NP-MRD: Showing NP-Card for 5-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol (NP0175467)

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Record Information

Version

2.0

Created at

2022-09-03 12:56:30 UTC

Updated at

2022-09-03 12:56:30 UTC

NP-MRD ID

NP0175467

Secondary Accession Numbers

None

Natural Product Identification

Common Name

5-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol

Description

5-{[3,4-Dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]Tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. 5-{[3,4-Dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]Tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004171513212D          

 54 61  0  0  0  0            999 V2000
   -1.3530   -0.1808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5512    0.0133    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0178   -0.5840    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8197   -0.3900    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0460    0.4124    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8402    0.6271    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5055    1.3811    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5341    1.0733    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3901    0.0067    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2098    0.1116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7017    0.8273    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5283    0.7660    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8686    0.0141    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6866   -0.0930    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3703    0.6689    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1884    0.5619    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0064    0.4548    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3227   -0.3072    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1407   -0.4142    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.6424    0.2407    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3261    1.0026    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.8279    1.6575    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5116    2.4195    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6936    2.5266    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.6459    1.5505    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.1476    2.2053    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.9622    0.7885    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7802    0.6814    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.4604    0.1336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.7767   -0.6284    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.2750   -1.2833    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4503   -1.2623    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.1755   -2.0402    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3846   -2.2751    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1926   -3.0774    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.8303   -2.5419    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8094   -3.3666    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.5099   -2.0741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2878   -2.3489    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.8209   -0.9621    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5530   -1.3424    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5734   -1.7491    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0029   -0.8550    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5012   -1.5099    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6831   -1.4028    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3669   -0.6408    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9300   -1.3407    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4622   -0.6964    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5823   -1.5211    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7330   -1.7690    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1873   -0.8595    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6312   -1.2182    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3854   -0.9973    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3184    0.8048    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  6  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 22 25  1  0  0  0  0
 25 26  1  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  0  0  0  0
 27 29  1  0  0  0  0
 20 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 33 36  1  0  0  0  0
 36 37  1  0  0  0  0
 36 38  1  0  0  0  0
 31 38  1  0  0  0  0
 38 39  1  0  0  0  0
 18 40  1  0  0  0  0
 40 41  1  0  0  0  0
 40 42  1  0  0  0  0
 40 43  1  0  0  0  0
 14 43  1  0  0  0  0
 43 44  1  0  0  0  0
 44 45  1  0  0  0  0
 45 46  1  0  0  0  0
 13 46  1  0  0  0  0
 46 47  1  0  0  0  0
 46 48  1  0  0  0  0
 10 48  1  0  0  0  0
 48 49  1  0  0  0  0
 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
  9 51  1  0  0  0  0
 51 52  1  0  0  0  0
 48 52  1  0  0  0  0
 51 53  1  0  0  0  0
  4 53  1  0  0  0  0
  2 54  1  0  0  0  0
M  END

     RDKit          3D

120127  0  0  0  0  0  0  0  0999 V2000
    8.7067   -2.1173    3.5725 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2361   -2.2366    3.7221 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7213   -2.2051    5.1323 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4245   -2.3604    2.6864 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9955   -2.3806    1.3251 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.6001   -1.0511    1.0283 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7411   -0.2204    0.1060 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.9748    1.2643    0.3724 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1483   -0.4659   -1.1949 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2671   -0.5201    0.3230 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.4583    0.1068   -0.7820 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.7236    1.3437   -0.4705 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8765    1.7106   -1.6464 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9625    0.6576   -2.1791 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.5329    0.8034   -1.7399 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.0680    1.9043   -2.5937 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3479    1.2686   -0.3225 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0647    1.2673    0.1020 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1110    0.7625   -0.8220 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.2623    0.3939   -0.0740 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3502    1.1819   -0.3309 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.4118    0.5011   -0.9319 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4547    1.3430   -1.2074 C   0  0  2  0  0  0  0  0  0  0  0  0
   -6.7276    1.2375   -2.7163 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0608   -0.0710   -3.0653 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2308    2.7883   -0.9254 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.5672    3.4519   -1.9845 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6383    3.1093    0.4057 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.6860    4.1350    0.2323 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8829    1.9016    0.9105 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.8050    1.0902    1.5698 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5023    0.8299    2.8822 C   0  0  1  0  0  0  0  0  0  0  0  0
   -6.5092    1.2153    3.7515 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3319    0.1547    3.9774 C   0  0  1  0  0  0  0  0  0  0  0  0
   -8.7454    0.3763    3.4294 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.6483    0.5773    2.0635 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -5.3481   -0.6670    3.0344 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.4507   -0.9481    4.0568 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7164   -0.3463   -1.7350 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4273   -0.3620   -3.0620 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2012   -1.6417   -1.0332 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2368   -0.4943   -1.8110 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2623   -1.2843   -2.9581 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6245   -1.8198   -2.4851 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5692   -0.7120   -2.1671 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5520   -0.7508   -3.3759 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4323   -0.9976   -1.0314 C   0  0  2  0  0  0  0  0  0  0  0  0
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    3.8570   -2.3088    0.8548 O   0  0  0  0  0  0  0  0  0  0  0  0
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    6.8540    1.7810   -0.5954 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.9613   -1.0282   -1.2288 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0195   -0.1482    1.3244 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1320    0.2765   -1.6245 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4986    2.1683   -0.3904 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2244    1.3719    0.5095 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2792    2.6430   -1.4779 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6148    2.0320   -2.4461 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9026    0.9015   -3.2995 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7308    2.4239   -3.1976 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8880    1.5593   -3.2248 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.5685    1.3277    3.1709 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1533004171513212D          

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M  END
> <DATABASE_ID>
NP0175467

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(C)=CC1CC(C)(O)C2C3CCC4C5(C)CCC(OC6OC(CO)C(O)C(O)C6OC6OC(CO)C(O)C6O)C(C)(C)C5CCC4(C)C33COC2(C3)O1

> <INCHI_IDENTIFIER>
InChI=1S/C41H66O13/c1-20(2)14-21-15-39(7,48)33-22-8-9-26-37(5)12-11-27(36(3,4)25(37)10-13-38(26,6)40(22)18-41(33,54-21)49-19-40)52-35-32(30(46)28(44)23(16-42)51-35)53-34-31(47)29(45)24(17-43)50-34/h14,21-35,42-48H,8-13,15-19H2,1-7H3

> <INCHI_KEY>
LIICXWIEFNOEDE-UHFFFAOYSA-N

> <FORMULA>
C41H66O13

> <MOLECULAR_WEIGHT>
766.966

> <EXACT_MASS>
766.450342185

> <JCHEM_ACCEPTOR_COUNT>
13

> <JCHEM_ATOM_COUNT>
120

> <JCHEM_AVERAGE_POLARIZABILITY>
85.9089826912342

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
7

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
5-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol

> <ALOGPS_LOGP>
1.80

> <JCHEM_LOGP>
2.0100215509999995

> <ALOGPS_LOGS>
-3.93

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
8

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.798192789010304

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.137321024510168

> <JCHEM_PKA_STRONGEST_BASIC>
-2.98108376939566

> <JCHEM_POLAR_SURFACE_AREA>
196.98999999999998

> <JCHEM_REFRACTIVITY>
193.67550000000008

> <JCHEM_ROTATABLE_BOND_COUNT>
7

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
8.99e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
5-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 17-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   17-APR-15         0                                  
HETATM    1  C   UNK     0      -2.526  -0.337   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.029   0.025   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       0.033  -1.090   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.530  -0.728   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.953   0.770   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       3.435   1.171   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.810   2.578   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       4.730   2.004   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       4.462   0.012   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       5.992   0.208   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       6.910   1.544   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       8.453   1.430   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       9.088   0.026   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      10.615  -0.174   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      10.025   1.249   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      11.552   1.049   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      13.079   0.849   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      13.669  -0.573   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      15.196  -0.773   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0      16.133   0.449   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0      15.542   1.872   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0      16.479   3.094   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      15.888   4.516   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0      14.361   4.716   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0      18.006   2.894   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      18.942   4.117   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      18.596   1.472   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0      20.123   1.272   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0      17.659   0.249   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0      18.250  -1.173   0.000  0.00  0.00           O+0
HETATM   31  C   UNK     0      17.313  -2.395   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0      15.774  -2.356   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0      15.261  -3.808   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      13.785  -4.247   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0      13.426  -5.745   0.000  0.00  0.00           O+0
HETATM   36  C   UNK     0      16.483  -4.745   0.000  0.00  0.00           C+0
HETATM   37  O   UNK     0      16.444  -6.284   0.000  0.00  0.00           O+0
HETATM   38  C   UNK     0      17.752  -3.872   0.000  0.00  0.00           C+0
HETATM   39  O   UNK     0      19.204  -4.385   0.000  0.00  0.00           O+0
HETATM   40  C   UNK     0      12.732  -1.796   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      14.099  -2.506   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0      12.270  -3.265   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0      11.205  -1.596   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0      10.269  -2.818   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0       8.742  -2.619   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0       8.151  -1.196   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0       7.336  -2.503   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0       6.463  -1.300   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0       6.687  -2.839   0.000  0.00  0.00           C+0
HETATM   50  O   UNK     0       5.102  -3.302   0.000  0.00  0.00           O+0
HETATM   51  C   UNK     0       4.083  -1.604   0.000  0.00  0.00           C+0
HETATM   52  C   UNK     0       4.912  -2.274   0.000  0.00  0.00           C+0
HETATM   53  O   UNK     0       2.586  -1.862   0.000  0.00  0.00           O+0
HETATM   54  C   UNK     0      -0.594   1.502   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   54                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5   53                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7    8    9                                             
CONECT    7    6                                                            
CONECT    8    6                                                            
CONECT    9    6   10   51                                                  
CONECT   10    9   11   48                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   46                                                  
CONECT   14   13   15   16   43                                             
CONECT   15   14                                                            
CONECT   16   14   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19   40                                                  
CONECT   19   18   20                                                       
CONECT   20   19   21   29                                                  
CONECT   21   20   22                                                       
CONECT   22   21   23   25                                                  
CONECT   23   22   24                                                       
CONECT   24   23                                                            
CONECT   25   22   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28   29                                                  
CONECT   28   27                                                            
CONECT   29   27   20   30                                                  
CONECT   30   29   31                                                       
CONECT   31   30   32   38                                                  
CONECT   32   31   33                                                       
CONECT   33   32   34   36                                                  
CONECT   34   33   35                                                       
CONECT   35   34                                                            
CONECT   36   33   37   38                                                  
CONECT   37   36                                                            
CONECT   38   36   31   39                                                  
CONECT   39   38                                                            
CONECT   40   18   41   42   43                                             
CONECT   41   40                                                            
CONECT   42   40                                                            
CONECT   43   40   14   44                                                  
CONECT   44   43   45                                                       
CONECT   45   44   46                                                       
CONECT   46   45   13   47   48                                             
CONECT   47   46                                                            
CONECT   48   46   10   49   52                                             
CONECT   49   48   50                                                       
CONECT   50   49   51                                                       
CONECT   51   50    9   52   53                                             
CONECT   52   51   48                                                       
CONECT   53   51    4                                                       
CONECT   54    2                                                            
MASTER        0    0    0    0    0    0    0    0   54    0  122    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₄₁H₆₆O₁₃

Average Mass

766.9660 Da

Monoisotopic Mass

766.45034 Da

IUPAC Name

Traditional Name

CAS Registry Number

Not Available

SMILES

CC(C)=CC1CC(C)(O)C2C3CCC4C5(C)CCC(OC6OC(CO)C(O)C(O)C6OC6OC(CO)C(O)C6O)C(C)(C)C5CCC4(C)C33COC2(C3)O1

InChI Identifier

InChI=1S/C41H66O13/c1-20(2)14-21-15-39(7,48)33-22-8-9-26-37(5)12-11-27(36(3,4)25(37)10-13-38(26,6)40(22)18-41(33,54-21)49-19-40)52-35-32(30(46)28(44)23(16-42)51-35)53-34-31(47)29(45)24(17-43)50-34/h14,21-35,42-48H,8-13,15-19H2,1-7H3

InChI Key

LIICXWIEFNOEDE-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Triterpenoids

Direct Parent

Triterpenoids

Alternative Parents

Substituents

Triterpenoid
Steroid
Naphthopyran
Disaccharide
Glycosyl compound
O-glycosyl compound
Naphthalene
Ketal
Pyran
Oxane
Tertiary alcohol
Tetrahydrofuran
Secondary alcohol
Organoheterocyclic compound
Oxacycle
Acetal
Primary alcohol
Organooxygen compound
Hydrocarbon derivative
Organic oxygen compound
Alcohol
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.8	ALOGPS
logP	2.01	ChemAxon
logS	-3.9	ALOGPS
pKa (Strongest Acidic)	12.14	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	13	ChemAxon
Hydrogen Donor Count	7	ChemAxon
Polar Surface Area	196.99 Å²	ChemAxon
Rotatable Bond Count	7	ChemAxon
Refractivity	193.68 m³·mol⁻¹	ChemAxon
Polarizability	85.91 Å³	ChemAxon
Number of Rings	8	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

85324681

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 5-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol (NP0175467)

MOL for NP0175467 (5-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol)

3D MOL for NP0175467 (5-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol)

3D SDF for NP0175467 (5-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol)

3D-SDF for NP0175467 (5-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol)

PDB for NP0175467 (5-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol)

3D PDB for NP0175467 (5-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol)

SMILES for NP0175467 (5-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol)

INCHI for NP0175467 (5-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol)

Structure for NP0175467 (5-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol)

3D Structure for NP0175467 (5-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-6-{[16-hydroxy-2,6,6,10,16-pentamethyl-18-(2-methylprop-1-en-1-yl)-19,21-dioxahexacyclo[18.2.1.0¹,¹⁴.0²,¹¹.0⁵,¹⁰.0¹⁵,²⁰]tricosan-7-yl]oxy}-2-(hydroxymethyl)oxane-3,4-diol)