NP-MRD: Showing NP-Card for 3-[(2r)-6-hydroxy-5-[(3e)-4-methyl-6-(2,6,6-trimethylcyclohex-1-en-1-yl)hex-3-en-1-yl]-3,6-dihydro-2h-pyran-2-yl]-5-oxo-2h-furan-2-yl acetate (NP0178363)

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Record Information

Version

2.0

Created at

2022-09-03 16:20:16 UTC

Updated at

2022-09-03 16:20:16 UTC

NP-MRD ID

NP0178363

Secondary Accession Numbers

None

Natural Product Identification

Common Name

3-[(2r)-6-hydroxy-5-[(3e)-4-methyl-6-(2,6,6-trimethylcyclohex-1-en-1-yl)hex-3-en-1-yl]-3,6-dihydro-2h-pyran-2-yl]-5-oxo-2h-furan-2-yl acetate

Description

Manoalide 25-acetate belongs to the class of organic compounds known as diterpene lactones. These are diterpenoids containing a lactone moiety. 3-[(2r)-6-hydroxy-5-[(3e)-4-methyl-6-(2,6,6-trimethylcyclohex-1-en-1-yl)hex-3-en-1-yl]-3,6-dihydro-2h-pyran-2-yl]-5-oxo-2h-furan-2-yl acetate was first documented in 2004 (PMID: 15497961). Based on a literature review very few articles have been published on Manoalide 25-acetate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309032218202D          

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M  END

     RDKit          3D

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M  END


  Mrv1652309032218202D          

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M  END
> <DATABASE_ID>
NP0178363

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(=O)OC1OC(=O)C=C1[C@H]1CC=C(CC\C=C(/C)CCC2=C(C)CCCC2(C)C)C(O)O1

> <INCHI_IDENTIFIER>
InChI=1S/C27H38O6/c1-17(11-13-22-18(2)9-7-15-27(22,4)5)8-6-10-20-12-14-23(32-25(20)30)21-16-24(29)33-26(21)31-19(3)28/h8,12,16,23,25-26,30H,6-7,9-11,13-15H2,1-5H3/b17-8+/t23-,25?,26?/m1/s1

> <INCHI_KEY>
IBDCHSSSHBQBDQ-HOCAOTRVSA-N

> <FORMULA>
C27H38O6

> <MOLECULAR_WEIGHT>
458.595

> <EXACT_MASS>
458.266838944

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
71

> <JCHEM_AVERAGE_POLARIZABILITY>
52.65199600348241

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
3-[(2R)-6-hydroxy-5-[(3E)-4-methyl-6-(2,6,6-trimethylcyclohex-1-en-1-yl)hex-3-en-1-yl]-3,6-dihydro-2H-pyran-2-yl]-5-oxo-2,5-dihydrofuran-2-yl acetate

> <JCHEM_LOGP>
5.377757476333333

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
11.841402053530727

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.7695762081970754

> <JCHEM_PKA_STRONGEST_BASIC>
-4.1813791836745215

> <JCHEM_POLAR_SURFACE_AREA>
82.06

> <JCHEM_REFRACTIVITY>
128.6341

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
3-[(2R)-6-hydroxy-5-[(3E)-4-methyl-6-(2,6,6-trimethylcyclohex-1-en-1-yl)hex-3-en-1-yl]-3,6-dihydro-2H-pyran-2-yl]-5-oxo-2H-furan-2-yl acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 03-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   03-SEP-22         0                                  
HETATM    1  C   UNK     0       1.334 -10.010   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.334 -11.550   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       2.667 -12.320   0.000  0.00  0.00           O+0
HETATM    4  O   UNK     0       0.000 -12.320   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       0.000 -13.860   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       1.246 -14.765   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       0.770 -16.230   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       1.675 -17.476   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0      -0.770 -16.230   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -1.246 -14.765   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -2.711 -14.289   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -3.855 -15.320   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      -5.320 -14.844   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -5.640 -13.338   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -7.104 -12.862   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -7.425 -11.355   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -8.889 -10.879   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -9.209  -9.373   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -8.065  -8.343   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0     -10.674  -8.897   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0     -11.818  -9.928   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0     -13.283  -9.452   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0     -14.428 -10.482   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0     -14.107 -11.989   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0     -15.892 -10.006   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0     -16.212  -8.500   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0     -15.068  -7.470   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0     -13.603  -7.945   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0     -13.077  -6.498   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0     -12.109  -7.573   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      -4.495 -12.307   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0      -4.816 -10.801   0.000  0.00  0.00           O+0
HETATM   33  O   UNK     0      -3.031 -12.783   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6   10                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10                                                       
CONECT   10    9    5   11                                                  
CONECT   11   10   12   33                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15   31                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23   28                                                  
CONECT   23   22   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   22   29   30                                             
CONECT   29   28                                                            
CONECT   30   28                                                            
CONECT   31   14   32   33                                                  
CONECT   32   31                                                            
CONECT   33   31   11                                                       
MASTER        0    0    0    0    0    0    0    0   33    0   70    0
END

View in JSmol

Synonyms

Value	Source
Manoalide 25-acetic acid	Generator

Chemical Formula

C₂₇H₃₈O₆

Average Mass

458.5950 Da

Monoisotopic Mass

458.26684 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

CC(=O)OC1OC(=O)C=C1[C@H]1CC=C(CC\C=C(/C)CCC2=C(C)CCCC2(C)C)C(O)O1

InChI Identifier

InChI=1S/C27H38O6/c1-17(11-13-22-18(2)9-7-15-27(22,4)5)8-6-10-20-12-14-23(32-25(20)30)21-16-24(29)33-26(21)31-19(3)28/h8,12,16,23,25-26,30H,6-7,9-11,13-15H2,1-5H3/b17-8+/t23-,25?,26?/m1/s1

InChI Key

IBDCHSSSHBQBDQ-HOCAOTRVSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as diterpene lactones. These are diterpenoids containing a lactone moiety.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Terpene lactones

Direct Parent

Diterpene lactones

Alternative Parents

Substituents

Diterpenoid
Diterpene lactone
Acylal
Pyran
Dicarboxylic acid or derivatives
2-furanone
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Dihydrofuran
Lactone
Hemiacetal
Carboxylic acid ester
Oxacycle
Organoheterocyclic compound
Carboxylic acid derivative
Acetal
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00043694

Chemspider ID

9560508

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

11385595

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Wonganuchitmeta SN, Yuenyongsawad S, Keawpradub N, Plubrukarn A: Antitubercular sesterterpenes from the Thai sponge Brachiaster sp. J Nat Prod. 2004 Oct;67(10):1767-70. doi: 10.1021/np0498354. [PubMed:15497961 ]
LOTUS database [Link]

Showing NP-Card for 3-[(2r)-6-hydroxy-5-[(3e)-4-methyl-6-(2,6,6-trimethylcyclohex-1-en-1-yl)hex-3-en-1-yl]-3,6-dihydro-2h-pyran-2-yl]-5-oxo-2h-furan-2-yl acetate (NP0178363)

MOL for NP0178363 (3-[(2r)-6-hydroxy-5-[(3e)-4-methyl-6-(2,6,6-trimethylcyclohex-1-en-1-yl)hex-3-en-1-yl]-3,6-dihydro-2h-pyran-2-yl]-5-oxo-2h-furan-2-yl acetate)

3D MOL for NP0178363 (3-[(2r)-6-hydroxy-5-[(3e)-4-methyl-6-(2,6,6-trimethylcyclohex-1-en-1-yl)hex-3-en-1-yl]-3,6-dihydro-2h-pyran-2-yl]-5-oxo-2h-furan-2-yl acetate)

3D SDF for NP0178363 (3-[(2r)-6-hydroxy-5-[(3e)-4-methyl-6-(2,6,6-trimethylcyclohex-1-en-1-yl)hex-3-en-1-yl]-3,6-dihydro-2h-pyran-2-yl]-5-oxo-2h-furan-2-yl acetate)

3D-SDF for NP0178363 (3-[(2r)-6-hydroxy-5-[(3e)-4-methyl-6-(2,6,6-trimethylcyclohex-1-en-1-yl)hex-3-en-1-yl]-3,6-dihydro-2h-pyran-2-yl]-5-oxo-2h-furan-2-yl acetate)

PDB for NP0178363 (3-[(2r)-6-hydroxy-5-[(3e)-4-methyl-6-(2,6,6-trimethylcyclohex-1-en-1-yl)hex-3-en-1-yl]-3,6-dihydro-2h-pyran-2-yl]-5-oxo-2h-furan-2-yl acetate)

3D PDB for NP0178363 (3-[(2r)-6-hydroxy-5-[(3e)-4-methyl-6-(2,6,6-trimethylcyclohex-1-en-1-yl)hex-3-en-1-yl]-3,6-dihydro-2h-pyran-2-yl]-5-oxo-2h-furan-2-yl acetate)

SMILES for NP0178363 (3-[(2r)-6-hydroxy-5-[(3e)-4-methyl-6-(2,6,6-trimethylcyclohex-1-en-1-yl)hex-3-en-1-yl]-3,6-dihydro-2h-pyran-2-yl]-5-oxo-2h-furan-2-yl acetate)

INCHI for NP0178363 (3-[(2r)-6-hydroxy-5-[(3e)-4-methyl-6-(2,6,6-trimethylcyclohex-1-en-1-yl)hex-3-en-1-yl]-3,6-dihydro-2h-pyran-2-yl]-5-oxo-2h-furan-2-yl acetate)

Structure for NP0178363 (3-[(2r)-6-hydroxy-5-[(3e)-4-methyl-6-(2,6,6-trimethylcyclohex-1-en-1-yl)hex-3-en-1-yl]-3,6-dihydro-2h-pyran-2-yl]-5-oxo-2h-furan-2-yl acetate)

3D Structure for NP0178363 (3-[(2r)-6-hydroxy-5-[(3e)-4-methyl-6-(2,6,6-trimethylcyclohex-1-en-1-yl)hex-3-en-1-yl]-3,6-dihydro-2h-pyran-2-yl]-5-oxo-2h-furan-2-yl acetate)