NP-MRD: Showing NP-Card for (2s)-n-[(1s,2r)-2-(acetyloxy)-1-{methyl[(2s)-3-methyl-1-[(2s)-2-(2-methyl-5-oxo-2h-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2r,4r)-n,2,4-trimethyloctanamido]pentanimidic acid (NP0173503)

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Record Information

Version

2.0

Created at

2022-09-03 10:38:47 UTC

Updated at

2022-09-03 10:38:47 UTC

NP-MRD ID

NP0173503

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2s)-n-[(1s,2r)-2-(acetyloxy)-1-{methyl[(2s)-3-methyl-1-[(2s)-2-(2-methyl-5-oxo-2h-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2r,4r)-n,2,4-trimethyloctanamido]pentanimidic acid

Description

Microcolin B belongs to the class of organic compounds known as hybrid peptides. Hybrid peptides are compounds containing at least two different types of amino acids (alpha, beta, gamma, delta) linked to each other through a peptide bond. (2s)-n-[(1s,2r)-2-(acetyloxy)-1-{methyl[(2s)-3-methyl-1-[(2s)-2-(2-methyl-5-oxo-2h-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2r,4r)-n,2,4-trimethyloctanamido]pentanimidic acid was first documented in 2022 (PMID: 35788180). Based on a literature review very few articles have been published on Microcolin B.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309032212382D          

 52 53  0  0  1  0            999 V2000
   -0.5068  -12.1847    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2728  -12.4548    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8964  -11.9147    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6760  -12.1847    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2996  -11.6446    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.1437  -10.8345    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0792  -11.9147    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7028  -11.3746    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5469  -10.5644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4824  -11.6446    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6383  -12.4548    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1060  -11.1045    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.9501  -10.2944    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8855  -11.3746    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.0415  -12.1847    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8210  -12.4548    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    6.9769  -13.2649    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    7.9124  -10.5644    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
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    6.9769   -9.4843    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.3801   -9.2142    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    9.1597   -9.4843    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2242   -8.4041    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
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    9.6274   -8.1340    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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    7.9449   -6.7038    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   11.0090   -4.6343    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   11.8689   -6.5883    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4446   -8.1340    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    8.6919  -10.8345    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
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    9.6274  -11.9147    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2510  -11.3746    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.7833  -12.7248    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  1  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  1  0  0  0
  8 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 14 12  1  6  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 16 18  1  0  0  0  0
 14 19  1  0  0  0  0
 19 20  1  4  0  0  0
 19 21  2  0  0  0  0
 22 21  1  6  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 23 25  1  0  0  0  0
 25 26  1  0  0  0  0
 27 25  1  1  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
 28 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 30 34  1  0  0  0  0
 34 35  1  1  0  0  0
 35 36  2  0  0  0  0
 35 37  1  0  0  0  0
 37 38  1  0  0  0  0
 38 39  2  0  0  0  0
 38 40  1  0  0  0  0
 40 41  2  0  0  0  0
 41 42  1  0  0  0  0
 37 42  1  0  0  0  0
 42 43  1  0  0  0  0
 27 44  1  0  0  0  0
 44 45  1  0  0  0  0
 44 46  1  0  0  0  0
 22 47  1  0  0  0  0
 47 48  1  1  0  0  0
 47 49  1  0  0  0  0
 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
 50 52  2  0  0  0  0
M  END

     RDKit          3D

117118  0  0  0  0  0  0  0  0999 V2000
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   -0.0620   -2.9286   -0.5532 C   0  0  0  0  0  0  0  0  0  0  0  0
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    2.1595    0.8861   -0.5776 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -5.8783    2.2528   -0.1205 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.3846    3.9904    0.9693 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6432    4.1989   -0.2716 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0376    3.9500    2.0340 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3438    3.2800    2.6459 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8425    3.8614    1.0327 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0989    4.9949    2.1901 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0458    7.0972   -1.2402 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5314    6.4002   -1.6391 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0351    5.6308   -2.2583 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
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 35 37  1  0
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 47111  1  1
 48112  1  0
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 51115  1  0
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 26 87  1  0
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 46110  1  0
 31 91  1  0
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 33 95  1  0
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 34 97  1  6
 42100  1  6
 43101  1  0
 43102  1  0
 43103  1  0
 41 99  1  0
 40 98  1  0
M  END


  Mrv1652309032212382D          

 52 53  0  0  1  0            999 V2000
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    3.0792  -11.9147    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    6.5092  -10.8345    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3533  -10.0244    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.2887  -11.1045    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    7.9124  -10.5644    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.7565   -9.7543    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9769   -9.4843    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.3801   -9.2142    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    9.1597   -9.4843    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2242   -8.4041    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    8.8478   -7.8640    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6274   -8.1340    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.6919   -7.0539    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    7.9449   -6.7038    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0469   -5.8852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8571   -5.7292    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2557   -6.4515    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   10.0744   -6.5536    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3953   -7.3136    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.5721   -5.8957    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   10.3323   -5.1063    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.5528   -4.8362    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.0090   -4.6343    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.6670   -5.1320    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3969   -5.9116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8689   -6.5883    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4446   -8.1340    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2887   -7.3239    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8210   -8.6741    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6919  -10.8345    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    9.3156  -10.2944    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8478  -11.6446    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.6274  -11.9147    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2510  -11.3746    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.7833  -12.7248    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  1  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  1  0  0  0
  8 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 14 12  1  6  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 16 18  1  0  0  0  0
 14 19  1  0  0  0  0
 19 20  1  4  0  0  0
 19 21  2  0  0  0  0
 22 21  1  6  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 23 25  1  0  0  0  0
 25 26  1  0  0  0  0
 27 25  1  1  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
 28 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 30 34  1  0  0  0  0
 34 35  1  1  0  0  0
 35 36  2  0  0  0  0
 35 37  1  0  0  0  0
 37 38  1  0  0  0  0
 38 39  2  0  0  0  0
 38 40  1  0  0  0  0
 40 41  2  0  0  0  0
 41 42  1  0  0  0  0
 37 42  1  0  0  0  0
 42 43  1  0  0  0  0
 27 44  1  0  0  0  0
 44 45  1  0  0  0  0
 44 46  1  0  0  0  0
 22 47  1  0  0  0  0
 47 48  1  1  0  0  0
 47 49  1  0  0  0  0
 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
 50 52  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0173503

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCCC[C@@H](C)C[C@@H](C)C(=O)N(C)[C@@H](CC(C)C)C(O)=N[C@@H]([C@@H](C)OC(C)=O)C(=O)N(C)[C@@H](C(C)C)C(=O)N1CCC[C@H]1C(=O)N1C(C)C=CC1=O

> <INCHI_IDENTIFIER>
InChI=1S/C39H65N5O8/c1-13-14-16-25(6)22-26(7)36(48)41(11)31(21-23(2)3)35(47)40-33(28(9)52-29(10)45)38(50)42(12)34(24(4)5)39(51)43-20-15-17-30(43)37(49)44-27(8)18-19-32(44)46/h18-19,23-28,30-31,33-34H,13-17,20-22H2,1-12H3,(H,40,47)/t25-,26-,27?,28-,30+,31+,33+,34+/m1/s1

> <INCHI_KEY>
MNASOWORUXKEPP-MFEBLYKRSA-N

> <FORMULA>
C39H65N5O8

> <MOLECULAR_WEIGHT>
731.976

> <EXACT_MASS>
731.483314073

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
117

> <JCHEM_AVERAGE_POLARIZABILITY>
81.39069387032117

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2S)-N-[(1S,2R)-2-(acetyloxy)-1-{methyl[(2S)-3-methyl-1-[(2S)-2-(2-methyl-5-oxo-2,5-dihydro-1H-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2R,4R)-N,2,4-trimethyloctanamido]pentanimidic acid

> <ALOGPS_LOGP>
4.66

> <JCHEM_LOGP>
5.078631221

> <ALOGPS_LOGS>
-5.10

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
10.481276542852173

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.66776949497316

> <JCHEM_PKA_STRONGEST_BASIC>
0.5950331997281788

> <JCHEM_POLAR_SURFACE_AREA>
157.2

> <JCHEM_REFRACTIVITY>
198.91390000000007

> <JCHEM_ROTATABLE_BOND_COUNT>
19

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
5.78e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2S)-N-[(1S,2R)-2-(acetyloxy)-1-{methyl[(2S)-3-methyl-1-[(2S)-2-(2-methyl-5-oxo-2H-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2R,4R)-N,2,4-trimethyloctanamido]pentanimidic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 03-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   03-SEP-22         0                                  
HETATM    1  C   UNK     0      -0.946 -22.745   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.509 -23.249   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       1.673 -22.241   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       3.128 -22.745   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.293 -21.737   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       4.002 -20.224   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.748 -22.241   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       6.912 -21.233   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       6.621 -19.720   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       8.367 -21.737   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       8.658 -23.249   0.000  0.00  0.00           O+0
HETATM   12  N   UNK     0       9.531 -20.728   0.000  0.00  0.00           N+0
HETATM   13  C   UNK     0       9.240 -19.216   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      10.986 -21.233   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      11.277 -22.745   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      12.733 -23.249   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      13.897 -22.241   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      13.024 -24.761   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      12.150 -20.224   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0      11.859 -18.712   0.000  0.00  0.00           O+0
HETATM   21  N   UNK     0      13.606 -20.728   0.000  0.00  0.00           N+0
HETATM   22  C   UNK     0      14.770 -19.720   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      14.479 -18.208   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0      13.024 -17.704   0.000  0.00  0.00           O+0
HETATM   25  N   UNK     0      15.643 -17.200   0.000  0.00  0.00           N+0
HETATM   26  C   UNK     0      17.098 -17.704   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      15.352 -15.688   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      16.516 -14.679   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0      17.971 -15.184   0.000  0.00  0.00           O+0
HETATM   30  N   UNK     0      16.225 -13.167   0.000  0.00  0.00           N+0
HETATM   31  C   UNK     0      14.830 -12.514   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      15.021 -10.986   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      16.533 -10.695   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      17.277 -12.043   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      18.805 -12.233   0.000  0.00  0.00           C+0
HETATM   36  O   UNK     0      19.405 -13.652   0.000  0.00  0.00           O+0
HETATM   37  N   UNK     0      19.735 -11.005   0.000  0.00  0.00           N+0
HETATM   38  C   UNK     0      19.287  -9.532   0.000  0.00  0.00           C+0
HETATM   39  O   UNK     0      17.832  -9.028   0.000  0.00  0.00           O+0
HETATM   40  C   UNK     0      20.550  -8.651   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      21.778  -9.580   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0      21.274 -11.035   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0      22.155 -12.298   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0      13.897 -15.184   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0      13.606 -13.671   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0      12.733 -16.192   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      16.225 -20.224   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0      17.389 -19.216   0.000  0.00  0.00           C+0
HETATM   49  O   UNK     0      16.516 -21.737   0.000  0.00  0.00           O+0
HETATM   50  C   UNK     0      17.971 -22.241   0.000  0.00  0.00           C+0
HETATM   51  C   UNK     0      19.135 -21.233   0.000  0.00  0.00           C+0
HETATM   52  O   UNK     0      18.262 -23.753   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8                                                       
CONECT    8    7    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13   14                                                  
CONECT   13   12                                                            
CONECT   14   12   15   19                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16                                                            
CONECT   19   14   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   22                                                       
CONECT   22   21   23   47                                                  
CONECT   23   22   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28   44                                                  
CONECT   28   27   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28   31   34                                                  
CONECT   31   30   32                                                       
CONECT   32   31   33                                                       
CONECT   33   32   34                                                       
CONECT   34   33   30   35                                                  
CONECT   35   34   36   37                                                  
CONECT   36   35                                                            
CONECT   37   35   38   42                                                  
CONECT   38   37   39   40                                                  
CONECT   39   38                                                            
CONECT   40   38   41                                                       
CONECT   41   40   42                                                       
CONECT   42   41   37   43                                                  
CONECT   43   42                                                            
CONECT   44   27   45   46                                                  
CONECT   45   44                                                            
CONECT   46   44                                                            
CONECT   47   22   48   49                                                  
CONECT   48   47                                                            
CONECT   49   47   50                                                       
CONECT   50   49   51   52                                                  
CONECT   51   50                                                            
CONECT   52   50                                                            
MASTER        0    0    0    0    0    0    0    0   52    0  106    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₉H₆₅N₅O₈

Average Mass

731.9760 Da

Monoisotopic Mass

731.48331 Da

IUPAC Name

(2S)-N-[(1S,2R)-2-(acetyloxy)-1-{methyl[(2S)-3-methyl-1-[(2S)-2-(2-methyl-5-oxo-2,5-dihydro-1H-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2R,4R)-N,2,4-trimethyloctanamido]pentanimidic acid

Traditional Name

(2S)-N-[(1S,2R)-2-(acetyloxy)-1-{methyl[(2S)-3-methyl-1-[(2S)-2-(2-methyl-5-oxo-2H-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2R,4R)-N,2,4-trimethyloctanamido]pentanimidic acid

CAS Registry Number

Not Available

SMILES

CCCC[C@@H](C)C[C@@H](C)C(=O)N(C)[C@@H](CC(C)C)C(O)=N[C@@H]([C@@H](C)OC(C)=O)C(=O)N(C)[C@@H](C(C)C)C(=O)N1CCC[C@H]1C(=O)N1C(C)C=CC1=O

InChI Identifier

InChI=1S/C39H65N5O8/c1-13-14-16-25(6)22-26(7)36(48)41(11)31(21-23(2)3)35(47)40-33(28(9)52-29(10)45)38(50)42(12)34(24(4)5)39(51)43-20-15-17-30(43)37(49)44-27(8)18-19-32(44)46/h18-19,23-28,30-31,33-34H,13-17,20-22H2,1-12H3,(H,40,47)/t25-,26-,27?,28-,30+,31+,33+,34+/m1/s1

InChI Key

MNASOWORUXKEPP-MFEBLYKRSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as hybrid peptides. Hybrid peptides are compounds containing at least two different types of amino acids (alpha, beta, gamma, delta) linked to each other through a peptide bond.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Peptidomimetics

Sub Class

Hybrid peptides

Direct Parent

Hybrid peptides

Alternative Parents

Substituents

Hybrid peptide
Leucine or derivatives
Valine or derivatives
N-acyl-alpha amino acid or derivatives
Alpha-amino acid amide
Alpha-amino acid or derivatives
Pyrrolidine-2-carboxamide
Pyrrolidine carboxylic acid or derivatives
N-acylpyrrolidine
Fatty acyl
Carboxylic acid imide, n-substituted
N-acyl-amine
Fatty amide
Tertiary carboxylic acid amide
Pyrroline
Pyrrolidine
Dicarboximide
Carboxylic acid imide
Secondary carboxylic acid amide
Carboxylic acid ester
Carboxamide group
Azacycle
Organoheterocyclic compound
Monocarboxylic acid or derivatives
Carboxylic acid derivative
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Carbonyl group
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.66	ALOGPS
logP	5.08	ChemAxon
logS	-5.1	ALOGPS
pKa (Strongest Acidic)	4.67	ChemAxon
pKa (Strongest Basic)	0.6	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	157.2 Å²	ChemAxon
Rotatable Bond Count	19	ChemAxon
Refractivity	198.91 m³·mol⁻¹	ChemAxon
Polarizability	81.39 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

102330655

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Li FL, Fu V, Liu G, Tang T, Konradi AW, Peng X, Kemper E, Cravatt BF, Franklin JM, Wu Z, Mayfield J, Dixon JE, Gerwick WH, Guan KL: Hippo pathway regulation by phosphatidylinositol transfer protein and phosphoinositides. Nat Chem Biol. 2022 Oct;18(10):1076-1086. doi: 10.1038/s41589-022-01061-z. Epub 2022 Jul 4. [PubMed:35788180 ]
LOTUS database [Link]

Showing NP-Card for (2s)-n-[(1s,2r)-2-(acetyloxy)-1-{methyl[(2s)-3-methyl-1-[(2s)-2-(2-methyl-5-oxo-2h-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2r,4r)-n,2,4-trimethyloctanamido]pentanimidic acid (NP0173503)

MOL for NP0173503 ((2s)-n-[(1s,2r)-2-(acetyloxy)-1-{methyl[(2s)-3-methyl-1-[(2s)-2-(2-methyl-5-oxo-2h-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2r,4r)-n,2,4-trimethyloctanamido]pentanimidic acid)

3D MOL for NP0173503 ((2s)-n-[(1s,2r)-2-(acetyloxy)-1-{methyl[(2s)-3-methyl-1-[(2s)-2-(2-methyl-5-oxo-2h-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2r,4r)-n,2,4-trimethyloctanamido]pentanimidic acid)

3D SDF for NP0173503 ((2s)-n-[(1s,2r)-2-(acetyloxy)-1-{methyl[(2s)-3-methyl-1-[(2s)-2-(2-methyl-5-oxo-2h-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2r,4r)-n,2,4-trimethyloctanamido]pentanimidic acid)

3D-SDF for NP0173503 ((2s)-n-[(1s,2r)-2-(acetyloxy)-1-{methyl[(2s)-3-methyl-1-[(2s)-2-(2-methyl-5-oxo-2h-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2r,4r)-n,2,4-trimethyloctanamido]pentanimidic acid)

PDB for NP0173503 ((2s)-n-[(1s,2r)-2-(acetyloxy)-1-{methyl[(2s)-3-methyl-1-[(2s)-2-(2-methyl-5-oxo-2h-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2r,4r)-n,2,4-trimethyloctanamido]pentanimidic acid)

3D PDB for NP0173503 ((2s)-n-[(1s,2r)-2-(acetyloxy)-1-{methyl[(2s)-3-methyl-1-[(2s)-2-(2-methyl-5-oxo-2h-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2r,4r)-n,2,4-trimethyloctanamido]pentanimidic acid)

SMILES for NP0173503 ((2s)-n-[(1s,2r)-2-(acetyloxy)-1-{methyl[(2s)-3-methyl-1-[(2s)-2-(2-methyl-5-oxo-2h-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2r,4r)-n,2,4-trimethyloctanamido]pentanimidic acid)

INCHI for NP0173503 ((2s)-n-[(1s,2r)-2-(acetyloxy)-1-{methyl[(2s)-3-methyl-1-[(2s)-2-(2-methyl-5-oxo-2h-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2r,4r)-n,2,4-trimethyloctanamido]pentanimidic acid)

Structure for NP0173503 ((2s)-n-[(1s,2r)-2-(acetyloxy)-1-{methyl[(2s)-3-methyl-1-[(2s)-2-(2-methyl-5-oxo-2h-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2r,4r)-n,2,4-trimethyloctanamido]pentanimidic acid)

3D Structure for NP0173503 ((2s)-n-[(1s,2r)-2-(acetyloxy)-1-{methyl[(2s)-3-methyl-1-[(2s)-2-(2-methyl-5-oxo-2h-pyrrole-1-carbonyl)pyrrolidin-1-yl]-1-oxobutan-2-yl]carbamoyl}propyl]-4-methyl-2-[(2r,4r)-n,2,4-trimethyloctanamido]pentanimidic acid)