NP-MRD: Showing NP-Card for 3-methoxy-2-phenyl-6-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one (NP0183489)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-03 22:24:19 UTC

Updated at

2022-09-03 22:24:20 UTC

NP-MRD ID

NP0183489

Secondary Accession Numbers

None

Natural Product Identification

Common Name

3-methoxy-2-phenyl-6-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one

Description

Pongamoside c belongs to the class of organic compounds known as flavonoid o-glycosides. Flavonoid O-glycosides are compounds containing a carbohydrate moiety which is O-glycosidically linked to the 2-phenylchromen-4-one flavonoid backbone. Thus, pongamoside c is considered to be a flavonoid. 3-methoxy-2-phenyl-6-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one is found in Hyoscyamus niger and Pongamia pinnata. 3-methoxy-2-phenyl-6-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one was first documented in 2009 (PMID: 19401911). Based on a literature review very few articles have been published on Pongamoside c (PMID: 35352937).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309042200242D          

 34 38  0  0  1  0            999 V2000
    6.3850   -0.3660    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9950    0.3610    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1704    0.3867    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7804    1.1137    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2150    1.8150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8250    2.5420    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2596    3.2432    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0842    3.2175    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4742    2.4905    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0396    1.7892    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9558    1.1395    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5212    0.4383    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9112   -0.2887    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4766   -0.9900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6520   -0.9642    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2174   -1.6655    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3928   -1.6397    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.0028   -0.9127    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1782   -0.8869    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2118   -0.1599    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2228    0.5413    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2564   -1.5882    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0810   -1.5624    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1336   -2.3152    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3011   -3.0164    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9582   -2.3409    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3481   -3.0679    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2620   -0.2372    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4608   -0.0406    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4002    0.7822    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1640    1.0941    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6966    0.4640    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7358   -0.3145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1258   -1.0415    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  5 10  1  0  0  0  0
  4 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 17 16  1  1  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  1  0  0  0
 20 21  1  0  0  0  0
 19 22  1  0  0  0  0
 22 23  1  6  0  0  0
 22 24  1  0  0  0  0
 24 25  1  1  0  0  0
 24 26  1  0  0  0  0
 17 26  1  0  0  0  0
 26 27  1  6  0  0  0
 15 28  2  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  2  0  0  0  0
 31 32  1  0  0  0  0
 28 32  1  0  0  0  0
 12 32  2  0  0  0  0
 13 33  1  0  0  0  0
  3 33  1  0  0  0  0
 33 34  2  0  0  0  0
M  END

     RDKit          3D

 56 60  0  0  0  0  0  0  0  0999 V2000
    5.1956    2.8265   -1.3987 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8172    2.3260   -0.1140 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7982    1.3834   -0.0346 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0574    0.0527   -0.0454 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3637   -0.5506   -0.1260 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4395   -1.9307   -0.3944 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6180   -2.6106   -0.4507 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7893   -1.9248   -0.2371 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7514   -0.5905    0.0253 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5454    0.1054    0.0838 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9922   -0.7640    0.0240 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7640   -0.3661    0.1010 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4722    0.9823    0.1164 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1800    1.3917    0.1976 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8565    0.4483    0.2658 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1197    0.9246    0.3451 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3257    0.2556    0.4234 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0957    0.6831   -0.6576 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3705    0.1980   -0.6687 C   0  0  2  0  0  0  0  0  0  0  0  0
   -6.2941    1.3168   -1.1272 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6112    0.9313   -1.1741 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8315   -0.4493    0.5895 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.3021   -1.7599    0.6265 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3991    0.2339    1.8446 C   0  0  2  0  0  0  0  0  0  0  0  0
   -6.1872    1.3428    2.1602 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9681    0.6426    1.7445 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.2535   -0.0359    2.7457 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5803   -0.9012    0.2514 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2849   -2.0006    0.2988 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5551   -3.0818    0.2549 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7564   -2.6950    0.1705 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7529   -1.3182    0.1676 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4823    1.8937    0.0489 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2894    3.1303    0.0582 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9320    2.0729   -2.1700 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6526    3.7643   -1.6013 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2816    2.9874   -1.3866 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4982   -2.4604   -0.5634 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5958   -3.6691   -0.6619 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.7460   -2.4361   -0.2754 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.6610   -0.0263    0.1975 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5834    1.1526    0.3227 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0509    2.4584    0.2098 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1672   -0.8335    0.4155 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4268   -0.5837   -1.4821 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9834    1.5752   -2.1659 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1320    2.2438   -0.5289 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2008    1.4922   -0.6108 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9309   -0.5877    0.5208 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4549   -2.1997   -0.2270 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5726   -0.4974    2.6879 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6492    2.1737    2.2548 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8418    1.7253    1.9320 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3255   -1.0238    2.5539 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9014   -4.1231    0.2793 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6569   -3.2946    0.1147 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4 11  1  0
 11 12  1  0
 12 32  2  0
 32 31  1  0
 31 30  2  0
 30 29  1  0
 29 28  1  0
 28 15  2  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 19 22  1  0
 22 23  1  0
 22 24  1  0
 24 25  1  0
 24 26  1  0
 26 27  1  0
 15 14  1  0
 14 13  2  0
 13 33  1  0
 33 34  2  0
  4  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  2  0
 33  3  1  0
 10  5  1  0
 13 12  1  0
 28 32  1  0
 26 17  1  0
  1 35  1  0
  1 36  1  0
  1 37  1  0
 31 56  1  0
 30 55  1  0
 17 44  1  1
 19 45  1  6
 20 46  1  0
 20 47  1  0
 21 48  1  0
 22 49  1  6
 23 50  1  0
 24 51  1  1
 25 52  1  0
 26 53  1  1
 27 54  1  0
 14 43  1  0
  6 38  1  0
  7 39  1  0
  8 40  1  0
  9 41  1  0
 10 42  1  0
M  END


  Mrv1652309042200242D          

 34 38  0  0  1  0            999 V2000
    6.3850   -0.3660    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9950    0.3610    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1704    0.3867    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7804    1.1137    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2150    1.8150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8250    2.5420    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2596    3.2432    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0842    3.2175    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4742    2.4905    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0396    1.7892    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9558    1.1395    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5212    0.4383    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9112   -0.2887    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4766   -0.9900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6520   -0.9642    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2174   -1.6655    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3928   -1.6397    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.0028   -0.9127    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1782   -0.8869    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2118   -0.1599    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2228    0.5413    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2564   -1.5882    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0810   -1.5624    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1336   -2.3152    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3011   -3.0164    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9582   -2.3409    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3481   -3.0679    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2620   -0.2372    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4608   -0.0406    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4002    0.7822    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1640    1.0941    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6966    0.4640    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7358   -0.3145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1258   -1.0415    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  5 10  1  0  0  0  0
  4 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 17 16  1  1  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  1  0  0  0
 20 21  1  0  0  0  0
 19 22  1  0  0  0  0
 22 23  1  6  0  0  0
 22 24  1  0  0  0  0
 24 25  1  1  0  0  0
 24 26  1  0  0  0  0
 17 26  1  0  0  0  0
 26 27  1  6  0  0  0
 15 28  2  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  2  0  0  0  0
 31 32  1  0  0  0  0
 28 32  1  0  0  0  0
 12 32  2  0  0  0  0
 13 33  1  0  0  0  0
  3 33  1  0  0  0  0
 33 34  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0183489

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=C(OC2=C3C=COC3=C(O[C@@H]3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3O)C=C2C1=O)C1=CC=CC=C1

> <INCHI_IDENTIFIER>
InChI=1S/C24H22O10/c1-30-23-16(26)13-9-14(32-24-19(29)18(28)17(27)15(10-25)33-24)22-12(7-8-31-22)21(13)34-20(23)11-5-3-2-4-6-11/h2-9,15,17-19,24-25,27-29H,10H2,1H3/t15-,17-,18+,19-,24-/m1/s1

> <INCHI_KEY>
ADILGNQVWRXLRO-COYHTZKBSA-N

> <FORMULA>
C24H22O10

> <MOLECULAR_WEIGHT>
470.43

> <EXACT_MASS>
470.121296908

> <JCHEM_ACCEPTOR_COUNT>
9

> <JCHEM_ATOM_COUNT>
56

> <JCHEM_AVERAGE_POLARIZABILITY>
46.732382435833884

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
3-methoxy-2-phenyl-6-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-4H-furo[2,3-h]chromen-4-one

> <JCHEM_LOGP>
0.4208781256666667

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.196043279797781

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.20001370422697

> <JCHEM_PKA_STRONGEST_BASIC>
-2.918279604330752

> <JCHEM_POLAR_SURFACE_AREA>
148.05

> <JCHEM_REFRACTIVITY>
116.65620000000003

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
3-methoxy-2-phenyl-6-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 04-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   04-SEP-22         0                                  
HETATM    1  C   UNK     0      11.919  -0.683   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0      11.191   0.674   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       9.651   0.722   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       8.923   2.079   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       9.735   3.388   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       9.007   4.745   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       9.818   6.054   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      11.357   6.006   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      12.085   4.649   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      11.274   3.340   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       7.384   2.127   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0       6.573   0.818   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       7.301  -0.539   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       6.490  -1.848   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       4.950  -1.800   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       4.139  -3.109   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0       2.600  -3.061   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0       1.872  -1.704   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0       0.333  -1.656   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -0.395  -0.299   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       0.416   1.010   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0      -0.479  -2.965   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      -2.018  -2.916   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       0.249  -4.322   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0      -0.562  -5.631   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       1.789  -4.370   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       2.517  -5.727   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0       4.222  -0.443   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0       2.727  -0.076   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0       2.614   1.460   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       4.039   2.042   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       5.034   0.866   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       8.840  -0.587   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0       9.568  -1.944   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   33                                                  
CONECT    4    3    5   11                                                  
CONECT    5    4    6   10                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9    5                                                       
CONECT   11    4   12                                                       
CONECT   12   11   13   32                                                  
CONECT   13   12   14   33                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16   28                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18   26                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20   22                                                  
CONECT   20   19   21                                                       
CONECT   21   20                                                            
CONECT   22   19   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   17   27                                                  
CONECT   27   26                                                            
CONECT   28   15   29   32                                                  
CONECT   29   28   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   28   12                                                  
CONECT   33   13    3   34                                                  
CONECT   34   33                                                            
MASTER        0    0    0    0    0    0    0    0   34    0   76    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₄H₂₂O₁₀

Average Mass

470.4300 Da

Monoisotopic Mass

470.12130 Da

IUPAC Name

3-methoxy-2-phenyl-6-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-4H-furo[2,3-h]chromen-4-one

Traditional Name

3-methoxy-2-phenyl-6-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one

CAS Registry Number

Not Available

SMILES

COC1=C(OC2=C3C=COC3=C(O[C@@H]3O[C@H](CO)[C@@H](O)[C@H](O)[C@H]3O)C=C2C1=O)C1=CC=CC=C1

InChI Identifier

InChI=1S/C24H22O10/c1-30-23-16(26)13-9-14(32-24-19(29)18(28)17(27)15(10-25)33-24)22-12(7-8-31-22)21(13)34-20(23)11-5-3-2-4-6-11/h2-9,15,17-19,24-25,27-29H,10H2,1H3/t15-,17-,18+,19-,24-/m1/s1

InChI Key

ADILGNQVWRXLRO-COYHTZKBSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Hyoscyamus niger	LOTUS Database	35616633
Pongamia pinnata	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as flavonoid o-glycosides. Flavonoid O-glycosides are compounds containing a carbohydrate moiety which is O-glycosidically linked to the 2-phenylchromen-4-one flavonoid backbone.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Flavonoids

Sub Class

Flavonoid glycosides

Direct Parent

Flavonoid O-glycosides

Alternative Parents

Substituents

Flavonoid-6-o-glycoside
Flavonoid o-glycoside
Furanoflavone
Furanoflavonoid or dihydroflavonoid
3-methoxyflavonoid-skeleton
Flavone
Phenolic glycoside
3-methoxychromone
Hexose monosaccharide
O-glycosyl compound
Chromone
Glycosyl compound
Benzopyran
1-benzopyran
Benzofuran
Alkyl aryl ether
Pyranone
Monocyclic benzene moiety
Benzenoid
Pyran
Oxane
Monosaccharide
Heteroaromatic compound
Furan
Secondary alcohol
Acetal
Organoheterocyclic compound
Ether
Oxacycle
Polyol
Primary alcohol
Alcohol
Hydrocarbon derivative
Organic oxygen compound
Organic oxide
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.42	ChemAxon
pKa (Strongest Acidic)	12.2	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	9	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	148.05 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	116.66 m³·mol⁻¹	ChemAxon
Polarizability	46.73 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00011169

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101731480

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Dong H, Wu M, Li Y, Lu L, Qin J, He Y, Shi Z: Total Syntheses and Anti-inflammatory Evaluations of Pongamosides A-C, Natural Furanoflavonoid Glucosides from Fruit of Pongamia pinnata (L.) Pierre. J Nat Prod. 2022 Apr 22;85(4):1118-1127. doi: 10.1021/acs.jnatprod.2c00021. Epub 2022 Mar 30. [PubMed:35352937 ]
Begum AS, Verma S, Sahai M, Schneider K, Sussmuth R: Hyoscyamal, a new tetrahydrofurano lignan from Hyoscyamus niger Linn. Nat Prod Res. 2009;23(7):595-600. doi: 10.1080/14786410802113961. [PubMed:19401911 ]
LOTUS database [Link]

Showing NP-Card for 3-methoxy-2-phenyl-6-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one (NP0183489)

MOL for NP0183489 (3-methoxy-2-phenyl-6-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one)

3D MOL for NP0183489 (3-methoxy-2-phenyl-6-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one)

3D SDF for NP0183489 (3-methoxy-2-phenyl-6-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one)

3D-SDF for NP0183489 (3-methoxy-2-phenyl-6-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one)

PDB for NP0183489 (3-methoxy-2-phenyl-6-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one)

3D PDB for NP0183489 (3-methoxy-2-phenyl-6-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one)

SMILES for NP0183489 (3-methoxy-2-phenyl-6-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one)

INCHI for NP0183489 (3-methoxy-2-phenyl-6-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one)

Structure for NP0183489 (3-methoxy-2-phenyl-6-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one)

3D Structure for NP0183489 (3-methoxy-2-phenyl-6-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}furo[2,3-h]chromen-4-one)