NP-MRD: Showing NP-Card for (1r,2r,4s,5r,9s,10s,12r,13r,14s)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid (NP0171744)

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Record Information

Version

2.0

Created at

2022-09-03 08:23:03 UTC

Updated at

2022-09-03 08:23:03 UTC

NP-MRD ID

NP0171744

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1r,2r,4s,5r,9s,10s,12r,13r,14s)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid

Description

Ciliaric acid, also known as ciliarate, belongs to the class of organic compounds known as kaurane diterpenoids. These are diterpene alkaloids with a structure that is based on the kaurane skeleton. Kaurane is a tetracyclic compound that arises by cyclisation of a pimarane precursor followed by rearrangement. It possesses a [3,2,1]-bicyclic ring system with C15-C16 bridge connected to C13, forming the five-membered ring D. (1r,2r,4s,5r,9s,10s,12r,13r,14s)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid is found in Helianthus annuus, Helianthus divaricatus, Helianthus nuttallii, Helianthus occidentalis, Helianthus pauciflorus and Helianthus petiolaris. (1r,2r,4s,5r,9s,10s,12r,13r,14s)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid was first documented in 2007 (PMID: 17518044). Based on a literature review very few articles have been published on Ciliaric acid (PMID: 32478640).

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 53 57  0  0  0  0  0  0  0  0999 V2000
   -0.5577    1.8213   -0.7358 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5819    0.7601    0.2847 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.2284    1.3208    1.5469 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5858    1.8995    1.2272 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2723    1.2191    0.1010 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8688   -0.2247   -0.0810 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.5840   -1.0066    1.0375 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5033   -0.6894   -1.3301 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0477    0.1238   -2.1568 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5729   -2.0163   -1.7253 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4213   -0.4624   -0.0686 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7863   -1.0886   -1.2565 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5067   -1.7669   -0.7543 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1250   -2.4499   -1.7841 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4010   -0.7029   -0.2355 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.1577   -0.1052   -1.3820 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2841    0.5975   -0.7387 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.1287    1.1013    0.6063 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.7340    1.3175    1.1116 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7725    0.2503    0.7092 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5871   -0.2693    0.4993 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.0450   -0.6278    0.6478 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5666   -1.3493    0.5366 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4528    2.2085   -0.9903 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1090    2.7536   -0.4073 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0213    1.5582   -1.7068 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5792    2.0768    2.0344 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3945    0.4556    2.2218 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1910    1.8169    2.1772 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5314    2.9854    1.0203 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3731    1.1856    0.3642 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2389    1.7618   -0.8599 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9159   -1.8524    1.3053 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6447   -0.3246    1.9270 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5646   -1.3669    0.7201 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4519   -2.5075   -1.8602 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2108   -1.1675    0.7996 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4347   -0.3459   -2.0162 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3427   -1.8672   -1.7727 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1686   -2.4749    0.0320 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6751   -2.2588   -2.6339 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5972   -0.9895   -1.9376 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5752    0.4301   -2.1182 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1495    0.9305   -1.3511 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8518    1.8650    0.9531 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8262    1.4159    2.2360 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4298    2.3472    0.7887 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5603   -0.3499    1.6496 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5659    0.1789    1.1949 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5084   -0.6779   -0.3761 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2165   -1.6001    1.1182 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8984   -2.2261   -0.0262 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2301   -1.6125    1.5680 H   0  0  0  0  0  0  0  0  0  0  0  0
 21 22  1  6
 21 23  1  0
 15 23  1  1
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20  2  1  0
  2  1  1  6
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  6 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
  6  8  1  6
  8 10  1  0
  8  9  2  0
 17 21  1  0
 11  2  1  0
 18 21  1  0
 20 15  1  0
 13 15  1  0
 22 49  1  0
 22 50  1  0
 22 51  1  0
 23 52  1  0
 23 53  1  0
 16 42  1  0
 16 43  1  0
 17 44  1  6
 18 45  1  6
 19 46  1  0
 19 47  1  0
 20 48  1  1
  1 24  1  0
  1 25  1  0
  1 26  1  0
  3 27  1  0
  3 28  1  0
  4 29  1  0
  4 30  1  0
  5 31  1  0
  5 32  1  0
  7 33  1  0
  7 34  1  0
  7 35  1  0
 11 37  1  1
 12 38  1  0
 12 39  1  0
 13 40  1  1
 14 41  1  0
 10 36  1  0
M  END


  Mrv1652309032210232D          

 23 27  0  0  1  0            999 V2000
    1.8914    1.3140    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2848    0.5889    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.6859    1.3098    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5108    1.3229    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9346    0.6151    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5335   -0.1059    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.3131   -0.3757    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4032   -0.9205    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6325   -1.2150    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0435   -1.4407    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7086   -0.1190    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.2789   -0.8247    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4299   -0.7421    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0312   -1.4644    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8668   -0.0150    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.0658    0.4437    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6620    0.6943    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.0949    1.0618    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8220    1.3138    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3803    0.6512    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4573    0.0498    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.2547   -0.1619    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2330   -0.5410    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  6  0  0  0
  6  8  1  1  0  0  0
  8  9  2  0  0  0  0
  8 10  1  0  0  0  0
  6 11  1  0  0  0  0
  2 11  1  0  0  0  0
 11 12  1  1  0  0  0
 12 13  1  0  0  0  0
 13 14  1  1  0  0  0
 13 15  1  0  0  0  0
 15 16  1  1  0  0  0
 17 16  1  1  0  0  0
 17 18  1  0  0  0  0
 18 19  1  1  0  0  0
 20 19  1  1  0  0  0
  2 20  1  0  0  0  0
 15 20  1  0  0  0  0
 18 21  1  0  0  0  0
 17 21  1  0  0  0  0
 21 22  1  6  0  0  0
 21 23  1  0  0  0  0
 15 23  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0171744

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@]12C[C@]34C[C@H]1[C@H]2C[C@H]3[C@]1(C)CCC[C@](C)([C@H]1C[C@H]4O)C(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C20H30O3/c1-17-5-4-6-18(2,16(22)23)13(17)8-15(21)20-9-12-11(7-14(17)20)19(12,3)10-20/h11-15,21H,4-10H2,1-3H3,(H,22,23)/t11-,12+,13+,14+,15-,17-,18-,19-,20-/m1/s1

> <INCHI_KEY>
REFPIPGRFRVTDA-UXFRUBCJSA-N

> <FORMULA>
C20H30O3

> <MOLECULAR_WEIGHT>
318.457

> <EXACT_MASS>
318.219494826

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
53

> <JCHEM_AVERAGE_POLARIZABILITY>
36.2107512687215

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,2R,4S,5R,9S,10S,12R,13R,14S)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0^{1,10}.0^{4,9}.0^{12,14}]hexadecane-5-carboxylic acid

> <ALOGPS_LOGP>
2.28

> <JCHEM_LOGP>
3.1588684920000007

> <ALOGPS_LOGS>
-3.78

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.635589846513509

> <JCHEM_PKA_STRONGEST_BASIC>
-0.4031043639739539

> <JCHEM_POLAR_SURFACE_AREA>
57.53

> <JCHEM_REFRACTIVITY>
87.1211

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
5.30e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2R,4S,5R,9S,10S,12R,13R,14S)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0^{1,10}.0^{4,9}.0^{12,14}]hexadecane-5-carboxylic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 03-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   03-SEP-22         0                                  
HETATM    1  C   UNK     0       3.531   2.453   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       4.265   1.099   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       5.014   2.445   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       6.553   2.469   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       7.345   1.148   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       6.596  -0.198   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       8.051  -0.701   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       6.353  -1.718   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0       4.914  -2.268   0.000  0.00  0.00           O+0
HETATM   10  O   UNK     0       7.548  -2.689   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       5.056  -0.222   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       4.254  -1.539   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.669  -1.385   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       1.925  -2.733   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       1.618  -0.028   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.123   0.828   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -1.236   1.296   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -0.177   1.982   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       1.534   2.452   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       2.577   1.216   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -0.854   0.093   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -2.342  -0.302   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       0.435  -1.010   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   11   20                                             
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7    8   11                                             
CONECT    7    6                                                            
CONECT    8    6    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8                                                            
CONECT   11    6    2   12                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16   20   23                                             
CONECT   16   15   17                                                       
CONECT   17   16   18   21                                                  
CONECT   18   17   19   21                                                  
CONECT   19   18   20                                                       
CONECT   20   19    2   15                                                  
CONECT   21   18   17   22   23                                             
CONECT   22   21                                                            
CONECT   23   21   15                                                       
MASTER        0    0    0    0    0    0    0    0   23    0   54    0
END

View in JSmol

Synonyms

Value	Source
Ciliarate	Generator

Chemical Formula

C₂₀H₃₀O₃

Average Mass

318.4570 Da

Monoisotopic Mass

318.21949 Da

IUPAC Name

(1R,2R,4S,5R,9S,10S,12R,13R,14S)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0^{1,10}.0^{4,9}.0^{12,14}]hexadecane-5-carboxylic acid

Traditional Name

(1R,2R,4S,5R,9S,10S,12R,13R,14S)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0^{1,10}.0^{4,9}.0^{12,14}]hexadecane-5-carboxylic acid

CAS Registry Number

Not Available

SMILES

C[C@]12C[C@]34C[C@H]1[C@H]2C[C@H]3[C@]1(C)CCC[C@](C)([C@H]1C[C@H]4O)C(O)=O

InChI Identifier

InChI=1S/C20H30O3/c1-17-5-4-6-18(2,16(22)23)13(17)8-15(21)20-9-12-11(7-14(17)20)19(12,3)10-20/h11-15,21H,4-10H2,1-3H3,(H,22,23)/t11-,12+,13+,14+,15-,17-,18-,19-,20-/m1/s1

InChI Key

REFPIPGRFRVTDA-UXFRUBCJSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Helianthus annuus	LOTUS Database	35616633
Helianthus divaricatus	LOTUS Database	35616633
Helianthus nuttallii	LOTUS Database	35616633
Helianthus occidentalis	LOTUS Database	35616633
Helianthus pauciflorus	LOTUS Database	35616633
Helianthus petiolaris	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as kaurane diterpenoids. These are diterpene alkaloids with a structure that is based on the kaurane skeleton. Kaurane is a tetracyclic compound that arises by cyclisation of a pimarane precursor followed by rearrangement. It possesses a [3,2,1]-bicyclic ring system with C15-C16 bridge connected to C13, forming the five-membered ring D.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Diterpenoids

Direct Parent

Kaurane diterpenoids

Alternative Parents

Substituents

Atisane diterpenoid
Kaurane diterpenoid
Villanovane, atisane, trachylobane or helvifulvane diterpenoid
Alkaloid or derivatives
Cyclic alcohol
Secondary alcohol
Carboxylic acid derivative
Carboxylic acid
Monocarboxylic acid or derivatives
Organic oxide
Alcohol
Carbonyl group
Organic oxygen compound
Organooxygen compound
Hydrocarbon derivative
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.28	ALOGPS
logP	3.16	ChemAxon
logS	-3.8	ALOGPS
pKa (Strongest Acidic)	4.64	ChemAxon
pKa (Strongest Basic)	-0.4	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	57.53 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	87.12 m³·mol⁻¹	ChemAxon
Polarizability	36.21 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101316716

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Anantachoke N, Lovacharaporn D, Reutrakul V, Michel S, Gaslonde T, Piyachaturawat P, Suksen K, Prabpai S, Nuntasaen N: Cytotoxic compounds from the leaves and stems of the endemic Thai plant Mitrephora sirikitiae. Pharm Biol. 2020 Dec;58(1):490-497. doi: 10.1080/13880209.2020.1765813. [PubMed:32478640 ]
Suo MR, Tian Z, Yang JS, Lu Y, Wu L, Li W: Diterpenes from Helianthus annuus and their cytotoxicity in vitro. Yao Xue Xue Bao. 2007 Feb;42(2):166-70. [PubMed:17518044 ]
LOTUS database [Link]

Showing NP-Card for (1r,2r,4s,5r,9s,10s,12r,13r,14s)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid (NP0171744)

MOL for NP0171744 ((1r,2r,4s,5r,9s,10s,12r,13r,14s)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid)

3D MOL for NP0171744 ((1r,2r,4s,5r,9s,10s,12r,13r,14s)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid)

3D SDF for NP0171744 ((1r,2r,4s,5r,9s,10s,12r,13r,14s)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid)

3D-SDF for NP0171744 ((1r,2r,4s,5r,9s,10s,12r,13r,14s)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid)

PDB for NP0171744 ((1r,2r,4s,5r,9s,10s,12r,13r,14s)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid)

3D PDB for NP0171744 ((1r,2r,4s,5r,9s,10s,12r,13r,14s)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid)

SMILES for NP0171744 ((1r,2r,4s,5r,9s,10s,12r,13r,14s)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid)

INCHI for NP0171744 ((1r,2r,4s,5r,9s,10s,12r,13r,14s)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid)

Structure for NP0171744 ((1r,2r,4s,5r,9s,10s,12r,13r,14s)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid)

3D Structure for NP0171744 ((1r,2r,4s,5r,9s,10s,12r,13r,14s)-2-hydroxy-5,9,13-trimethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane-5-carboxylic acid)