Å²	ChemAxon
Rotatable Bond Count	16	ChemAxon
Refractivity	110.28 m³·mol⁻¹	ChemAxon
Polarizability	44.36 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162965995

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (2r)-3-hydroxy-2-{[(2e)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2z,4e,11e)-trideca-2,4,11-trienoate (NP0189359)

MOL for NP0189359 ((2r)-3-hydroxy-2-{[(2e)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2z,4e,11e)-trideca-2,4,11-trienoate)

3D MOL for NP0189359 ((2r)-3-hydroxy-2-{[(2e)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2z,4e,11e)-trideca-2,4,11-trienoate)

3D SDF for NP0189359 ((2r)-3-hydroxy-2-{[(2e)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2z,4e,11e)-trideca-2,4,11-trienoate)

3D-SDF for NP0189359 ((2r)-3-hydroxy-2-{[(2e)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2z,4e,11e)-trideca-2,4,11-trienoate)

PDB for NP0189359 ((2r)-3-hydroxy-2-{[(2e)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2z,4e,11e)-trideca-2,4,11-trienoate)

3D PDB for NP0189359 ((2r)-3-hydroxy-2-{[(2e)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2z,4e,11e)-trideca-2,4,11-trienoate)

SMILES for NP0189359 ((2r)-3-hydroxy-2-{[(2e)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2z,4e,11e)-trideca-2,4,11-trienoate)

INCHI for NP0189359 ((2r)-3-hydroxy-2-{[(2e)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2z,4e,11e)-trideca-2,4,11-trienoate)

Structure for NP0189359 ((2r)-3-hydroxy-2-{[(2e)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2z,4e,11e)-trideca-2,4,11-trienoate)

3D Structure for NP0189359 ((2r)-3-hydroxy-2-{[(2e)-3-(methylsulfanyl)prop-2-enoyl]oxy}propyl (2z,4e,11e)-trideca-2,4,11-trienoate)