NP-MRD: Showing NP-Card for methyl 2-[(1s,7s,9s,10s,16r,18r,19r)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0²,¹⁵.0⁴,¹³.0⁶,¹¹]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate (NP0172392)

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Record Information

Version

2.0

Created at

2022-09-03 09:17:36 UTC

Updated at

2022-09-03 09:17:36 UTC

NP-MRD ID

NP0172392

Secondary Accession Numbers

None

Natural Product Identification

Common Name

methyl 2-[(1s,7s,9s,10s,16r,18r,19r)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0²,¹⁵.0⁴,¹³.0⁶,¹¹]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate

Description

Methyl 2-[(1S,7S,9S,10S,16R,18R,19R)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0²,¹⁵.0⁴,¹³.0⁶,¹¹]Icosa-2(15),4(13),5,11-tetraen-9-yl]acetate belongs to the class of organic compounds known as hydroxyanthraquinones. Hydroxyanthraquinones are compounds containing a hydroxyanthraquinone moiety, which consists of an anthracene bearing a quinone, and hydroxyl group. Based on a literature review very few articles have been published on methyl 2-[(1S,7S,9S,10S,16R,18R,19R)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0²,¹⁵.0⁴,¹³.0⁶,¹¹]Icosa-2(15),4(13),5,11-tetraen-9-yl]acetate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309032211172D          

 34 38  0  0  1  0            999 V2000
    9.1416    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4272    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.7127    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7127    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.9982    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2837    0.8250    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.2837    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.5693   -0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.5693   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8548   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1403   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1403   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4259   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4259    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1403    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1403    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8548    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5693    1.2375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.5693    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7114    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7114    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9969    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9969    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7114   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7114   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2825   -0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2825   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5680   -0.0000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1465   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5680    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2825    1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1450    0.6875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1450    0.1375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.3351    0.2947    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  6  5  1  6  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  1  0  0  0
  8 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 15 17  2  0  0  0  0
 10 17  1  0  0  0  0
 17 18  1  0  0  0  0
  6 18  1  0  0  0  0
 18 19  1  6  0  0  0
 14 20  1  0  0  0  0
 20 21  2  0  0  0  0
 20 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 13 24  1  0  0  0  0
 24 25  2  0  0  0  0
 23 26  1  0  0  0  0
 26 27  1  1  0  0  0
 26 28  1  0  0  0  0
 28 29  1  6  0  0  0
 28 30  1  0  0  0  0
 30 31  1  0  0  0  0
 22 31  1  0  0  0  0
 31 32  1  1  0  0  0
 32 33  1  0  0  0  0
 26 33  1  0  0  0  0
 33 34  1  1  0  0  0
M  END

     RDKit          3D

 58 62  0  0  0  0  0  0  0  0999 V2000
    8.1632    1.6739    0.4030 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1013    1.1457   -0.4074 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.3138    0.0956    0.0519 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5312   -0.3959    1.1809 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2292   -0.4093   -0.8285 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8779    0.1728   -0.4110 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.5984   -0.1799    0.8701 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6866   -1.1762    1.0488 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.6128   -1.5750    2.4761 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4099   -0.7720    0.4295 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1815   -0.8409    1.0592 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1597   -1.3042    2.3197 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9282   -0.4306    0.3510 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8593    0.0440   -0.9566 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4041    0.0991   -1.5616 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4831    0.5690   -2.8610 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4866   -0.3058   -0.8577 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8718   -0.2674   -1.4410 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.2125   -1.4783   -2.0356 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0234    0.4834   -1.7218 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9151    0.9037   -2.8961 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3188    0.4142   -1.0647 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4377   -0.0302    0.1784 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2826   -0.4695    0.9470 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4213   -0.8853    2.1216 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8257   -0.0367    0.6933 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.9666   -0.3791    2.0023 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5838   -0.9821   -0.2508 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.8025   -2.1365   -0.3314 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6216   -0.3229   -1.6008 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6031    0.8210   -1.6908 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.1248    1.8170   -0.8387 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3515    1.3840    0.4393 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.6101    2.2809    1.4086 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1155    1.2041    0.1301 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8723    1.4308    1.4505 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.1263    2.7602    0.2985 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4491   -0.1377   -1.8737 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1727   -1.5226   -0.8104 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9948    1.2781   -0.4519 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0373   -2.0769    0.4739 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1064   -2.5456    2.6261 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2692   -0.7693    3.1506 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6807   -1.7686    2.7970 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5523   -1.4395    2.9409 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2777    0.6691   -3.4305 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8574    0.5032   -2.2328 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1748   -1.4648   -3.0120 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4292    0.2336    2.5520 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5831   -1.1867    0.1651 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8441   -1.9248   -0.4151 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6376    0.1510   -1.6873 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5084   -1.0425   -2.4177 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5195    1.1950   -2.6998 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4412    1.4110    0.6674 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6829    3.3419    1.0766 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5377    1.9991    1.4202 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0456    2.1753    2.4453 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  8 10  1  0
 10 11  2  0
 11 12  1  0
 11 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  1  0
 15 17  2  0
 17 18  1  0
 18 19  1  0
 14 20  1  0
 20 21  2  0
 20 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  2  0
 23 26  1  0
 26 27  1  1
 26 33  1  0
 33 34  1  0
 33 32  1  0
 32 31  1  0
 31 30  1  0
 30 28  1  0
 28 29  1  0
 18  6  1  0
 31 22  1  0
 17 10  1  0
 28 26  1  0
 24 13  1  0
  1 35  1  0
  1 36  1  0
  1 37  1  0
  5 38  1  0
  5 39  1  0
  6 40  1  1
  8 41  1  6
  9 42  1  0
  9 43  1  0
  9 44  1  0
 12 45  1  0
 16 46  1  0
 18 47  1  6
 19 48  1  0
 27 49  1  0
 33 55  1  1
 34 56  1  0
 34 57  1  0
 34 58  1  0
 31 54  1  6
 30 52  1  0
 30 53  1  0
 28 50  1  1
 29 51  1  0
M  END


  Mrv1652309032211172D          

 34 38  0  0  1  0            999 V2000
    9.1416    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4272    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.7127    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7127    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.9982    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2837    0.8250    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.2837    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.5693   -0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.5693   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8548   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1403   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1403   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4259   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4259    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1403    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1403    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8548    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5693    1.2375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.5693    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7114    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7114    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9969    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9969    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7114   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7114   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2825   -0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.2825   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5680   -0.0000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1465   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5680    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2825    1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1450    0.6875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1450    0.1375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.3351    0.2947    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  6  5  1  6  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  1  0  0  0
  8 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 15 17  2  0  0  0  0
 10 17  1  0  0  0  0
 17 18  1  0  0  0  0
  6 18  1  0  0  0  0
 18 19  1  6  0  0  0
 14 20  1  0  0  0  0
 20 21  2  0  0  0  0
 20 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 13 24  1  0  0  0  0
 24 25  2  0  0  0  0
 23 26  1  0  0  0  0
 26 27  1  1  0  0  0
 26 28  1  0  0  0  0
 28 29  1  6  0  0  0
 28 30  1  0  0  0  0
 30 31  1  0  0  0  0
 22 31  1  0  0  0  0
 31 32  1  1  0  0  0
 32 33  1  0  0  0  0
 26 33  1  0  0  0  0
 33 34  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0172392

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(=O)C[C@@H]1O[C@@H](C)C2=C(O)C3=C(C(O)=C2[C@@H]1O)C(=O)C1=C(C3=O)[C@@]2(O)[C@@H](C)O[C@@H]1C[C@H]2O

> <INCHI_IDENTIFIER>
InChI=1S/C23H24O11/c1-6-12-14(18(26)9(33-6)5-11(25)32-3)21(29)15-16(19(12)27)22(30)17-13(20(15)28)8-4-10(24)23(17,31)7(2)34-8/h6-10,18,24,26-27,29,31H,4-5H2,1-3H3/t6-,7+,8+,9-,10+,18+,23+/m0/s1

> <INCHI_KEY>
OUSFRMRUMIYAOA-VDUSGPLOSA-N

> <FORMULA>
C23H24O11

> <MOLECULAR_WEIGHT>
476.434

> <EXACT_MASS>
476.131861593

> <JCHEM_ACCEPTOR_COUNT>
10

> <JCHEM_ATOM_COUNT>
58

> <JCHEM_AVERAGE_POLARIZABILITY>
46.41305392274479

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl 2-[(1S,7S,9S,10S,16R,18R,19R)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0^{2,15}.0^{4,13}.0^{6,11}]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate

> <ALOGPS_LOGP>
1.13

> <JCHEM_LOGP>
-0.05977344400000101

> <ALOGPS_LOGS>
-1.94

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
10.199413099041298

> <JCHEM_PKA_STRONGEST_ACIDIC>
8.102413747852248

> <JCHEM_PKA_STRONGEST_BASIC>
-3.349143700187958

> <JCHEM_POLAR_SURFACE_AREA>
180.04999999999998

> <JCHEM_REFRACTIVITY>
113.42479999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
5.53e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
methyl [(1S,7S,9S,10S,16R,18R,19R)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0^{2,15}.0^{4,13}.0^{6,11}]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 03-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   03-SEP-22         0                                  
HETATM    1  C   UNK     0      17.064   1.540   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0      15.731   2.310   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0      14.397   1.540   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      14.397   0.000   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0      13.063   2.310   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      11.730   1.540   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0      11.730   0.000   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0      10.396  -0.770   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      10.396  -2.310   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       9.062  -0.000   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       7.729  -0.770   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       7.729  -2.310   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       6.395  -0.000   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       6.395   1.540   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       7.729   2.310   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       7.729   3.850   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0       9.062   1.540   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      10.396   2.310   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      10.396   3.850   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       5.061   2.310   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       5.061   3.850   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       3.728   1.540   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       3.728   0.000   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       5.061  -0.770   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       5.061  -2.310   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       2.394  -0.770   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       2.394  -2.310   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0       1.060  -0.000   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0      -0.273  -0.770   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0       1.060   1.540   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       2.394   2.310   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0       2.137   1.283   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0       2.137   0.257   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       0.625   0.550   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6                                                       
CONECT    6    5    7   18                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8   11   17                                                  
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14   24                                                  
CONECT   14   13   15   20                                                  
CONECT   15   14   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15   10   18                                                  
CONECT   18   17    6   19                                                  
CONECT   19   18                                                            
CONECT   20   14   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20   23   31                                                  
CONECT   23   22   24   26                                                  
CONECT   24   23   13   25                                                  
CONECT   25   24                                                            
CONECT   26   23   27   28   33                                             
CONECT   27   26                                                            
CONECT   28   26   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28   31                                                       
CONECT   31   30   22   32                                                  
CONECT   32   31   33                                                       
CONECT   33   32   26   34                                                  
CONECT   34   33                                                            
MASTER        0    0    0    0    0    0    0    0   34    0   76    0
END

View in JSmol

Synonyms

Value	Source
Methyl 2-[(1S,7S,9S,10S,16R,18R,19R)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0,.0,.0,]icosa-2(15),4(13),5,11-tetraen-9-yl]acetic acid	Generator

Chemical Formula

C₂₃H₂₄O₁₁

Average Mass

476.4340 Da

Monoisotopic Mass

476.13186 Da

IUPAC Name

methyl 2-[(1S,7S,9S,10S,16R,18R,19R)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0^{2,15}.0^{4,13}.0^{6,11}]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate

Traditional Name

methyl [(1S,7S,9S,10S,16R,18R,19R)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0^{2,15}.0^{4,13}.0^{6,11}]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate

CAS Registry Number

Not Available

SMILES

COC(=O)C[C@@H]1O[C@@H](C)C2=C(O)C3=C(C(O)=C2[C@@H]1O)C(=O)C1=C(C3=O)[C@@]2(O)[C@@H](C)O[C@@H]1C[C@H]2O

InChI Identifier

InChI=1S/C23H24O11/c1-6-12-14(18(26)9(33-6)5-11(25)32-3)21(29)15-16(19(12)27)22(30)17-13(20(15)28)8-4-10(24)23(17,31)7(2)34-8/h6-10,18,24,26-27,29,31H,4-5H2,1-3H3/t6-,7+,8+,9-,10+,18+,23+/m0/s1

InChI Key

OUSFRMRUMIYAOA-VDUSGPLOSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as hydroxyanthraquinones. Hydroxyanthraquinones are compounds containing a hydroxyanthraquinone moiety, which consists of an anthracene bearing a quinone, and hydroxyl group.

Kingdom

Super Class

Class

Sub Class

Direct Parent

Hydroxyanthraquinones

Alternative Parents

Substituents

Benzoisochromanequinone
Hydroxyanthraquinone
Isochromanequinone
Naphthopyranone
Naphthopyran
Benzopyran
Isochromane
Naphthalene
2-benzopyran
Aryl ketone
Quinone
Phenol
Pyranone
Oxane
Pyran
Vinylogous acid
Methyl ester
Tertiary alcohol
Ketone
Carboxylic acid ester
Secondary alcohol
Carboxylic acid derivative
Oxacycle
Dialkyl ether
Ether
Organoheterocyclic compound
Polyol
Monocarboxylic acid or derivatives
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Carbonyl group
Organooxygen compound
Alcohol
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.13	ALOGPS
logP	-0.06	ChemAxon
logS	-1.9	ALOGPS
pKa (Strongest Acidic)	8.1	ChemAxon
pKa (Strongest Basic)	-3.3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	10	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	180.05 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	113.42 m³·mol⁻¹	ChemAxon
Polarizability	46.41 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101288430

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for methyl 2-[(1s,7s,9s,10s,16r,18r,19r)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0²,¹⁵.0⁴,¹³.0⁶,¹¹]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate (NP0172392)

MOL for NP0172392 (methyl 2-[(1s,7s,9s,10s,16r,18r,19r)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0²,¹⁵.0⁴,¹³.0⁶,¹¹]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate)

3D MOL for NP0172392 (methyl 2-[(1s,7s,9s,10s,16r,18r,19r)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0²,¹⁵.0⁴,¹³.0⁶,¹¹]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate)

3D SDF for NP0172392 (methyl 2-[(1s,7s,9s,10s,16r,18r,19r)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0²,¹⁵.0⁴,¹³.0⁶,¹¹]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate)

3D-SDF for NP0172392 (methyl 2-[(1s,7s,9s,10s,16r,18r,19r)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0²,¹⁵.0⁴,¹³.0⁶,¹¹]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate)

PDB for NP0172392 (methyl 2-[(1s,7s,9s,10s,16r,18r,19r)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0²,¹⁵.0⁴,¹³.0⁶,¹¹]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate)

3D PDB for NP0172392 (methyl 2-[(1s,7s,9s,10s,16r,18r,19r)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0²,¹⁵.0⁴,¹³.0⁶,¹¹]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate)

SMILES for NP0172392 (methyl 2-[(1s,7s,9s,10s,16r,18r,19r)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0²,¹⁵.0⁴,¹³.0⁶,¹¹]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate)

INCHI for NP0172392 (methyl 2-[(1s,7s,9s,10s,16r,18r,19r)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0²,¹⁵.0⁴,¹³.0⁶,¹¹]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate)

Structure for NP0172392 (methyl 2-[(1s,7s,9s,10s,16r,18r,19r)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0²,¹⁵.0⁴,¹³.0⁶,¹¹]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate)

3D Structure for NP0172392 (methyl 2-[(1s,7s,9s,10s,16r,18r,19r)-1,5,10,12,19-pentahydroxy-7,18-dimethyl-3,14-dioxo-8,17-dioxapentacyclo[14.2.2.0²,¹⁵.0⁴,¹³.0⁶,¹¹]icosa-2(15),4(13),5,11-tetraen-9-yl]acetate)