NP-MRD: Showing NP-Card for (3s,4s)-3,5,8-trihydroxy-6-methyl-4-[(1r,12s,13s,14r)-4,7,11,13-tetrahydroxy-5-methyl-2,9-dioxotetracyclo[8.4.0.0¹,¹².0³,⁸]tetradeca-3,5,7,10-tetraen-14-yl]-3,4-dihydro-2h-anthracene-1,9,10-trione (NP0183509)

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Record Information

Version

2.0

Created at

2022-09-03 22:25:45 UTC

Updated at

2022-09-03 22:25:45 UTC

NP-MRD ID

NP0183509

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(3s,4s)-3,5,8-trihydroxy-6-methyl-4-[(1r,12s,13s,14r)-4,7,11,13-tetrahydroxy-5-methyl-2,9-dioxotetracyclo[8.4.0.0¹,¹².0³,⁸]tetradeca-3,5,7,10-tetraen-14-yl]-3,4-dihydro-2h-anthracene-1,9,10-trione

Description

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309042200252D          

 42 48  0  0  1  0            999 V2000
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M  END

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M  END


  Mrv1652309042200252D          

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  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  2  8  1  0  0  0  0
  8  9  1  0  0  0  0
  7 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  1  0  0  0
 17 19  1  0  0  0  0
 12 19  1  0  0  0  0
 19 20  1  6  0  0  0
 20 21  1  1  0  0  0
 21 22  1  6  0  0  0
 21 23  1  0  0  0  0
 23 24  1  1  0  0  0
 24 25  1  0  0  0  0
 24 26  2  0  0  0  0
 26 27  1  0  0  0  0
 27 28  2  0  0  0  0
 27 29  1  0  0  0  0
 29 30  2  0  0  0  0
 30 31  1  0  0  0  0
 30 32  1  0  0  0  0
 32 33  2  0  0  0  0
 33 34  1  0  0  0  0
 33 35  1  0  0  0  0
 35 36  1  0  0  0  0
 35 37  2  0  0  0  0
 29 37  1  0  0  0  0
 37 38  1  0  0  0  0
 38 39  2  0  0  0  0
 38 40  1  0  0  0  0
 40 26  1  1  0  0  0
 23 40  1  0  0  0  0
 20 40  1  0  0  0  0
 13 41  1  0  0  0  0
  6 41  1  0  0  0  0
 41 42  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0183509

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC1=CC(O)=C2C(=O)C3=C([C@H]([C@H]4[C@H](O)[C@H]5C(O)=C6C(=O)C7=C(O)C=C(C)C(O)=C7C(=O)[C@]456)[C@@H](O)CC3=O)C(=O)C2=C1O

> <INCHI_IDENTIFIER>
InChI=1S/C30H22O12/c1-6-3-8(31)14-17(22(6)35)25(38)16-12(10(33)5-11(34)13(16)24(14)37)19-27(40)21-28(41)20-26(39)15-9(32)4-7(2)23(36)18(15)29(42)30(19,20)21/h3-4,10,12,19,21,27,31-33,35-36,40-41H,5H2,1-2H3/t10-,12+,19-,21-,27-,30-/m0/s1

> <INCHI_KEY>
FCOVNKPWXVMTNL-WNPOQBJPSA-N

> <FORMULA>
C30H22O12

> <MOLECULAR_WEIGHT>
574.494

> <EXACT_MASS>
574.111126148

> <JCHEM_ACCEPTOR_COUNT>
12

> <JCHEM_ATOM_COUNT>
64

> <JCHEM_AVERAGE_POLARIZABILITY>
55.18246523997887

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
7

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(3S,4S)-3,5,8-trihydroxy-6-methyl-4-[(1R,12S,13S,14R)-4,7,11,13-tetrahydroxy-5-methyl-2,9-dioxotetracyclo[8.4.0.0^{1,12}.0^{3,8}]tetradeca-3,5,7,10-tetraen-14-yl]-1,2,3,4,9,10-hexahydroanthracene-1,9,10-trione

> <JCHEM_LOGP>
2.497128576333334

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
7

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
8.397649405140397

> <JCHEM_PKA_STRONGEST_ACIDIC>
7.836608395684266

> <JCHEM_PKA_STRONGEST_BASIC>
-2.948777060928064

> <JCHEM_POLAR_SURFACE_AREA>
226.95999999999995

> <JCHEM_REFRACTIVITY>
144.5742

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(3S,4S)-3,5,8-trihydroxy-6-methyl-4-[(1R,12S,13S,14R)-4,7,11,13-tetrahydroxy-5-methyl-2,9-dioxotetracyclo[8.4.0.0^{1,12}.0^{3,8}]tetradeca-3,5,7,10-tetraen-14-yl]-3,4-dihydro-2H-anthracene-1,9,10-trione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 04-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   04-SEP-22         0                                  
HETATM    1  C   UNK     0      -3.682  -5.280   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -2.077  -5.294   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -1.375  -6.665   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       0.163  -6.743   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0       0.709  -8.250   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0       0.999  -5.450   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.298  -4.079   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.241  -4.001   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0      -2.432  -2.920   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0       1.134  -2.786   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0      -0.041  -1.579   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0       2.672  -2.863   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       3.374  -4.234   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       4.912  -4.312   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       5.589  -5.793   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       5.748  -3.019   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       5.046  -1.648   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0       5.985  -0.419   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0       3.508  -1.570   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       2.806  -0.199   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       1.341   0.274   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0       0.012  -0.389   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0       1.814   1.739   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       2.287   3.205   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       1.522   4.597   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       3.752   2.732   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       5.258   3.055   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       5.548   4.631   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0       6.291   1.912   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       7.796   2.236   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0       8.465   3.700   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0       8.829   1.093   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       8.356  -0.372   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       9.693  -1.325   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0       6.850  -0.696   0.000  0.00  0.00           C+0
HETATM   36  O   UNK     0       7.430  -2.316   0.000  0.00  0.00           O+0
HETATM   37  C   UNK     0       5.818   0.447   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0       4.312   0.124   0.000  0.00  0.00           C+0
HETATM   39  O   UNK     0       5.064  -0.836   0.000  0.00  0.00           O+0
HETATM   40  C   UNK     0       3.279   1.266   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0       2.537  -5.527   0.000  0.00  0.00           C+0
HETATM   42  O   UNK     0       3.235  -6.968   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3    8                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7   41                                                  
CONECT    7    6    8   10                                                  
CONECT    8    7    2    9                                                  
CONECT    9    8                                                            
CONECT   10    7   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13   19                                                  
CONECT   13   12   14   41                                                  
CONECT   14   13   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17                                                       
CONECT   17   16   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17   12   20                                                  
CONECT   20   19   21   40                                                  
CONECT   21   20   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21   24   40                                                  
CONECT   24   23   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   27   40                                                  
CONECT   27   26   28   29                                                  
CONECT   28   27                                                            
CONECT   29   27   30   37                                                  
CONECT   30   29   31   32                                                  
CONECT   31   30                                                            
CONECT   32   30   33                                                       
CONECT   33   32   34   35                                                  
CONECT   34   33                                                            
CONECT   35   33   36   37                                                  
CONECT   36   35                                                            
CONECT   37   35   29   38                                                  
CONECT   38   37   39   40                                                  
CONECT   39   38                                                            
CONECT   40   38   26   23   20                                             
CONECT   41   13    6   42                                                  
CONECT   42   41                                                            
MASTER        0    0    0    0    0    0    0    0   42    0   96    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₀H₂₂O₁₂

Average Mass

574.4940 Da

Monoisotopic Mass

574.11113 Da

IUPAC Name

(3S,4S)-3,5,8-trihydroxy-6-methyl-4-[(1R,12S,13S,14R)-4,7,11,13-tetrahydroxy-5-methyl-2,9-dioxotetracyclo[8.4.0.0^{1,12}.0^{3,8}]tetradeca-3,5,7,10-tetraen-14-yl]-1,2,3,4,9,10-hexahydroanthracene-1,9,10-trione

Traditional Name

CAS Registry Number

Not Available

SMILES

CC1=CC(O)=C2C(=O)C3=C([C@H]([C@H]4[C@H](O)[C@H]5C(O)=C6C(=O)C7=C(O)C=C(C)C(O)=C7C(=O)[C@]456)[C@@H](O)CC3=O)C(=O)C2=C1O

InChI Identifier

InChI=1S/C30H22O12/c1-6-3-8(31)14-17(22(6)35)25(38)16-12(10(33)5-11(34)13(16)24(14)37)19-27(40)21-28(41)20-26(39)15-9(32)4-7(2)23(36)18(15)29(42)30(19,20)21/h3-4,10,12,19,21,27,31-33,35-36,40-41H,5H2,1-2H3/t10-,12+,19-,21-,27-,30-/m0/s1

InChI Key

FCOVNKPWXVMTNL-WNPOQBJPSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Talaromyces islandicus	LOTUS Database	35616633

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.5	ChemAxon
pKa (Strongest Acidic)	7.84	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	12	ChemAxon
Hydrogen Donor Count	7	ChemAxon
Polar Surface Area	226.96 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	144.57 m³·mol⁻¹	ChemAxon
Polarizability	55.18 Å³	ChemAxon
Number of Rings	7	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (3s,4s)-3,5,8-trihydroxy-6-methyl-4-[(1r,12s,13s,14r)-4,7,11,13-tetrahydroxy-5-methyl-2,9-dioxotetracyclo[8.4.0.0¹,¹².0³,⁸]tetradeca-3,5,7,10-tetraen-14-yl]-3,4-dihydro-2h-anthracene-1,9,10-trione (NP0183509)

MOL for NP0183509 ((3s,4s)-3,5,8-trihydroxy-6-methyl-4-[(1r,12s,13s,14r)-4,7,11,13-tetrahydroxy-5-methyl-2,9-dioxotetracyclo[8.4.0.0¹,¹².0³,⁸]tetradeca-3,5,7,10-tetraen-14-yl]-3,4-dihydro-2h-anthracene-1,9,10-trione)

3D MOL for NP0183509 ((3s,4s)-3,5,8-trihydroxy-6-methyl-4-[(1r,12s,13s,14r)-4,7,11,13-tetrahydroxy-5-methyl-2,9-dioxotetracyclo[8.4.0.0¹,¹².0³,⁸]tetradeca-3,5,7,10-tetraen-14-yl]-3,4-dihydro-2h-anthracene-1,9,10-trione)

3D SDF for NP0183509 ((3s,4s)-3,5,8-trihydroxy-6-methyl-4-[(1r,12s,13s,14r)-4,7,11,13-tetrahydroxy-5-methyl-2,9-dioxotetracyclo[8.4.0.0¹,¹².0³,⁸]tetradeca-3,5,7,10-tetraen-14-yl]-3,4-dihydro-2h-anthracene-1,9,10-trione)

3D-SDF for NP0183509 ((3s,4s)-3,5,8-trihydroxy-6-methyl-4-[(1r,12s,13s,14r)-4,7,11,13-tetrahydroxy-5-methyl-2,9-dioxotetracyclo[8.4.0.0¹,¹².0³,⁸]tetradeca-3,5,7,10-tetraen-14-yl]-3,4-dihydro-2h-anthracene-1,9,10-trione)

PDB for NP0183509 ((3s,4s)-3,5,8-trihydroxy-6-methyl-4-[(1r,12s,13s,14r)-4,7,11,13-tetrahydroxy-5-methyl-2,9-dioxotetracyclo[8.4.0.0¹,¹².0³,⁸]tetradeca-3,5,7,10-tetraen-14-yl]-3,4-dihydro-2h-anthracene-1,9,10-trione)

3D PDB for NP0183509 ((3s,4s)-3,5,8-trihydroxy-6-methyl-4-[(1r,12s,13s,14r)-4,7,11,13-tetrahydroxy-5-methyl-2,9-dioxotetracyclo[8.4.0.0¹,¹².0³,⁸]tetradeca-3,5,7,10-tetraen-14-yl]-3,4-dihydro-2h-anthracene-1,9,10-trione)

SMILES for NP0183509 ((3s,4s)-3,5,8-trihydroxy-6-methyl-4-[(1r,12s,13s,14r)-4,7,11,13-tetrahydroxy-5-methyl-2,9-dioxotetracyclo[8.4.0.0¹,¹².0³,⁸]tetradeca-3,5,7,10-tetraen-14-yl]-3,4-dihydro-2h-anthracene-1,9,10-trione)

INCHI for NP0183509 ((3s,4s)-3,5,8-trihydroxy-6-methyl-4-[(1r,12s,13s,14r)-4,7,11,13-tetrahydroxy-5-methyl-2,9-dioxotetracyclo[8.4.0.0¹,¹².0³,⁸]tetradeca-3,5,7,10-tetraen-14-yl]-3,4-dihydro-2h-anthracene-1,9,10-trione)

Structure for NP0183509 ((3s,4s)-3,5,8-trihydroxy-6-methyl-4-[(1r,12s,13s,14r)-4,7,11,13-tetrahydroxy-5-methyl-2,9-dioxotetracyclo[8.4.0.0¹,¹².0³,⁸]tetradeca-3,5,7,10-tetraen-14-yl]-3,4-dihydro-2h-anthracene-1,9,10-trione)

3D Structure for NP0183509 ((3s,4s)-3,5,8-trihydroxy-6-methyl-4-[(1r,12s,13s,14r)-4,7,11,13-tetrahydroxy-5-methyl-2,9-dioxotetracyclo[8.4.0.0¹,¹².0³,⁸]tetradeca-3,5,7,10-tetraen-14-yl]-3,4-dihydro-2h-anthracene-1,9,10-trione)