NP-MRD: Showing NP-Card for (2e)-2-{2-[(2r,5r)-2-[(2e)-3-carboxy-3-methylprop-2-en-1-yl]-5-isopropyl-2-methylcyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid (NP0187231)

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Record Information

Version

1.0

Created at

2022-09-04 03:19:40 UTC

Updated at

2022-09-04 03:19:40 UTC

NP-MRD ID

NP0187231

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2e)-2-{2-[(2r,5r)-2-[(2e)-3-carboxy-3-methylprop-2-en-1-yl]-5-isopropyl-2-methylcyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid

Description

Psathyrelloic acid, also known as psathyrelloate, belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units. (2e)-2-{2-[(2r,5r)-2-[(2e)-3-carboxy-3-methylprop-2-en-1-yl]-5-isopropyl-2-methylcyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid is found in Psathyrella candolleana. It was first documented in 2022 (PMID: 36057848). Based on a literature review a significant number of articles have been published on Psathyrelloic acid (PMID: 36057403) (PMID: 36057425) (PMID: 36057399) (PMID: 36057394) (PMID: 36057827) (PMID: 36057824).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309042205192D          

 25 25  0  0  1  0            999 V2000
    2.2239    2.9536    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4169    3.1251    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8649    2.5120    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1198    1.7274    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5678    1.1143    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0157    1.7274    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2352    0.6294    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9803   -0.1553    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1553   -0.1553    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3297   -0.8227    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1501   -0.7365    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0059   -1.5764    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0997    0.6294    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8843    0.8843    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4974    0.3323    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2820    0.5872    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8951    0.0352    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7236   -0.7718    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3367   -1.3238    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4535    1.3942    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2382    1.6491    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8405    1.9462    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1619    3.9097    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3550    4.0812    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7140    4.5228    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  5  4  1  1  0  0  0
  5  6  1  6  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  6  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
  9 13  1  0  0  0  0
  5 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  4  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 16 20  1  0  0  0  0
 20 21  2  0  0  0  0
 20 22  1  0  0  0  0
  2 23  1  0  0  0  0
 23 24  2  0  0  0  0
 23 25  1  0  0  0  0
M  END

     RDKit          3D

 55 55  0  0  0  0  0  0  0  0999 V2000
    3.4300   -2.4037   -2.3108 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1512   -1.5486   -1.3539 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5440   -0.5279   -0.7738 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1219   -0.1871   -1.0471 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2621   -0.2508    0.1645 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1464   -1.6374    0.7306 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7467    0.7260    1.2187 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3326    2.0357    0.6187 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1233    1.7446   -0.2601 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.9117    2.7654   -0.0303 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2506    4.1426   -0.3999 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3864    2.9580    1.3663 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1409    0.3240   -0.0992 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1648   -0.4864   -0.1186 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5984   -0.2131   -0.3318 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4613   -0.9098    0.6417 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3695   -1.7592    0.2423 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6221   -2.0999   -1.1386 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9777   -1.7422   -1.3935 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2834   -0.6463    2.0897 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4379    0.1393    2.5102 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0937   -1.3057    3.0007 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.5409   -1.8217   -1.0389 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1556   -2.7838   -1.5695 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.2168   -1.0155   -0.1380 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9263   -1.8111   -3.1163 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1498   -3.0655   -2.8333 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6889   -3.0712   -1.7985 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1266    0.0634   -0.0852 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6868   -0.8193   -1.8360 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1340    0.8491   -1.4416 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8718   -2.3395   -0.0551 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3671   -1.6364    1.5169 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1119   -1.9165    1.2299 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8253    0.5912    1.3492 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1743    0.4995    2.1459 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0931    2.4975   -0.0091 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1002    2.7429    1.4352 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4286    1.8731   -1.3605 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7165    2.6836   -0.7820 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3309    4.5080    0.4687 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0535    4.8806   -0.5994 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3410    4.0285   -1.3208 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7920    2.2479    2.0077 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4498    2.6627    1.4556 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2922    3.9968    1.7549 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9535   -1.5746    0.0439 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7805    0.8819   -0.0789 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8418   -0.2953   -1.3737 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0012   -2.2635    1.0146 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6501   -3.2298   -1.3068 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0629   -1.6366   -1.9289 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5096   -2.3147   -0.7673 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1052   -2.3112    3.1264 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7792   -0.2180   -0.4070 H   0  0  0  0  0  0  0  0  0  0  0  0
 11 10  1  0
 10 12  1  0
 10  9  1  0
  9  8  1  0
  8  7  1  0
  7  5  1  0
  5  6  1  1
  5  4  1  0
  4  3  1  0
  3  2  2  0
  2  1  1  0
  2 23  1  0
 23 25  1  0
 23 24  2  0
  5 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  1  0
 16 20  1  0
 20 22  1  0
 20 21  2  0
 13  9  1  0
 11 41  1  0
 11 42  1  0
 11 43  1  0
 10 40  1  0
 12 44  1  0
 12 45  1  0
 12 46  1  0
  9 39  1  6
  8 37  1  0
  8 38  1  0
  7 35  1  0
  7 36  1  0
  6 32  1  0
  6 33  1  0
  6 34  1  0
  4 30  1  0
  4 31  1  0
  3 29  1  0
  1 26  1  0
  1 27  1  0
  1 28  1  0
 25 55  1  0
 14 47  1  0
 15 48  1  0
 15 49  1  0
 17 50  1  0
 18 51  1  0
 18 52  1  0
 19 53  1  0
 22 54  1  0
M  END


  Mrv1652309042205192D          

 25 25  0  0  1  0            999 V2000
    2.2239    2.9536    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4169    3.1251    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8649    2.5120    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1198    1.7274    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5678    1.1143    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0157    1.7274    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2352    0.6294    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9803   -0.1553    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1553   -0.1553    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3297   -0.8227    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1501   -0.7365    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0059   -1.5764    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0997    0.6294    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8843    0.8843    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4974    0.3323    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2820    0.5872    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8951    0.0352    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7236   -0.7718    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3367   -1.3238    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4535    1.3942    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2382    1.6491    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8405    1.9462    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1619    3.9097    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3550    4.0812    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7140    4.5228    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  5  4  1  1  0  0  0
  5  6  1  6  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  6  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
  9 13  1  0  0  0  0
  5 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  4  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 16 20  1  0  0  0  0
 20 21  2  0  0  0  0
 20 22  1  0  0  0  0
  2 23  1  0  0  0  0
 23 24  2  0  0  0  0
 23 25  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0187231

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(C)[C@H]1CC[C@](C)(C\C=C(/C)C(O)=O)C1=CC\C(=C/CO)C(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C20H30O5/c1-13(2)16-8-11-20(4,10-7-14(3)18(22)23)17(16)6-5-15(9-12-21)19(24)25/h6-7,9,13,16,21H,5,8,10-12H2,1-4H3,(H,22,23)(H,24,25)/b14-7+,15-9+,17-6?/t16-,20+/m1/s1

> <INCHI_KEY>
YNSXHFRWBMHNHW-XMZPZSOLSA-N

> <FORMULA>
C20H30O5

> <MOLECULAR_WEIGHT>
350.455

> <EXACT_MASS>
350.209324066

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
55

> <JCHEM_AVERAGE_POLARIZABILITY>
38.48941943527675

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2E)-2-{2-[(2R,5R)-2-[(2E)-3-carboxy-3-methylprop-2-en-1-yl]-2-methyl-5-(propan-2-yl)cyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid

> <JCHEM_LOGP>
3.687429940333333

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-2

> <JCHEM_PKA>
5.223624764428366

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.6011599744390566

> <JCHEM_PKA_STRONGEST_BASIC>
-2.553381803954206

> <JCHEM_POLAR_SURFACE_AREA>
94.83

> <JCHEM_REFRACTIVITY>
99.33879999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
8

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(2E)-2-{2-[(2R,5R)-2-[(2E)-3-carboxy-3-methylprop-2-en-1-yl]-5-isopropyl-2-methylcyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 04-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   04-SEP-22         0                                  
HETATM    1  C   UNK     0       4.151   5.513   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       2.645   5.834   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       1.614   4.689   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.090   3.224   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.060   2.080   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       0.029   3.224   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.306   1.175   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.830  -0.290   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.290  -0.290   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.615  -1.536   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -2.147  -1.375   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       0.011  -2.943   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      -0.186   1.175   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -1.651   1.651   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -2.795   0.620   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -4.260   1.096   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -5.404   0.066   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -5.084  -1.441   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      -6.228  -2.471   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0      -4.580   2.602   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0      -6.045   3.078   0.000  0.00  0.00           O+0
HETATM   22  O   UNK     0      -3.436   3.633   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0       2.169   7.298   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0       0.663   7.618   0.000  0.00  0.00           O+0
HETATM   25  O   UNK     0       3.199   8.443   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   23                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6    7   13                                             
CONECT    6    5                                                            
CONECT    7    5    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10   13                                                  
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10                                                            
CONECT   13    9    5   14                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17   20                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18                                                            
CONECT   20   16   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20                                                            
CONECT   23    2   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23                                                            
MASTER        0    0    0    0    0    0    0    0   25    0   50    0
END

View in JSmol

Synonyms

Value	Source
Psathyrelloate	Generator

Chemical Formula

C₂₀H₃₀O₅

Average Mass

350.4550 Da

Monoisotopic Mass

350.20932 Da

IUPAC Name

(2E)-2-{2-[(2R,5R)-2-[(2E)-3-carboxy-3-methylprop-2-en-1-yl]-2-methyl-5-(propan-2-yl)cyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid

Traditional Name

(2E)-2-{2-[(2R,5R)-2-[(2E)-3-carboxy-3-methylprop-2-en-1-yl]-5-isopropyl-2-methylcyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid

CAS Registry Number

Not Available

SMILES

CC(C)[C@H]1CC[C@](C)(C\C=C(/C)C(O)=O)C1=CC\C(=C/CO)C(O)=O

InChI Identifier

InChI=1S/C20H30O5/c1-13(2)16-8-11-20(4,10-7-14(3)18(22)23)17(16)6-5-15(9-12-21)19(24)25/h6-7,9,13,16,21H,5,8,10-12H2,1-4H3,(H,22,23)(H,24,25)/b14-7+,15-9+,17-6?/t16-,20+/m1/s1

InChI Key

YNSXHFRWBMHNHW-XMZPZSOLSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Candolleomyces candolleanus	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Sesquiterpenoids

Direct Parent

Sesquiterpenoids

Alternative Parents

Substituents

Sesquiterpenoid
Medium-chain hydroxy acid
Medium-chain fatty acid
Methyl-branched fatty acid
Hydroxy fatty acid
Branched fatty acid
Fatty acyl
Fatty acid
Unsaturated fatty acid
Dicarboxylic acid or derivatives
Carboxylic acid
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Primary alcohol
Organooxygen compound
Carbonyl group
Alcohol
Aliphatic homomonocyclic compound

Molecular Framework

Aliphatic homomonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.69	ChemAxon
pKa (Strongest Acidic)	4.6	ChemAxon
pKa (Strongest Basic)	-2.6	ChemAxon
Physiological Charge	-2	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	94.83 Å²	ChemAxon
Rotatable Bond Count	8	ChemAxon
Refractivity	99.34 m³·mol⁻¹	ChemAxon
Polarizability	38.49 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

146683515

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Marszalek-Grabska M, Zakrocka I, Budzynska B, Marciniak S, Kaszubska K, Lemieszek MK, Winiarczyk S, Kotlinska JH, Rzeski W, Turski WA: Binge-like mephedrone treatment induces memory impairment concomitant with brain kynurenic acid reduction in mice. Toxicol Appl Pharmacol. 2022 Aug 31;454:116216. doi: 10.1016/j.taap.2022.116216. [PubMed:36057403 ]
Wang G, Wang F, Pei H, Li M, Bai F, Lei C, Dang R: Genome-wide analysis reveals selection signatures for body size and drought adaptation in Liangzhou donkey. Genomics. 2022 Aug 31;114(6):110476. doi: 10.1016/j.ygeno.2022.110476. [PubMed:36057425 ]
Wang XY, Lu LJ, Li YM, Xu CF: MicroRNA-376b-3p ameliorates nonalcoholic fatty liver disease by targeting FGFR1 and regulating lipid oxidation in hepatocytes. Life Sci. 2022 Nov 1;308:120925. doi: 10.1016/j.lfs.2022.120925. Epub 2022 Aug 31. [PubMed:36057399 ]
Chowdhury A, Lewin MR, Carter RW, Casewell NR, Fry BG: Keel venom: Rhabdophis subminiatus (Red-Necked Keelback) venom pathophysiologically affects diverse blood clotting pathways. Toxicon. 2022 Oct 30;218:19-24. doi: 10.1016/j.toxicon.2022.08.017. Epub 2022 Aug 31. [PubMed:36057394 ]
Gong X, Shi L, Wu Y, Luo Y, Kwok T: B Vitamin Supplementation Slows Cognitive Decline in Mild Cognitive Impairment Patients with Frontal Lobe Atrophy. J Alzheimers Dis. 2022 Sep 1. pii: JAD220685. doi: 10.3233/JAD-220685. [PubMed:36057827 ]
Cardoso CP, da Silva Nunes G, da Silva JLF, de Mello Prado R, de Farias Guedes VH, de Bortoli SA, de Souza Junior JP: Silicon and boron on cauliflower induce attractiveness and mortality in Plutella xylostella. Pest Manag Sci. 2022 Dec;78(12):5432-5436. doi: 10.1002/ps.7165. Epub 2022 Sep 20. [PubMed:36057848 ]
Ohno K, Abdelhamid M, Zhou C, Jung CG, Michikawa M: Bifidobacterium breve MCC1274 Supplementation Increased the Plasma Levels of Metabolites with Potential Anti-Oxidative Activity in APP Knock-In Mice. J Alzheimers Dis. 2022;89(4):1413-1425. doi: 10.3233/JAD-220479. [PubMed:36057824 ]
Ogawa A, Kojima F, Miyake Y, Yoshimura M, Ishijima N, Iyoda S, Sekine Y, Yamanaka Y, Yamamoto K: Regulation of constant cell elongation and Sfm pili synthesis in Escherichia coli via two active forms of FimZ orphan response regulator. Genes Cells. 2022 Nov;27(11):657-674. doi: 10.1111/gtc.12982. Epub 2022 Sep 18. [PubMed:36057789 ]
Ben-Azu B, Adebayo OG, Jarikre TA, Oyovwi MO, Edje KE, Omogbiya IA, Eduviere AT, Moke EG, Chijioke BS, Odili OS, Omondiabge OP, Oyovbaire A, Esuku DT, Ozah EO, Japhet K: Taurine, an essential beta-amino acid insulates against ketamine-induced experimental psychosis by enhancement of cholinergic neurotransmission, inhibition of oxidative/nitrergic imbalances, and suppression of COX-2/iNOS immunoreactions in mice. Metab Brain Dis. 2022 Sep 3. pii: 10.1007/s11011-022-01075-5. doi: 10.1007/s11011-022-01075-5. [PubMed:36057735 ]
Lin H, Xu Y, Zheng Y, Wu D, Ye Z, Xiao J: The association of urinary prostaglandins with uric acid in hyperuricemia patients. BMC Nephrol. 2022 Sep 3;23(1):302. doi: 10.1186/s12882-022-02928-y. [PubMed:36057582 ]
Teng KT, Aerts M, Jaspers S, Ugarte-Ruiz M, Moreno MA, Saez JL, Collado S, de Frutos C, Dominguez L, Alvarez J: Patterns of antimicrobial resistance in Salmonella isolates from fattening pigs in Spain. BMC Vet Res. 2022 Sep 3;18(1):333. doi: 10.1186/s12917-022-03377-3. [PubMed:36057710 ]
Feng L, Yang X, Lu X, Kan Y, Wang C, Sun D, Zhang H, Wang W, Yang J: (18)F-FDG PET/CT-based radiomics nomogram could predict bone marrow involvement in pediatric neuroblastoma. Insights Imaging. 2022 Sep 4;13(1):144. doi: 10.1186/s13244-022-01283-8. [PubMed:36057694 ]
Lee GS, Park B, Hong SH: Stereoretentive cross-coupling of chiral amino acid chlorides and hydrocarbons through mechanistically controlled Ni/Ir photoredox catalysis. Nat Commun. 2022 Sep 3;13(1):5200. doi: 10.1038/s41467-022-32851-7. [PubMed:36057676 ]
Zhou J, Pang J, Tripathi M, Ho JP, Widjaja AA, Shekeran SG, Cook SA, Suzuki A, Diehl AM, Petretto E, Singh BK, Yen PM: Spermidine-mediated hypusination of translation factor EIF5A improves mitochondrial fatty acid oxidation and prevents non-alcoholic steatohepatitis progression. Nat Commun. 2022 Sep 3;13(1):5202. doi: 10.1038/s41467-022-32788-x. [PubMed:36057633 ]
Lu XY, Zhang JY, Zhang T, Zhang XQ, Lu J, Miao XF, Chen WB, Jiang JF, Ding D, Du S: Using pre-operative radiomics to predict microvascular invasion of hepatocellular carcinoma based on Gd-EOB-DTPA enhanced MRI. BMC Med Imaging. 2022 Sep 3;22(1):157. doi: 10.1186/s12880-022-00855-w. [PubMed:36057576 ]
LOTUS database [Link]

Showing NP-Card for (2e)-2-{2-[(2r,5r)-2-[(2e)-3-carboxy-3-methylprop-2-en-1-yl]-5-isopropyl-2-methylcyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid (NP0187231)

MOL for NP0187231 ((2e)-2-{2-[(2r,5r)-2-[(2e)-3-carboxy-3-methylprop-2-en-1-yl]-5-isopropyl-2-methylcyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid)

3D MOL for NP0187231 ((2e)-2-{2-[(2r,5r)-2-[(2e)-3-carboxy-3-methylprop-2-en-1-yl]-5-isopropyl-2-methylcyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid)

3D SDF for NP0187231 ((2e)-2-{2-[(2r,5r)-2-[(2e)-3-carboxy-3-methylprop-2-en-1-yl]-5-isopropyl-2-methylcyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid)

3D-SDF for NP0187231 ((2e)-2-{2-[(2r,5r)-2-[(2e)-3-carboxy-3-methylprop-2-en-1-yl]-5-isopropyl-2-methylcyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid)

PDB for NP0187231 ((2e)-2-{2-[(2r,5r)-2-[(2e)-3-carboxy-3-methylprop-2-en-1-yl]-5-isopropyl-2-methylcyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid)

3D PDB for NP0187231 ((2e)-2-{2-[(2r,5r)-2-[(2e)-3-carboxy-3-methylprop-2-en-1-yl]-5-isopropyl-2-methylcyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid)

SMILES for NP0187231 ((2e)-2-{2-[(2r,5r)-2-[(2e)-3-carboxy-3-methylprop-2-en-1-yl]-5-isopropyl-2-methylcyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid)

INCHI for NP0187231 ((2e)-2-{2-[(2r,5r)-2-[(2e)-3-carboxy-3-methylprop-2-en-1-yl]-5-isopropyl-2-methylcyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid)

Structure for NP0187231 ((2e)-2-{2-[(2r,5r)-2-[(2e)-3-carboxy-3-methylprop-2-en-1-yl]-5-isopropyl-2-methylcyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid)

3D Structure for NP0187231 ((2e)-2-{2-[(2r,5r)-2-[(2e)-3-carboxy-3-methylprop-2-en-1-yl]-5-isopropyl-2-methylcyclopentylidene]ethyl}-4-hydroxybut-2-enoic acid)