Np mrd loader

Record Information
Version2.0
Created at2022-09-03 20:22:08 UTC
Updated at2022-09-03 20:22:09 UTC
NP-MRD IDNP0181787
Secondary Accession NumbersNone
Natural Product Identification
Common Name(1s,5s,7e,9s,11e,13r,14s,16r,17s,18r,19s)-5,21-dihydroxy-19-(1h-indol-3-ylmethyl)-7,9,16,17-tetramethyl-15-oxa-20-azatetracyclo[11.8.0.0¹,¹⁸.0¹⁴,¹⁶]henicosa-7,11,20-triene-2,6-dione
DescriptionChaetoglobosin F, also known as penochalasin K, belongs to the class of organic compounds known as chaetoglobosins. These are cytochalasans with a structure in which the hydrogenated isoindole bears an (indol-3-yl)methyl group. Chaetoglobosin F is a secondary metabolite. Secondary metabolites are metabolically or physiologically non-essential metabolites that may serve a role as defense or signalling molecules. In some cases they are simply molecules that arise from the incomplete metabolism of other secondary metabolites. (1s,5s,7e,9s,11e,13r,14s,16r,17s,18r,19s)-5,21-dihydroxy-19-(1h-indol-3-ylmethyl)-7,9,16,17-tetramethyl-15-oxa-20-azatetracyclo[11.8.0.0¹,¹⁸.0¹⁴,¹⁶]henicosa-7,11,20-triene-2,6-dione is found in Chaetomium subaffine. (1s,5s,7e,9s,11e,13r,14s,16r,17s,18r,19s)-5,21-dihydroxy-19-(1h-indol-3-ylmethyl)-7,9,16,17-tetramethyl-15-oxa-20-azatetracyclo[11.8.0.0¹,¹⁸.0¹⁴,¹⁶]henicosa-7,11,20-triene-2,6-dione was first documented in 2010 (PMID: 20225834). Based on a literature review a small amount of articles have been published on chaetoglobosin F (PMID: 24689437) (PMID: 27141677) (PMID: 24708412) (PMID: 22739238).
Structure
Thumb
Synonyms
ValueSource
Chaetoglobosin DMeSH
Chaetoglobosin TMeSH
Chaetoglobosin VMeSH
Chaetoglobosin yMeSH
ChaetoglobosinsMeSH
Chaetoglobosin aMeSH
Chaetoglobosin bMeSH
Chaetoglobosin QMeSH
Chaetoglobosin RMeSH
Chaetoglobosin WMeSH
Chaetoglobosin eMeSH
Chaetoglobosin KMeSH
Chaetoglobosin uMeSH
Chaetoglobosin CMeSH
Penochalasin KMeSH
Chemical FormulaC32H38N2O5
Average Mass530.6650 Da
Monoisotopic Mass530.27807 Da
IUPAC Name(1S,5S,7E,9S,11E,13R,14S,16R,17S,18R,19S)-5,21-dihydroxy-19-[(1H-indol-3-yl)methyl]-7,9,16,17-tetramethyl-15-oxa-20-azatetracyclo[11.8.0.0^{1,18}.0^{14,16}]henicosa-7,11,20-triene-2,6-dione
Traditional Name(1S,5S,7E,9S,11E,13R,14S,16R,17S,18R,19S)-5,21-dihydroxy-19-(1H-indol-3-ylmethyl)-7,9,16,17-tetramethyl-15-oxa-20-azatetracyclo[11.8.0.0^{1,18}.0^{14,16}]henicosa-7,11,20-triene-2,6-dione
CAS Registry NumberNot Available
SMILES
C[C@H]1[C@H]2[C@H](CC3=CNC4=CC=CC=C34)N=C(O)[C@@]22[C@@H](\C=C\C[C@H](C)\C=C(C)\C(=O)[C@@H](O)CCC2=O)[C@@H]2O[C@]12C
InChI Identifier
InChI=1S/C32H38N2O5/c1-17-8-7-10-22-29-31(4,39-29)19(3)27-24(15-20-16-33-23-11-6-5-9-21(20)23)34-30(38)32(22,27)26(36)13-12-25(35)28(37)18(2)14-17/h5-7,9-11,14,16-17,19,22,24-25,27,29,33,35H,8,12-13,15H2,1-4H3,(H,34,38)/b10-7+,18-14+/t17-,19-,22-,24-,25-,27-,29-,31+,32+/m0/s1
InChI KeyKTFGDHPTDQFFRL-USMZZGTESA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Chaetomium subaffineLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as chaetoglobosins. These are cytochalasans with a structure in which the hydrogenated isoindole bears an (indol-3-yl)methyl group.
KingdomOrganic compounds
Super ClassAlkaloids and derivatives
ClassCytochalasans
Sub ClassChaetoglobosins
Direct ParentChaetoglobosins
Alternative Parents
Substituents
  • Chaetoglobosin skeleton
  • Macrolactam
  • Isoindolone
  • 3-alkylindole
  • Indole
  • Indole or derivatives
  • Isoindoline
  • Isoindole or derivatives
  • Oxepane
  • Benzenoid
  • Substituted pyrrole
  • Pyrrolidone
  • 2-pyrrolidone
  • Heteroaromatic compound
  • Pyrrole
  • Pyrrolidine
  • Carboxamide group
  • Cyclic ketone
  • Ketone
  • Lactam
  • Secondary carboxylic acid amide
  • Secondary alcohol
  • Oxacycle
  • Organoheterocyclic compound
  • Carboxylic acid derivative
  • Azacycle
  • Dialkyl ether
  • Oxirane
  • Ether
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organonitrogen compound
  • Organooxygen compound
  • Alcohol
  • Carbonyl group
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.01ChemAxon
pKa (Strongest Acidic)2.8ChemAxon
pKa (Strongest Basic)5.46ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area115.28 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity150.5 m³·mol⁻¹ChemAxon
Polarizability57.94 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00011312
Chemspider ID10406723
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound23259927
PDB IDNot Available
ChEBI ID68732
Good Scents IDNot Available
References
General References
  1. Cui CM, Li XM, Li CS, Proksch P, Wang BG: Cytoglobosins A-G, cytochalasans from a marine-derived endophytic fungus, Chaetomium globosum QEN-14. J Nat Prod. 2010 Apr 23;73(4):729-33. doi: 10.1021/np900569t. [PubMed:20225834 ]
  2. Xiao J, Zhang Q, Gao YQ, Tang JJ, Zhang AL, Gao JM: Secondary metabolites from the endophytic Botryosphaeria dothidea of Melia azedarach and their antifungal, antibacterial, antioxidant, and cytotoxic activities. J Agric Food Chem. 2014 Apr 23;62(16):3584-90. doi: 10.1021/jf500054f. Epub 2014 Apr 9. [PubMed:24689437 ]
  3. Shen L, Zhu L, Wei ZQ, Li XW, Li M, Song YC: [Chemical constituents from endophyte Chaetomium globosum in Imperata cylindrical]. Zhongguo Zhong Yao Za Zhi. 2015 Dec;40(23):4645-9. [PubMed:27141677 ]
  4. Li H, Xiao J, Gao YQ, Tang JJ, Zhang AL, Gao JM: Chaetoglobosins from Chaetomium globosum, an endophytic fungus in Ginkgo biloba, and their phytotoxic and cytotoxic activities. J Agric Food Chem. 2014 Apr 30;62(17):3734-41. doi: 10.1021/jf500390h. Epub 2014 Apr 15. [PubMed:24708412 ]
  5. Hua C, Yang Y, Sun L, Dou H, Tan R, Hou Y: Chaetoglobosin F, a small molecule compound, possesses immunomodulatory properties on bone marrow-derived dendritic cells via TLR9 signaling pathway. Immunobiology. 2013 Mar;218(3):292-302. doi: 10.1016/j.imbio.2012.05.015. Epub 2012 May 23. [PubMed:22739238 ]
  6. LOTUS database [Link]