Np mrd loader

Showing NP-Card for 4,4,4a,6a,6b,8a,11,11,14b-nonamethyl-2,3,5,6,7,8,9,10,12,12a,14,14a-dodecahydro-1h-picen-3-ol (NP0170104)

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Record Information
Version2.0
Created at2022-09-03 06:11:11 UTC
Updated at2022-09-03 06:11:12 UTC
NP-MRD IDNP0170104
Secondary Accession NumbersNone
Natural Product Identification
Common Name4,4,4a,6a,6b,8a,11,11,14b-nonamethyl-2,3,5,6,7,8,9,10,12,12a,14,14a-dodecahydro-1h-picen-3-ol
Description4,4,4A,6a,6b,8a,11,11,14b-nonamethyl-1,2,3,4,4a,5,6,6a,6b,7,8,8a,9,10,11,12,12a,14,14a,14b-icosahydropicen-3-ol belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. 4,4,4a,6a,6b,8a,11,11,14b-nonamethyl-2,3,5,6,7,8,9,10,12,12a,14,14a-dodecahydro-1h-picen-3-ol is found in Sanvitalia procumbens. Based on a literature review very few articles have been published on 4,4,4a,6a,6b,8a,11,11,14b-nonamethyl-1,2,3,4,4a,5,6,6a,6b,7,8,8a,9,10,11,12,12a,14,14a,14b-icosahydropicen-3-ol.
Structure
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MOLSDFPDBSMILESInChI

MOL for NP0170104 (4,4,4a,6a,6b,8a,11,11,14b-nonamethyl-2,3,5,6,7,8,9,10,12,12a,14,14a-dodecahydro-1h-picen-3-ol)


  Mrv1652309032208112D          

 32 36  0  0  0  0            999 V2000
    3.8136   -3.0591    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5888   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7321   -3.5894    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1763   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5888   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4138   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8263   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6513   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0638   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4763   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6513   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0638   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8888   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3013   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8888   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9750   -0.5275    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3013   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1263   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.5388   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.9513   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3638   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2205   -0.5356    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.1390   -1.0659    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7763   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.6013   -2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.3638   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.5388   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1263   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7138   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8263   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4138   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  2  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 10 16  1  0  0  0  0
 16 17  1  0  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 20 22  1  0  0  0  0
 22 23  1  0  0  0  0
 22 24  1  0  0  0  0
 22 25  1  0  0  0  0
 25 26  1  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 15 29  1  0  0  0  0
 20 29  1  0  0  0  0
 29 30  1  0  0  0  0
 12 31  1  0  0  0  0
  6 31  1  0  0  0  0
 31 32  1  0  0  0  0
  2 32  1  0  0  0  0
M  END
Download

3D MOL for NP0170104 (4,4,4a,6a,6b,8a,11,11,14b-nonamethyl-2,3,5,6,7,8,9,10,12,12a,14,14a-dodecahydro-1h-picen-3-ol)

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3D SDF for NP0170104 (4,4,4a,6a,6b,8a,11,11,14b-nonamethyl-2,3,5,6,7,8,9,10,12,12a,14,14a-dodecahydro-1h-picen-3-ol)

  Mrv1652309032208112D          

 32 36  0  0  0  0            999 V2000
    3.8136   -3.0591    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5888   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7321   -3.5894    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1763   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5888   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4138   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8263   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6513   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0638   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4763   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6513   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0638   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8888   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3013   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8888   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9750   -0.5275    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3013   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1263   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.5388   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.9513   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3638   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2205   -0.5356    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.1390   -1.0659    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7763   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.6013   -2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.3638   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.5388   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1263   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7138   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8263   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4138   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  2  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 10 16  1  0  0  0  0
 16 17  1  0  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 20 22  1  0  0  0  0
 22 23  1  0  0  0  0
 22 24  1  0  0  0  0
 22 25  1  0  0  0  0
 25 26  1  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 15 29  1  0  0  0  0
 20 29  1  0  0  0  0
 29 30  1  0  0  0  0
 12 31  1  0  0  0  0
  6 31  1  0  0  0  0
 31 32  1  0  0  0  0
  2 32  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0170104

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC1(C)CCC2(C)CCC3(C)C(=CCC4C3(C)CCC3(C)C(C)(C)C(O)CCC43C)C2C1

> <INCHI_IDENTIFIER>
InChI=1S/C31H52O/c1-25(2)14-15-27(5)16-17-28(6)21(22(27)20-25)10-11-23-29(28,7)18-19-31(9)26(3,4)24(32)12-13-30(23,31)8/h10,22-24,32H,11-20H2,1-9H3

> <INCHI_KEY>
VIKGRJCBJFQYAR-UHFFFAOYSA-N

> <FORMULA>
C31H52O

> <MOLECULAR_WEIGHT>
440.756

> <EXACT_MASS>
440.401816294

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_ATOM_COUNT>
84

> <JCHEM_AVERAGE_POLARIZABILITY>
55.86341819252099

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
4,4,4a,6a,6b,8a,11,11,14b-nonamethyl-1,2,3,4,4a,5,6,6a,6b,7,8,8a,9,10,11,12,12a,14,14a,14b-icosahydropicen-3-ol

> <ALOGPS_LOGP>
8.36

> <JCHEM_LOGP>
7.703187954333332

> <ALOGPS_LOGS>
-6.71

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
19.817568622272994

> <JCHEM_PKA_STRONGEST_BASIC>
-0.6915954846177924

> <JCHEM_POLAR_SURFACE_AREA>
20.23

> <JCHEM_REFRACTIVITY>
136.38240000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
8.56e-05 g/l

> <JCHEM_TRADITIONAL_IUPAC>
4,4,4a,6a,6b,8a,11,11,14b-nonamethyl-2,3,5,6,7,8,9,10,12,12a,14,14a-dodecahydro-1H-picen-3-ol

> <JCHEM_VEBER_RULE>
1

$$$$

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3D-SDF for NP0170104 (4,4,4a,6a,6b,8a,11,11,14b-nonamethyl-2,3,5,6,7,8,9,10,12,12a,14,14a-dodecahydro-1h-picen-3-ol)
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PDB for NP0170104 (4,4,4a,6a,6b,8a,11,11,14b-nonamethyl-2,3,5,6,7,8,9,10,12,12a,14,14a-dodecahydro-1h-picen-3-ol)
HEADER    PROTEIN                                 03-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   03-SEP-22         0                                  
HETATM    1  C   UNK     0       7.119  -5.710   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       8.566  -5.184   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       8.833  -6.700   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       7.796  -3.850   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       8.566  -2.516   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      10.106  -2.516   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       9.336  -1.183   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      10.876  -1.183   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      12.416  -1.183   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      13.186  -2.516   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      13.956  -1.183   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      12.416  -3.850   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      13.186  -5.184   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      14.726  -5.184   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      15.496  -3.850   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      14.726  -2.516   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      14.887  -0.985   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      15.496  -1.183   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      17.036  -1.183   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      17.806  -2.516   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      18.576  -1.183   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      19.346  -2.516   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      19.078  -1.000   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      20.793  -1.990   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      20.116  -3.850   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      21.656  -3.850   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      19.346  -5.184   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      17.806  -5.184   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      17.036  -3.850   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      16.266  -5.184   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      10.876  -3.850   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      10.106  -5.184   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    4   32                                             
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7    8   31                                             
CONECT    7    6                                                            
CONECT    8    6    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   12   16                                             
CONECT   11   10                                                            
CONECT   12   10   13   31                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16   29                                                  
CONECT   16   15   10   17   18                                             
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21   22   29                                             
CONECT   21   20                                                            
CONECT   22   20   23   24   25                                             
CONECT   23   22                                                            
CONECT   24   22                                                            
CONECT   25   22   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   15   20   30                                             
CONECT   30   29                                                            
CONECT   31   12    6   32                                                  
CONECT   32   31    2                                                       
MASTER        0    0    0    0    0    0    0    0   32    0   72    0
END

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3D PDB for NP0170104 (4,4,4a,6a,6b,8a,11,11,14b-nonamethyl-2,3,5,6,7,8,9,10,12,12a,14,14a-dodecahydro-1h-picen-3-ol)
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SMILES for NP0170104 (4,4,4a,6a,6b,8a,11,11,14b-nonamethyl-2,3,5,6,7,8,9,10,12,12a,14,14a-dodecahydro-1h-picen-3-ol)
CC1(C)CCC2(C)CCC3(C)C(=CCC4C3(C)CCC3(C)C(C)(C)C(O)CCC43C)C2C1
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INCHI for NP0170104 (4,4,4a,6a,6b,8a,11,11,14b-nonamethyl-2,3,5,6,7,8,9,10,12,12a,14,14a-dodecahydro-1h-picen-3-ol)
InChI=1S/C31H52O/c1-25(2)14-15-27(5)16-17-28(6)21(22(27)20-25)10-11-23-29(28,7)18-19-31(9)26(3,4)24(32)12-13-30(23,31)8/h10,22-24,32H,11-20H2,1-9H3
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View in JSmol
SynonymsNot Available
Chemical FormulaC31H52O
Average Mass440.7560 Da
Monoisotopic Mass440.40182 Da
IUPAC Name4,4,4a,6a,6b,8a,11,11,14b-nonamethyl-1,2,3,4,4a,5,6,6a,6b,7,8,8a,9,10,11,12,12a,14,14a,14b-icosahydropicen-3-ol
Traditional Name4,4,4a,6a,6b,8a,11,11,14b-nonamethyl-2,3,5,6,7,8,9,10,12,12a,14,14a-dodecahydro-1H-picen-3-ol
CAS Registry NumberNot Available
SMILES
CC1(C)CCC2(C)CCC3(C)C(=CCC4C3(C)CCC3(C)C(C)(C)C(O)CCC43C)C2C1
InChI Identifier
InChI=1S/C31H52O/c1-25(2)14-15-27(5)16-17-28(6)21(22(27)20-25)10-11-23-29(28,7)18-19-31(9)26(3,4)24(32)12-13-30(23,31)8/h10,22-24,32H,11-20H2,1-9H3
InChI KeyVIKGRJCBJFQYAR-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Sanvitalia procumbensLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.
KingdomOrganic compounds  
Super ClassLipids and lipid-like molecules  
ClassPrenol lipids  
Sub ClassTriterpenoids  
Direct ParentTriterpenoids  
Alternative Parents
Substituents
  • Triterpenoid
    • 

  • Cyclic alcohol
    • 

  • Secondary alcohol
    • 

  • Organic oxygen compound
    • 

  • Hydrocarbon derivative
    • 

  • Organooxygen compound
    • 

  • Alcohol
    • 

  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP8.36ALOGPS
logP7.7ChemAxon
logS-6.7ALOGPS
pKa (Strongest Acidic)19.82ChemAxon
pKa (Strongest Basic)-0.69ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area20.23 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity136.38 m³·mol⁻¹ChemAxon
Polarizability55.86 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound162850100  
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. LOTUS database [Link]