NP-MRD: Showing NP-Card for 18,18-dibromooctadec-17-en-5,7-diynoic acid (NP0182741)

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Record Information

Version

2.0

Created at

2022-09-03 21:31:35 UTC

Updated at

2022-09-03 21:31:35 UTC

NP-MRD ID

NP0182741

Secondary Accession Numbers

None

Natural Product Identification

Common Name

18,18-dibromooctadec-17-en-5,7-diynoic acid

Description

18,18-Dibromooctadec-17-en-5,7-diynoic acid belongs to the class of organic compounds known as long-chain fatty acids. These are fatty acids with an aliphatic tail that contains between 13 and 21 carbon atoms. 18,18-dibromooctadec-17-en-5,7-diynoic acid is found in Leptogium saturninum. Based on a literature review very few articles have been published on 18,18-dibromooctadec-17-en-5,7-diynoic acid.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 46 45  0  0  0  0  0  0  0  0999 V2000
    8.9642    1.3903   -1.7277 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.0333    0.5957   -1.9890 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6122    0.4197   -3.2992 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3400   -0.1867   -0.9445 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9148    0.1155    0.4418 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1074   -0.7578    1.4129 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6867   -0.4123    1.3418 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5153   -0.1193    1.2669 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1475    0.2261    1.1571 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9814    0.5193    1.0427 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5700    0.8704    0.8789 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0479   -0.1314   -0.0962 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5186    0.2753   -0.2363 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2212   -0.6662   -1.1907 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6539   -0.2432   -1.3100 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3784   -0.2785    0.0142 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8331    0.1579   -0.1606 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4780    0.0910    1.2142 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8831    0.5026    1.1009 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8437   -0.3436    1.4472 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.6837    0.1552    1.3139 Br  0  0  0  0  0  0  0  0  0  0  0  0
   -8.3927   -2.0876    2.0891 Br  0  0  0  0  0  0  0  0  0  0  0  0
    7.1961    1.1961   -3.8066 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2646   -0.0166   -0.9635 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5522   -1.2673   -1.1542 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.6521    1.1748    0.6491 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.9777   -0.1091    0.4940 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4954   -0.6383    2.4235 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2185   -1.8027    1.0203 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4109    1.9051    0.5454 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1017    0.7826    1.8807 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0670   -1.1464    0.3484 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4787   -0.1558   -1.0478 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9354    0.1777    0.7837 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5266    1.2996   -0.6354 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7784   -0.6248   -2.2038 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1137   -1.7090   -0.8480 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1500   -0.9648   -2.0009 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7632    0.7457   -1.7631 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3183   -1.2878    0.4603 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9502    0.4317    0.7479 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3070   -0.5409   -0.8603 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9032    1.1775   -0.5382 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8859    0.7337    1.8997 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4123   -0.9495    1.5510 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1755    1.4960    0.7363 H   0  0  0  0  0  0  0  0  0  0  0  0
  3  2  1  0
  2  1  2  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  3  0
  8  9  1  0
  9 10  3  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  2  3
 20 21  1  0
 20 22  1  0
  3 23  1  0
  4 24  1  0
  4 25  1  0
  5 26  1  0
  5 27  1  0
  6 28  1  0
  6 29  1  0
 11 30  1  0
 11 31  1  0
 12 32  1  0
 12 33  1  0
 13 34  1  0
 13 35  1  0
 14 36  1  0
 14 37  1  0
 15 38  1  0
 15 39  1  0
 16 40  1  0
 16 41  1  0
 17 42  1  0
 17 43  1  0
 18 44  1  0
 18 45  1  0
 19 46  1  0
M  END


  Mrv1652309032223312D          

 22 21  0  0  0  0            999 V2000
   -3.4322    0.4934    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7177    0.9059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7177    1.7309    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0033    0.4934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2888    0.9059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5743    0.4934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1401    0.9059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8546    1.3184    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5691    1.7309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2836    2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9980    2.5559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7125    2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4270    2.5559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1414    2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8559    2.5559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5704    2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2849    2.5559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9993    2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7138    2.5559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4283    2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.1427    2.5559    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
    9.4283    1.3184    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  2  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  3  0  0  0  0
  8  9  1  0  0  0  0
  9 10  3  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 20 21  1  0  0  0  0
 20 22  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0182741

> <DATABASE_NAME>
NP-MRD

> <SMILES>
OC(=O)CCCC#CC#CCCCCCCCCC=C(Br)Br

> <INCHI_IDENTIFIER>
InChI=1S/C18H24Br2O2/c19-17(20)15-13-11-9-7-5-3-1-2-4-6-8-10-12-14-16-18(21)22/h15H,1-3,5,7,9,11-14,16H2,(H,21,22)

> <INCHI_KEY>
CIBAGAXCIIWJSS-UHFFFAOYSA-N

> <FORMULA>
C18H24Br2O2

> <MOLECULAR_WEIGHT>
432.196

> <EXACT_MASS>
430.014306

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
46

> <JCHEM_AVERAGE_POLARIZABILITY>
41.568940615687126

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
18,18-dibromooctadec-17-en-5,7-diynoic acid

> <JCHEM_LOGP>
7.065579409666666

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.7576289066042907

> <JCHEM_POLAR_SURFACE_AREA>
37.3

> <JCHEM_REFRACTIVITY>
110.64990000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
14

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
18,18-dibromooctadec-17-en-5,7-diynoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 03-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   03-SEP-22         0                                  
HETATM    1  O   UNK     0      -6.407   0.921   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0      -5.073   1.691   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0      -5.073   3.231   0.000  0.00  0.00           O+0
HETATM    4  C   UNK     0      -3.739   0.921   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -2.406   1.691   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.072   0.921   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.262   1.691   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.595   2.461   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       2.929   3.231   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.263   4.001   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       5.596   4.771   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       6.930   4.001   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       8.264   4.771   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       9.597   4.001   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      10.931   4.771   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      12.265   4.001   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      13.598   4.771   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      14.932   4.001   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      16.266   4.771   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      17.599   4.001   0.000  0.00  0.00           C+0
HETATM   21 Br   UNK     0      18.933   4.771   0.000  0.00  0.00          Br+0
HETATM   22 Br   UNK     0      17.599   2.461   0.000  0.00  0.00          Br+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20                                                            
MASTER        0    0    0    0    0    0    0    0   22    0   42    0
END

View in JSmol

Synonyms

Value	Source
18,18-Dibromooctadec-17-en-5,7-diynoate	Generator

Chemical Formula

C₁₈H₂₄Br₂O₂

Average Mass

432.1960 Da

Monoisotopic Mass

430.01431 Da

IUPAC Name

18,18-dibromooctadec-17-en-5,7-diynoic acid

Traditional Name

18,18-dibromooctadec-17-en-5,7-diynoic acid

CAS Registry Number

Not Available

SMILES

OC(=O)CCCC#CC#CCCCCCCCCC=C(Br)Br

InChI Identifier

InChI=1S/C18H24Br2O2/c19-17(20)15-13-11-9-7-5-3-1-2-4-6-8-10-12-14-16-18(21)22/h15H,1-3,5,7,9,11-14,16H2,(H,21,22)

InChI Key

CIBAGAXCIIWJSS-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Leptogium saturninum	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as long-chain fatty acids. These are fatty acids with an aliphatic tail that contains between 13 and 21 carbon atoms.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty acids and conjugates

Direct Parent

Long-chain fatty acids

Alternative Parents

Substituents

Long-chain fatty acid
Halogenated fatty acid
Straight chain fatty acid
Unsaturated fatty acid
Ketene acetal or derivatives
Carboxylic acid derivative
Carboxylic acid
Monocarboxylic acid or derivatives
Bromoalkene
Haloalkene
Vinyl bromide
Vinyl halide
Organohalogen compound
Organobromide
Organooxygen compound
Carbonyl group
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	7.07	ChemAxon
pKa (Strongest Acidic)	3.76	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	37.3 Å²	ChemAxon
Rotatable Bond Count	14	ChemAxon
Refractivity	110.65 m³·mol⁻¹	ChemAxon
Polarizability	41.57 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78435136

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

129861907

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 18,18-dibromooctadec-17-en-5,7-diynoic acid (NP0182741)

MOL for NP0182741 (18,18-dibromooctadec-17-en-5,7-diynoic acid)

3D MOL for NP0182741 (18,18-dibromooctadec-17-en-5,7-diynoic acid)

3D SDF for NP0182741 (18,18-dibromooctadec-17-en-5,7-diynoic acid)

3D-SDF for NP0182741 (18,18-dibromooctadec-17-en-5,7-diynoic acid)

PDB for NP0182741 (18,18-dibromooctadec-17-en-5,7-diynoic acid)

3D PDB for NP0182741 (18,18-dibromooctadec-17-en-5,7-diynoic acid)

SMILES for NP0182741 (18,18-dibromooctadec-17-en-5,7-diynoic acid)

INCHI for NP0182741 (18,18-dibromooctadec-17-en-5,7-diynoic acid)

Structure for NP0182741 (18,18-dibromooctadec-17-en-5,7-diynoic acid)

3D Structure for NP0182741 (18,18-dibromooctadec-17-en-5,7-diynoic acid)