NP-MRD: Showing NP-Card for (4s)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one (NP0182572)

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Record Information

Version

2.0

Created at

2022-09-03 21:17:58 UTC

Updated at

2022-09-03 21:17:59 UTC

NP-MRD ID

NP0182572

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(4s)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one

Description

(4S)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]Heptan-6-one belongs to the class of organic compounds known as phenylmorpholines. These are aromatic compounds containing a morpholine ring and a benzene ring linked to each other through a CC or a CN bond. (4s)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one is found in Clausena lansium. Based on a literature review very few articles have been published on (4S)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]Heptan-6-one.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 38 41  0  0  0  0  0  0  0  0999 V2000
   -1.6440    2.7674    0.3069 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7177    1.7584    0.7956 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4572    1.4385    2.1648 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8438    2.0084    3.1941 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4223    0.2112    2.0528 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4116   -0.7463    1.4614 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4113   -0.4955    0.0919 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.7744   -0.6712   -0.4574 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8871   -0.2293    0.2068 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1636   -0.3986   -0.3315 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3135   -1.0189   -1.5488 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2028   -1.4700   -2.2307 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9465   -1.3042   -1.7026 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1167    0.8883   -0.0321 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.3080    0.7468    0.9562 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3838   -0.0751    0.4935 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4175    0.5685   -0.2018 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5046   -0.1279   -0.6733 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6318   -1.4800   -0.4881 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6339   -2.1414    0.1910 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5472   -1.4303    0.6598 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6635    2.6143    0.7291 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2994    3.7446    0.7545 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6385    2.8120   -0.7939 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8962   -0.0718    2.9606 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3110   -1.1791   -0.4323 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8057    0.2558    1.1645 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0233   -0.0380    0.2181 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2859   -1.1734   -2.0081 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3075   -1.9631   -3.1957 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0404   -1.6464   -2.2092 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3894    1.2603   -0.9805 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5774    1.7991    1.1906 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3779    1.6312   -0.3809 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3203    0.3591   -1.2180 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5103   -2.0229   -0.8731 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7110   -3.2165    0.3516 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7785   -1.9639    1.2022 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2 14  1  0
 14  7  1  0
  7  6  1  0
  6  5  1  0
  5 15  1  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  2  0
 19 20  1  0
 20 21  2  0
  5  3  1  0
  3  4  2  0
  7  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  2  0
  3  2  1  0
 13  8  1  0
 15 14  1  0
 21 16  1  0
  1 22  1  0
  1 23  1  0
  1 24  1  0
 14 32  1  6
  7 26  1  6
  5 25  1  1
 15 33  1  1
 17 34  1  0
 18 35  1  0
 19 36  1  0
 20 37  1  0
 21 38  1  0
  9 27  1  0
 10 28  1  0
 11 29  1  0
 12 30  1  0
 13 31  1  0
M  END


  Mrv1652309032223182D          

 21 24  0  0  1  0            999 V2000
   -0.4149    1.3282    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1635    0.5418    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.1635   -0.2832    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3564   -1.0858    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8780   -0.6957    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5925   -0.2832    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5925    0.5418    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3069    0.9543    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3069    1.7793    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0214    2.1918    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7359    1.7793    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7359    0.9543    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0214    0.5418    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8780    0.9543    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.6717    0.1293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1533    0.1293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5658   -0.5852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3908   -0.5852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8033    0.1293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3908    0.8437    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5658    0.8437    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
  8 13  1  0  0  0  0
  7 14  1  0  0  0  0
 14  2  1  6  0  0  0
 14 15  1  0  0  0  0
  5 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 16 21  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0182572

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CN1[C@@H]2C(OC(C2C2=CC=CC=C2)C1=O)C1=CC=CC=C1

> <INCHI_IDENTIFIER>
InChI=1S/C18H17NO2/c1-19-15-14(12-8-4-2-5-9-12)17(18(19)20)21-16(15)13-10-6-3-7-11-13/h2-11,14-17H,1H3/t14?,15-,16?,17?/m0/s1

> <INCHI_KEY>
QVGJMLNUOQHRAS-YSURMTKTSA-N

> <FORMULA>
C18H17NO2

> <MOLECULAR_WEIGHT>
279.339

> <EXACT_MASS>
279.125928791

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
38

> <JCHEM_AVERAGE_POLARIZABILITY>
30.064697872567145

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(4S)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one

> <JCHEM_LOGP>
2.6289431903333336

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
17.83370397344749

> <JCHEM_PKA_STRONGEST_BASIC>
-4.275230498865136

> <JCHEM_POLAR_SURFACE_AREA>
29.540000000000003

> <JCHEM_REFRACTIVITY>
79.84980000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(4S)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one

> <JCHEM_VEBER_RULE>
1

$$$$

HEADER    PROTEIN                                 03-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   03-SEP-22         0                                  
HETATM    1  C   UNK     0      -0.774   2.479   0.000  0.00  0.00           C+0
HETATM    2  N   UNK     0       0.305   1.011   0.000  0.00  0.00           N+0
HETATM    3  C   UNK     0       0.305  -0.529   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      -0.665  -2.027   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       1.639  -1.299   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       2.973  -0.529   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       2.973   1.011   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       4.306   1.781   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       4.306   3.321   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       5.640   4.091   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       6.974   3.321   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       6.974   1.781   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       5.640   1.011   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       1.639   1.781   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       1.254   0.241   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -0.286   0.241   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -1.056  -1.092   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -2.596  -1.092   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -3.366   0.241   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -2.596   1.575   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -1.056   1.575   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   14                                                  
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6   15                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8   14                                                  
CONECT    8    7    9   13                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12    8                                                       
CONECT   14    7    2   15                                                  
CONECT   15   14    5   16                                                  
CONECT   16   15   17   21                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   16                                                       
MASTER        0    0    0    0    0    0    0    0   21    0   48    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₈H₁₇NO₂

Average Mass

279.3390 Da

Monoisotopic Mass

279.12593 Da

IUPAC Name

(4S)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one

Traditional Name

(4S)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one

CAS Registry Number

Not Available

SMILES

CN1[C@@H]2C(OC(C2C2=CC=CC=C2)C1=O)C1=CC=CC=C1

InChI Identifier

InChI=1S/C18H17NO2/c1-19-15-14(12-8-4-2-5-9-12)17(18(19)20)21-16(15)13-10-6-3-7-11-13/h2-11,14-17H,1H3/t14?,15-,16?,17?/m0/s1

InChI Key

QVGJMLNUOQHRAS-YSURMTKTSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Clausena lansium	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as phenylmorpholines. These are aromatic compounds containing a morpholine ring and a benzene ring linked to each other through a CC or a CN bond.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Oxazinanes

Sub Class

Morpholines

Direct Parent

Phenylmorpholines

Alternative Parents

Substituents

Phenylmorpholine
3-phenylpyrrolidine
Monocyclic benzene moiety
Pyrrolidone
2-pyrrolidone
N-alkylpyrrolidine
Benzenoid
Oxolane
Pyrrole
Pyrrolidine
Tertiary carboxylic acid amide
Lactam
Carboxamide group
Ether
Dialkyl ether
Carboxylic acid derivative
Oxacycle
Azacycle
Carbonyl group
Organic nitrogen compound
Organic oxide
Organic oxygen compound
Organooxygen compound
Organonitrogen compound
Hydrocarbon derivative
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.63	ChemAxon
pKa (Strongest Acidic)	17.83	ChemAxon
pKa (Strongest Basic)	-4.3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	29.54 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	79.85 m³·mol⁻¹	ChemAxon
Polarizability	30.06 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

4475340

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

5316244

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (4s)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one (NP0182572)

MOL for NP0182572 ((4s)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one)

3D MOL for NP0182572 ((4s)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one)

3D SDF for NP0182572 ((4s)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one)

3D-SDF for NP0182572 ((4s)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one)

PDB for NP0182572 ((4s)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one)

3D PDB for NP0182572 ((4s)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one)

SMILES for NP0182572 ((4s)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one)

INCHI for NP0182572 ((4s)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one)

Structure for NP0182572 ((4s)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one)

3D Structure for NP0182572 ((4s)-5-methyl-3,7-diphenyl-2-oxa-5-azabicyclo[2.2.1]heptan-6-one)