NP-MRD: Showing NP-Card for methyl (1r,2r,3s,6s,7s)-3-[(2e,5s)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate (NP0168394)

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Record Information

Version

2.0

Created at

2022-09-03 04:12:04 UTC

Updated at

2022-09-03 04:12:04 UTC

NP-MRD ID

NP0168394

Secondary Accession Numbers

None

Natural Product Identification

Common Name

methyl (1r,2r,3s,6s,7s)-3-[(2e,5s)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate

Description

Methyl (1R,2R,3S,6S,7S)-3-[(2E,5S)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]Decane-2-carboxylate belongs to the class of organic compounds known as dicarboxylic acids and derivatives. These are organic compounds containing exactly two carboxylic acid groups. methyl (1r,2r,3s,6s,7s)-3-[(2e,5s)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate is found in Xenia umbellata. Based on a literature review very few articles have been published on methyl (1R,2R,3S,6S,7S)-3-[(2E,5S)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]Decane-2-carboxylate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309032206122D          

 31 32  0  0  1  0            999 V2000
    2.8110   -2.2198    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3985   -1.5053    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8110   -0.7908    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6360   -0.7908    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3985   -0.0764    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.9288    0.5556    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7041    0.2735    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3361    0.8038    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1928    1.6162    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8248    2.1465    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.6001    1.8644    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6815    2.9590    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5383    3.7715    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8691    2.8157    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4940    3.1023    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8474   -0.5390    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6226   -0.8212    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2546   -0.2909    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1113    0.5216    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0298   -0.5730    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9288    1.3806    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3985    2.0126    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5861    2.1559    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4428    2.9683    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8830    0.9681    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5861   -0.2196    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4428   -1.0321    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8716    0.1929    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5894    0.9681    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8716    1.7434    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2396    2.2737    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  5  3  1  1  0  0  0
  5  6  1  0  0  0  0
  6  7  1  6  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  1  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 12 14  1  0  0  0  0
 12 15  1  0  0  0  0
  7 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  2  0  0  0  0
  6 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  6  0  0  0
 23 25  1  0  0  0  0
 25 26  1  0  0  0  0
  5 26  1  0  0  0  0
 26 27  1  6  0  0  0
 26 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 23 30  1  0  0  0  0
 30 31  1  6  0  0  0
M  END

     RDKit          3D

 69 70  0  0  0  0  0  0  0  0999 V2000
   -0.3172   -1.8069    4.3238 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4811   -1.9155    2.9261 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3838   -0.8203    2.0713 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1390    0.2854    2.6170 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5666   -0.9820    0.6010 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2390    0.2894   -0.0698 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8107    1.1678    0.3923 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9597    0.7969    0.8428 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4505   -0.5550    0.9760 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8209   -0.5415    0.2117 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.6163   -0.1933   -1.1140 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.4367   -1.9020    0.2633 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7463   -2.3251    1.6892 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6931   -1.8590   -0.5802 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5800   -2.8231   -0.3403 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5937    2.7011    0.3640 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3558    3.0985   -0.9512 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1237    4.3886   -1.3317 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1314    4.8352   -2.7220 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1238    5.2850   -0.4343 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5617    0.3919   -1.5362 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9414    0.9270   -1.8001 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9993   -0.0769   -1.5351 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.6180   -0.4457   -2.8935 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5695   -1.3528   -0.9133 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0690   -1.3030    0.4789 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.1527   -2.6330    0.9724 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9369   -0.4710    1.3469 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2618   -0.1618    0.6329 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0421    0.5705   -0.6464 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.2250    0.6628   -1.3584 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3389   -1.9867    4.7688 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0018   -0.8186    4.6610 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3983   -2.5529    4.7223 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0860   -1.8953    0.2825 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1804    0.9208    0.3470 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7008    1.5836    1.1842 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7901   -0.7657    2.0346 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9587   -1.3795    0.5116 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5003    0.1823    0.6585 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1975    0.5291   -1.4344 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9239   -2.9079    2.1193 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7046   -2.8766    1.6672 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9493   -1.4003    2.2933 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3631   -1.6106   -1.6174 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3675   -1.0334   -0.2553 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2239   -2.8325   -0.6002 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1036   -2.4645   -1.1080 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4710    3.2352    0.7481 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2361    2.8766    1.0594 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1820    4.0886   -3.4791 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4699    5.7532   -2.9349 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2063    5.0563   -2.8979 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4949   -0.5710   -2.0728 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2219    1.0372   -2.0282 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9380    1.2860   -2.8731 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0746    1.8722   -1.2181 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4901    0.3860   -3.6158 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6843   -0.6594   -2.7859 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0375   -1.3047   -3.3255 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8946   -1.9635   -1.5845 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5015   -2.0027   -0.8812 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7241   -2.7059    1.7521 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4982    0.4358    1.7718 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2858   -1.0486    2.2605 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7611   -1.1368    0.5081 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8298    0.4727    1.3282 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7544    1.6267   -0.3673 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1839    1.3428   -2.0824 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  6 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  1  6
 23 25  1  0
 25 26  1  0
 26 27  1  1
 26 28  1  0
 28 29  1  0
 29 30  1  0
 30 31  1  0
  6  7  1  0
  7 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 18 20  2  0
  7  8  2  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 10 12  1  0
 12 13  1  0
 12 14  1  0
 12 15  1  0
 26  5  1  0
 30 23  1  0
  1 32  1  0
  1 33  1  0
  1 34  1  0
  5 35  1  6
  6 36  1  1
 21 54  1  0
 21 55  1  0
 22 56  1  0
 22 57  1  0
 24 58  1  0
 24 59  1  0
 24 60  1  0
 25 61  1  0
 25 62  1  0
 27 63  1  0
 28 64  1  0
 28 65  1  0
 29 66  1  0
 29 67  1  0
 30 68  1  1
 31 69  1  0
 16 49  1  0
 16 50  1  0
 19 51  1  0
 19 52  1  0
 19 53  1  0
  8 37  1  0
  9 38  1  0
  9 39  1  0
 10 40  1  1
 11 41  1  0
 13 42  1  0
 13 43  1  0
 13 44  1  0
 14 45  1  0
 14 46  1  0
 14 47  1  0
 15 48  1  0
M  END


  Mrv1652309032206122D          

 31 32  0  0  1  0            999 V2000
    2.8110   -2.2198    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3985   -1.5053    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8110   -0.7908    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6360   -0.7908    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3985   -0.0764    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.9288    0.5556    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7041    0.2735    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3361    0.8038    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1928    1.6162    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8248    2.1465    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.6001    1.8644    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6815    2.9590    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5383    3.7715    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8691    2.8157    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4940    3.1023    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8474   -0.5390    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6226   -0.8212    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2546   -0.2909    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1113    0.5216    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0298   -0.5730    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9288    1.3806    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3985    2.0126    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5861    2.1559    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4428    2.9683    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8830    0.9681    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5861   -0.2196    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4428   -1.0321    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8716    0.1929    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5894    0.9681    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8716    1.7434    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2396    2.2737    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  5  3  1  1  0  0  0
  5  6  1  0  0  0  0
  6  7  1  6  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  1  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 12 14  1  0  0  0  0
 12 15  1  0  0  0  0
  7 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  2  0  0  0  0
  6 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  6  0  0  0
 23 25  1  0  0  0  0
 25 26  1  0  0  0  0
  5 26  1  0  0  0  0
 26 27  1  6  0  0  0
 26 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 23 30  1  0  0  0  0
 30 31  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0168394

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(=O)[C@@H]1[C@H](CC[C@@]2(C)C[C@]1(O)CC[C@@H]2O)C(\COC(C)=O)=C/C[C@H](O)C(C)(C)O

> <INCHI_IDENTIFIER>
InChI=1S/C23H38O8/c1-14(24)31-12-15(6-7-17(25)21(2,3)28)16-8-10-22(4)13-23(29,11-9-18(22)26)19(16)20(27)30-5/h6,16-19,25-26,28-29H,7-13H2,1-5H3/b15-6-/t16-,17+,18+,19+,22+,23-/m1/s1

> <INCHI_KEY>
YFLWESDPLOQEEL-OOEDUYDMSA-N

> <FORMULA>
C23H38O8

> <MOLECULAR_WEIGHT>
442.549

> <EXACT_MASS>
442.256668184

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
69

> <JCHEM_AVERAGE_POLARIZABILITY>
47.498451428644444

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl (1R,2R,3S,6S,7S)-3-[(2E,5S)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate

> <ALOGPS_LOGP>
1.02

> <JCHEM_LOGP>
0.23809356166666523

> <ALOGPS_LOGS>
-2.99

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.223034537154604

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.630123821253019

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9291595129698385

> <JCHEM_POLAR_SURFACE_AREA>
133.52

> <JCHEM_REFRACTIVITY>
114.25529999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.50e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
methyl (1R,2R,3S,6S,7S)-3-[(2E,5S)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 03-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   03-SEP-22         0                                  
HETATM    1  C   UNK     0       5.247  -4.144   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       4.477  -2.810   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       5.247  -1.476   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       6.787  -1.476   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       4.477  -0.143   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       5.467   1.037   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       6.914   0.510   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       8.094   1.500   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       7.827   3.017   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       9.006   4.007   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0      10.453   3.480   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0       8.739   5.523   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       8.471   7.040   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       7.222   5.256   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0      10.255   5.791   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       7.182  -1.006   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       8.629  -1.533   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       9.809  -0.543   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       9.541   0.974   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0      11.256  -1.070   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       5.467   2.577   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       4.477   3.757   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       2.961   4.024   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       2.693   5.541   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       3.515   1.807   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       2.961  -0.410   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       2.693  -1.927   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0       1.627   0.360   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       1.100   1.807   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       1.627   3.254   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0       0.447   4.244   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6   26                                                  
CONECT    6    5    7   21                                                  
CONECT    7    6    8   16                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13   14   15                                             
CONECT   13   12                                                            
CONECT   14   12                                                            
CONECT   15   12                                                            
CONECT   16    7   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18                                                            
CONECT   21    6   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24   25   30                                             
CONECT   24   23                                                            
CONECT   25   23   26                                                       
CONECT   26   25    5   27   28                                             
CONECT   27   26                                                            
CONECT   28   26   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   23   31                                                  
CONECT   31   30                                                            
MASTER        0    0    0    0    0    0    0    0   31    0   64    0
END

View in JSmol

Synonyms

Value	Source
Methyl (1R,2R,3S,6S,7S)-3-[(2E,5S)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylic acid	Generator

Chemical Formula

C₂₃H₃₈O₈

Average Mass

442.5490 Da

Monoisotopic Mass

442.25667 Da

IUPAC Name

methyl (1R,2R,3S,6S,7S)-3-[(2E,5S)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate

Traditional Name

methyl (1R,2R,3S,6S,7S)-3-[(2E,5S)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate

CAS Registry Number

Not Available

SMILES

COC(=O)[C@@H]1[C@H](CC[C@@]2(C)C[C@]1(O)CC[C@@H]2O)C(\COC(C)=O)=C/C[C@H](O)C(C)(C)O

InChI Identifier

InChI=1S/C23H38O8/c1-14(24)31-12-15(6-7-17(25)21(2,3)28)16-8-10-22(4)13-23(29,11-9-18(22)26)19(16)20(27)30-5/h6,16-19,25-26,28-29H,7-13H2,1-5H3/b15-6-/t16-,17+,18+,19+,22+,23-/m1/s1

InChI Key

YFLWESDPLOQEEL-OOEDUYDMSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Xenia umbellata	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as dicarboxylic acids and derivatives. These are organic compounds containing exactly two carboxylic acid groups.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Carboxylic acids and derivatives

Sub Class

Dicarboxylic acids and derivatives

Direct Parent

Dicarboxylic acids and derivatives

Alternative Parents

Substituents

Dicarboxylic acid or derivatives
Methyl ester
Tertiary alcohol
Cyclic alcohol
Secondary alcohol
Carboxylic acid ester
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Alcohol
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.02	ALOGPS
logP	0.24	ChemAxon
logS	-3	ALOGPS
pKa (Strongest Acidic)	13.63	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	133.52 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	114.26 m³·mol⁻¹	ChemAxon
Polarizability	47.5 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162903766

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for methyl (1r,2r,3s,6s,7s)-3-[(2e,5s)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate (NP0168394)

MOL for NP0168394 (methyl (1r,2r,3s,6s,7s)-3-[(2e,5s)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate)

3D MOL for NP0168394 (methyl (1r,2r,3s,6s,7s)-3-[(2e,5s)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate)

3D SDF for NP0168394 (methyl (1r,2r,3s,6s,7s)-3-[(2e,5s)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate)

3D-SDF for NP0168394 (methyl (1r,2r,3s,6s,7s)-3-[(2e,5s)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate)

PDB for NP0168394 (methyl (1r,2r,3s,6s,7s)-3-[(2e,5s)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate)

3D PDB for NP0168394 (methyl (1r,2r,3s,6s,7s)-3-[(2e,5s)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate)

SMILES for NP0168394 (methyl (1r,2r,3s,6s,7s)-3-[(2e,5s)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate)

INCHI for NP0168394 (methyl (1r,2r,3s,6s,7s)-3-[(2e,5s)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate)

Structure for NP0168394 (methyl (1r,2r,3s,6s,7s)-3-[(2e,5s)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate)

3D Structure for NP0168394 (methyl (1r,2r,3s,6s,7s)-3-[(2e,5s)-1-(acetyloxy)-5,6-dihydroxy-6-methylhept-2-en-2-yl]-1,7-dihydroxy-6-methylbicyclo[4.3.1]decane-2-carboxylate)