NP-MRD: Showing NP-Card for methyl 2-[(3s,5r)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate (NP0184513)

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Record Information

Version

2.0

Created at

2022-09-03 23:39:57 UTC

Updated at

2022-09-03 23:39:57 UTC

NP-MRD ID

NP0184513

Secondary Accession Numbers

None

Natural Product Identification

Common Name

methyl 2-[(3s,5r)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate

Description

CHEMBL1270950 belongs to the class of organic compounds known as fatty acid esters. These are carboxylic ester derivatives of a fatty acid. methyl 2-[(3s,5r)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate is found in Plakortis halichondrioides. Based on a literature review very few articles have been published on CHEMBL1270950.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309042201392D          

 28 28  0  0  1  0            999 V2000
   -6.9915   -6.9659    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3378   -7.4692    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5751   -7.1547    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9214   -7.6579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1587   -7.3434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5049   -7.8466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7423   -7.5321    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0885   -8.0353    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3258   -7.7208    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2169   -6.9030    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4542   -6.5885    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1995   -7.0918    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9622   -6.7772    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6160   -7.2805    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3787   -6.9659    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0324   -7.4692    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7951   -7.1547    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0282   -7.9461    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4026   -6.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9714   -5.8315    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3176   -5.3282    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4035   -5.1287    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0110   -4.4031    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1863   -4.3802    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.4432   -3.7003    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2678   -3.7232    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7155   -6.1878    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6065   -7.0056    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 17 16  1  6  0  0  0
 17 18  1  1  0  0  0
 17 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  6  0  0  0
 20 22  1  1  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 23 25  1  0  0  0  0
 25 26  1  0  0  0  0
 20 27  1  0  0  0  0
 27 28  1  0  0  0  0
 17 28  1  0  0  0  0
M  END

     RDKit          3D

 74 74  0  0  0  0  0  0  0  0999 V2000
    8.6148   -3.1646   -0.0823 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3118   -2.5971    1.2995 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2516   -1.4950    1.2013 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7818   -0.4026    0.3116 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8092    0.7247    0.1655 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4916    0.3022   -0.4424 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5974    1.5434   -0.5269 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2543    1.1823   -1.1401 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3891    2.4248   -1.2100 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1267    3.0211    0.1445 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4085    2.0845    1.0885 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0339    1.6960    0.5271 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5772    0.7666    1.5420 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9592    0.2885    1.1738 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8809    1.4267    1.0395 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2976    1.1758    0.7316 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6543    0.4707   -0.5119 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.1825    1.1530   -1.7727 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2026    0.5452   -0.6055 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5424   -0.6223    0.2870 C   0  0  1  0  0  0  0  0  0  0  0  0
   -7.0778   -0.1295    1.6242 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5098   -1.5980   -0.3062 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0633   -2.2444   -1.5454 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0730   -1.6284   -2.6200 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6282   -3.5573   -1.5123 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1992   -4.1842   -2.7166 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3120   -1.2764    0.4681 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5034   -0.8876   -0.4874 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.1062   -4.1572    0.0088 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.6930   -3.3103   -0.6622 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.3215   -2.5171   -0.6184 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.9158   -3.4042    1.9468 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.2205   -2.1012    1.7203 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3259   -1.9319    0.7968 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1350   -1.0843    2.2270 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0604   -0.8602   -0.6695 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.6916    0.0103    0.8271 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2750    1.4743   -0.5337 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6794    1.2096    1.1411 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6252   -0.1421   -1.4455 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0477   -0.4656    0.2201 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0799    2.2671   -1.2096 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4893    2.0030    0.4619 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3712    0.8272   -2.1810 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7425    0.4073   -0.5585 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4423    2.2631   -1.7279 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9875    3.1948   -1.7673 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4697    3.9170    0.0272 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0339    3.3857    0.6645 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2795    2.6342    2.0388 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9460    1.1493    1.2843 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1572    1.2168   -0.4589 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5645    2.6184    0.3615 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0820   -0.1546    1.5399 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5377    1.1786    2.5676 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8483   -0.3431    0.2714 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2611   -0.4124    1.9921 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4832    2.0835    0.2034 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7532    2.0738    1.9496 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9153    2.1186    0.7977 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7134    0.5538    1.5835 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8285    2.0172   -2.0717 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2512    0.4379   -2.6377 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1612    1.5626   -1.6460 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5439    1.5255   -0.2127 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5006    0.3617   -1.6388 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6089   -0.6299    2.4828 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0586    0.9912    1.6938 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1569   -0.3883    1.6613 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.5215   -1.1296   -0.4189 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6424   -2.4087    0.4716 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5658   -3.6160   -3.6048 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0980   -4.2163   -2.7543 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5712   -5.2278   -2.7862 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 17 16  1  1
 17 18  1  0
 17 19  1  0
 19 20  1  0
 20 21  1  1
 20 22  1  0
 22 23  1  0
 23 24  2  0
 23 25  1  0
 25 26  1  0
 20 27  1  0
 27 28  1  0
 28 17  1  0
  1 29  1  0
  1 30  1  0
  1 31  1  0
  2 32  1  0
  2 33  1  0
  3 34  1  0
  3 35  1  0
  4 36  1  0
  4 37  1  0
  5 38  1  0
  5 39  1  0
  6 40  1  0
  6 41  1  0
  7 42  1  0
  7 43  1  0
  8 44  1  0
  8 45  1  0
  9 46  1  0
  9 47  1  0
 10 48  1  0
 10 49  1  0
 11 50  1  0
 11 51  1  0
 12 52  1  0
 12 53  1  0
 13 54  1  0
 13 55  1  0
 14 56  1  0
 14 57  1  0
 15 58  1  0
 15 59  1  0
 16 60  1  0
 16 61  1  0
 18 62  1  0
 18 63  1  0
 18 64  1  0
 19 65  1  0
 19 66  1  0
 21 67  1  0
 21 68  1  0
 21 69  1  0
 22 70  1  0
 22 71  1  0
 26 72  1  0
 26 73  1  0
 26 74  1  0
M  END


  Mrv1652309042201392D          

 28 28  0  0  1  0            999 V2000
   -6.9915   -6.9659    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3378   -7.4692    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5751   -7.1547    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9214   -7.6579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1587   -7.3434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5049   -7.8466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7423   -7.5321    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0885   -8.0353    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3258   -7.7208    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2169   -6.9030    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4542   -6.5885    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1995   -7.0918    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9622   -6.7772    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6160   -7.2805    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3787   -6.9659    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0324   -7.4692    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7951   -7.1547    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0282   -7.9461    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4026   -6.4290    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9714   -5.8315    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3176   -5.3282    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4035   -5.1287    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0110   -4.4031    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1863   -4.3802    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.4432   -3.7003    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2678   -3.7232    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7155   -6.1878    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6065   -7.0056    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 17 16  1  6  0  0  0
 17 18  1  1  0  0  0
 17 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  6  0  0  0
 20 22  1  1  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 23 25  1  0  0  0  0
 25 26  1  0  0  0  0
 20 27  1  0  0  0  0
 27 28  1  0  0  0  0
 17 28  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0184513

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCCCCCCCCCCCCCCC[C@]1(C)C[C@@](C)(CC(=O)OC)OO1

> <INCHI_IDENTIFIER>
InChI=1S/C24H46O4/c1-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-23(2)21-24(3,28-27-23)20-22(25)26-4/h5-21H2,1-4H3/t23-,24-/m1/s1

> <INCHI_KEY>
DVDILLRCOVOIFH-DNQXCXABSA-N

> <FORMULA>
C24H46O4

> <MOLECULAR_WEIGHT>
398.628

> <EXACT_MASS>
398.339609961

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
74

> <JCHEM_AVERAGE_POLARIZABILITY>
51.37392340209682

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
methyl 2-[(3S,5R)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate

> <JCHEM_LOGP>
7.842023064

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-4.847022800205393

> <JCHEM_POLAR_SURFACE_AREA>
44.760000000000005

> <JCHEM_REFRACTIVITY>
114.8467

> <JCHEM_ROTATABLE_BOND_COUNT>
18

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
methyl [(3S,5R)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 04-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   04-SEP-22         0                                  
HETATM    1  C   UNK     0     -13.051 -13.003   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0     -11.831 -13.942   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0     -10.407 -13.355   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -9.187 -14.295   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -7.763 -13.708   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -6.543 -14.647   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -5.119 -14.060   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -3.899 -14.999   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -2.475 -14.412   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -2.272 -12.886   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -0.848 -12.299   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       0.372 -13.238   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       1.796 -12.651   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       3.016 -13.590   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       4.440 -13.003   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       5.660 -13.942   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       7.084 -13.355   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       7.519 -14.833   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       6.351 -12.001   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       7.413 -10.885   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       6.193  -9.946   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       8.220  -9.574   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       7.487  -8.219   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0       5.948  -8.176   0.000  0.00  0.00           O+0
HETATM   25  O   UNK     0       8.294  -6.907   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       9.833  -6.950   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       8.802 -11.551   0.000  0.00  0.00           O+0
HETATM   28  O   UNK     0       8.599 -13.077   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18   19   28                                             
CONECT   18   17                                                            
CONECT   19   17   20                                                       
CONECT   20   19   21   22   27                                             
CONECT   21   20                                                            
CONECT   22   20   23                                                       
CONECT   23   22   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23   26                                                       
CONECT   26   25                                                            
CONECT   27   20   28                                                       
CONECT   28   27   17                                                       
MASTER        0    0    0    0    0    0    0    0   28    0   56    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₄H₄₆O₄

Average Mass

398.6280 Da

Monoisotopic Mass

398.33961 Da

IUPAC Name

methyl 2-[(3S,5R)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate

Traditional Name

methyl [(3S,5R)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate

CAS Registry Number

Not Available

SMILES

CCCCCCCCCCCCCCCC[C@]1(C)C[C@@](C)(CC(=O)OC)OO1

InChI Identifier

InChI=1S/C24H46O4/c1-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-23(2)21-24(3,28-27-23)20-22(25)26-4/h5-21H2,1-4H3/t23-,24-/m1/s1

InChI Key

DVDILLRCOVOIFH-DNQXCXABSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Plakortis halichondrioides	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as fatty acid esters. These are carboxylic ester derivatives of a fatty acid.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty acid esters

Direct Parent

Fatty acid esters

Alternative Parents

Substituents

Fatty acid ester
Methyl ester
Ortho-dioxolane
Dialkyl peroxide
Carboxylic acid ester
Oxacycle
Organoheterocyclic compound
Monocarboxylic acid or derivatives
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	7.84	ChemAxon
pKa (Strongest Basic)	-4.8	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	44.76 Å²	ChemAxon
Rotatable Bond Count	18	ChemAxon
Refractivity	114.85 m³·mol⁻¹	ChemAxon
Polarizability	51.37 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

26361888

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

49831452

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for methyl 2-[(3s,5r)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate (NP0184513)

MOL for NP0184513 (methyl 2-[(3s,5r)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate)

3D MOL for NP0184513 (methyl 2-[(3s,5r)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate)

3D SDF for NP0184513 (methyl 2-[(3s,5r)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate)

3D-SDF for NP0184513 (methyl 2-[(3s,5r)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate)

PDB for NP0184513 (methyl 2-[(3s,5r)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate)

3D PDB for NP0184513 (methyl 2-[(3s,5r)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate)

SMILES for NP0184513 (methyl 2-[(3s,5r)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate)

INCHI for NP0184513 (methyl 2-[(3s,5r)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate)

Structure for NP0184513 (methyl 2-[(3s,5r)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate)

3D Structure for NP0184513 (methyl 2-[(3s,5r)-5-hexadecyl-3,5-dimethyl-1,2-dioxolan-3-yl]acetate)