NP-MRD: Showing NP-Card for 3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-12-isopropyl-6-methyl-9-(2-methylpropyl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one (NP0184121)

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Record Information

Version

2.0

Created at

2022-09-03 23:10:28 UTC

Updated at

2022-09-03 23:10:28 UTC

NP-MRD ID

NP0184121

Secondary Accession Numbers

None

Natural Product Identification

Common Name

3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-12-isopropyl-6-methyl-9-(2-methylpropyl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one

Description

Scopularide H belongs to the class of organic compounds known as cyclic depsipeptides. These are natural or synthetic compounds having sequences of amino and hydroxy carboxylic acid residues (usually α-amino and α-hydroxy acids) connected in a ring. The residues are commonly but not necessarily regularly alternating. 3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-12-isopropyl-6-methyl-9-(2-methylpropyl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one is found in Scopulariopsis brevicaulis. Based on a literature review very few articles have been published on Scopularide H.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309042201102D          

 50 51  0  0  0  0            999 V2000
   -5.7649   -0.0694    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0504    0.3431    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3359   -0.0694    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6215    0.3431    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9070   -0.0694    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1925    0.3431    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4781   -0.0694    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7636    0.3431    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0491   -0.0694    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0491   -0.8944    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6654    0.3431    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0356    0.8761    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3479    1.6397    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0862    2.3412    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1707    1.5786    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.9078    2.0999    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    2.7827    0.9701    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3237    2.2927    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.0873    1.9804    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9759    2.7979    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6282    3.3030    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2123    3.1102    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7395    2.4856    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1300    3.2123    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.5031    2.1732    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.6145    1.3558    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3781    1.0435    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0303    1.5486    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9190    2.3661    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7939    1.2363    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9622    0.8506    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1986    1.1630    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0735    0.0332    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.4213   -0.4719    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    2.2418   -0.3525    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    3.7690   -0.9771    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    3.9916   -2.6120    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2280   -2.2997    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.8259   -0.5453    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  2  0  0  0  0
 15 16  1  4  0  0  0
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 17 18  1  0  0  0  0
 17 19  2  0  0  0  0
 19 20  1  4  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 21 23  1  0  0  0  0
 20 24  1  0  0  0  0
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 24 26  2  0  0  0  0
 26 27  1  4  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 29 31  1  0  0  0  0
 27 32  1  0  0  0  0
 32 33  1  0  0  0  0
 32 34  2  0  0  0  0
 34 35  1  4  0  0  0
 35 36  1  0  0  0  0
 35 37  1  0  0  0  0
 37 38  1  0  0  0  0
 37 39  2  0  0  0  0
 39 40  1  4  0  0  0
 40 41  1  0  0  0  0
 41 42  1  0  0  0  0
 42 43  2  0  0  0  0
 43 44  1  0  0  0  0
 44 45  2  0  0  0  0
 45 46  1  0  0  0  0
 46 47  2  0  0  0  0
 42 47  1  0  0  0  0
 40 48  1  0  0  0  0
 48 49  2  0  0  0  0
 48 50  1  0  0  0  0
 11 50  1  0  0  0  0
M  END

     RDKit          3D

111112  0  0  0  0  0  0  0  0999 V2000
    9.5970   -2.7758    2.0227 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5385   -2.4294    0.9630 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8619   -1.1307    0.2986 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8802   -0.7326   -0.7425 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4550   -0.5513   -0.2188 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.1119   -5.5872    0.7839 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -5.1477   -0.4345    1.1550 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652309042201102D          

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  1  2  1  0  0  0  0
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  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
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 11 12  1  0  0  0  0
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 35 37  1  0  0  0  0
 37 38  1  0  0  0  0
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 39 40  1  4  0  0  0
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 43 44  1  0  0  0  0
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 45 46  1  0  0  0  0
 46 47  2  0  0  0  0
 42 47  1  0  0  0  0
 40 48  1  0  0  0  0
 48 49  2  0  0  0  0
 48 50  1  0  0  0  0
 11 50  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0184121

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCCCCCCCC(C)C1CC(O)=NCC(O)=NC(C(C)C)C(O)=NC(CC(C)C)C(O)=NC(C)C(O)=NC(CC2=CC=CC=C2)C(=O)O1

> <INCHI_IDENTIFIER>
InChI=1S/C38H61N5O7/c1-8-9-10-11-12-14-17-26(6)31-22-32(44)39-23-33(45)43-34(25(4)5)37(48)41-29(20-24(2)3)36(47)40-27(7)35(46)42-30(38(49)50-31)21-28-18-15-13-16-19-28/h13,15-16,18-19,24-27,29-31,34H,8-12,14,17,20-23H2,1-7H3,(H,39,44)(H,40,47)(H,41,48)(H,42,46)(H,43,45)

> <INCHI_KEY>
RALTUMFCLLNZRF-UHFFFAOYSA-N

> <FORMULA>
C38H61N5O7

> <MOLECULAR_WEIGHT>
699.934

> <EXACT_MASS>
699.457099324

> <JCHEM_ACCEPTOR_COUNT>
11

> <JCHEM_ATOM_COUNT>
111

> <JCHEM_AVERAGE_POLARIZABILITY>
79.26469106551082

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-6-methyl-9-(2-methylpropyl)-12-(propan-2-yl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one

> <JCHEM_LOGP>
8.519012174747807

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
3.8470487045210375

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.3446401115082702

> <JCHEM_PKA_STRONGEST_BASIC>
2.3885054382750672

> <JCHEM_POLAR_SURFACE_AREA>
189.24999999999997

> <JCHEM_REFRACTIVITY>
193.06429999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
13

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-12-isopropyl-6-methyl-9-(2-methylpropyl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 04-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   04-SEP-22         0                                  
HETATM    1  C   UNK     0     -10.761  -0.130   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -9.427   0.640   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -8.094  -0.130   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -6.760   0.640   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -5.426  -0.130   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -4.093   0.640   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -2.759  -0.130   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.425   0.640   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -0.092  -0.130   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.092  -1.670   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.242   0.640   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       0.067   1.635   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.650   3.061   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0      -0.161   4.370   0.000  0.00  0.00           O+0
HETATM   15  N   UNK     0       2.185   2.947   0.000  0.00  0.00           N+0
HETATM   16  C   UNK     0       3.561   3.920   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.987   3.337   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0       5.194   1.811   0.000  0.00  0.00           O+0
HETATM   19  N   UNK     0       6.204   4.280   0.000  0.00  0.00           N+0
HETATM   20  C   UNK     0       7.630   3.697   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       7.422   5.223   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       8.639   6.166   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       5.996   5.806   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       8.847   4.640   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       9.576   5.996   0.000  0.00  0.00           O+0
HETATM   26  N   UNK     0      10.273   4.057   0.000  0.00  0.00           N+0
HETATM   27  C   UNK     0      10.480   2.531   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      11.906   1.948   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      13.123   2.891   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      12.915   4.417   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      14.549   2.308   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       9.263   1.588   0.000  0.00  0.00           C+0
HETATM   33  O   UNK     0       7.837   2.171   0.000  0.00  0.00           O+0
HETATM   34  N   UNK     0       9.471   0.062   0.000  0.00  0.00           N+0
HETATM   35  C   UNK     0       8.253  -0.881   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0       9.318  -1.993   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0       6.828  -0.298   0.000  0.00  0.00           C+0
HETATM   38  O   UNK     0       6.620   1.228   0.000  0.00  0.00           O+0
HETATM   39  N   UNK     0       5.610  -1.241   0.000  0.00  0.00           N+0
HETATM   40  C   UNK     0       4.185  -0.658   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0       4.392  -2.184   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0       5.818  -2.767   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0       7.035  -1.824   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0       8.461  -2.407   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0       8.669  -3.933   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0       7.451  -4.876   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0       6.026  -4.293   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0       2.967  -1.601   0.000  0.00  0.00           C+0
HETATM   49  O   UNK     0       3.175  -3.127   0.000  0.00  0.00           O+0
HETATM   50  O   UNK     0       1.542  -1.018   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12   50                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17   20                                                       
CONECT   20   19   21   24                                                  
CONECT   21   20   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21                                                            
CONECT   24   20   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   27                                                       
CONECT   27   26   28   32                                                  
CONECT   28   27   29                                                       
CONECT   29   28   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29                                                            
CONECT   32   27   33   34                                                  
CONECT   33   32                                                            
CONECT   34   32   35                                                       
CONECT   35   34   36   37                                                  
CONECT   36   35                                                            
CONECT   37   35   38   39                                                  
CONECT   38   37                                                            
CONECT   39   37   40                                                       
CONECT   40   39   41   48                                                  
CONECT   41   40   42                                                       
CONECT   42   41   43   47                                                  
CONECT   43   42   44                                                       
CONECT   44   43   45                                                       
CONECT   45   44   46                                                       
CONECT   46   45   47                                                       
CONECT   47   46   42                                                       
CONECT   48   40   49   50                                                  
CONECT   49   48                                                            
CONECT   50   48   11                                                       
MASTER        0    0    0    0    0    0    0    0   50    0  102    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₈H₆₁N₅O₇

Average Mass

699.9340 Da

Monoisotopic Mass

699.45710 Da

IUPAC Name

3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-6-methyl-9-(2-methylpropyl)-12-(propan-2-yl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one

Traditional Name

3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-12-isopropyl-6-methyl-9-(2-methylpropyl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one

CAS Registry Number

Not Available

SMILES

CCCCCCCCC(C)C1CC(O)=NCC(O)=NC(C(C)C)C(O)=NC(CC(C)C)C(O)=NC(C)C(O)=NC(CC2=CC=CC=C2)C(=O)O1

InChI Identifier

InChI=1S/C38H61N5O7/c1-8-9-10-11-12-14-17-26(6)31-22-32(44)39-23-33(45)43-34(25(4)5)37(48)41-29(20-24(2)3)36(47)40-27(7)35(46)42-30(38(49)50-31)21-28-18-15-13-16-19-28/h13,15-16,18-19,24-27,29-31,34H,8-12,14,17,20-23H2,1-7H3,(H,39,44)(H,40,47)(H,41,48)(H,42,46)(H,43,45)

InChI Key

RALTUMFCLLNZRF-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Scopulariopsis brevicaulis	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as cyclic depsipeptides. These are natural or synthetic compounds having sequences of amino and hydroxy carboxylic acid residues (usually α-amino and α-hydroxy acids) connected in a ring. The residues are commonly but not necessarily regularly alternating.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Peptidomimetics

Sub Class

Depsipeptides

Direct Parent

Cyclic depsipeptides

Alternative Parents

Substituents

Cyclic depsipeptide
Macrolide lactam
Macrolide
Macrolactam
Alpha-amino acid ester
Alpha-amino acid or derivatives
Benzenoid
Monocyclic benzene moiety
Secondary carboxylic acid amide
Lactone
Lactam
Carboxylic acid ester
Carboxamide group
Oxacycle
Azacycle
Organoheterocyclic compound
Monocarboxylic acid or derivatives
Carboxylic acid derivative
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Carbonyl group
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	8.52	ChemAxon
pKa (Strongest Acidic)	3.34	ChemAxon
pKa (Strongest Basic)	2.39	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	11	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	189.25 Å²	ChemAxon
Rotatable Bond Count	13	ChemAxon
Refractivity	193.06 m³·mol⁻¹	ChemAxon
Polarizability	79.26 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139292037

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-12-isopropyl-6-methyl-9-(2-methylpropyl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one (NP0184121)

MOL for NP0184121 (3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-12-isopropyl-6-methyl-9-(2-methylpropyl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one)

3D MOL for NP0184121 (3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-12-isopropyl-6-methyl-9-(2-methylpropyl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one)

3D SDF for NP0184121 (3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-12-isopropyl-6-methyl-9-(2-methylpropyl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one)

3D-SDF for NP0184121 (3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-12-isopropyl-6-methyl-9-(2-methylpropyl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one)

PDB for NP0184121 (3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-12-isopropyl-6-methyl-9-(2-methylpropyl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one)

3D PDB for NP0184121 (3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-12-isopropyl-6-methyl-9-(2-methylpropyl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one)

SMILES for NP0184121 (3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-12-isopropyl-6-methyl-9-(2-methylpropyl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one)

INCHI for NP0184121 (3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-12-isopropyl-6-methyl-9-(2-methylpropyl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one)

Structure for NP0184121 (3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-12-isopropyl-6-methyl-9-(2-methylpropyl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one)

3D Structure for NP0184121 (3-benzyl-19-(decan-2-yl)-5,8,11,14,17-pentahydroxy-12-isopropyl-6-methyl-9-(2-methylpropyl)-1-oxa-4,7,10,13,16-pentaazacyclononadeca-4,7,10,13,16-pentaen-2-one)