NP-MRD: Showing NP-Card for 4-{[(5s,8s,9s,10r)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid (NP0168252)

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Record Information

Version

2.0

Created at

2022-09-03 04:00:30 UTC

Updated at

2022-09-03 04:00:30 UTC

NP-MRD ID

NP0168252

Secondary Accession Numbers

None

Natural Product Identification

Common Name

4-{[(5s,8s,9s,10r)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid

Description

Xyolide belongs to the class of organic compounds known as tricarboxylic acids and derivatives. These are carboxylic acids containing exactly three carboxyl groups. 4-{[(5s,8s,9s,10r)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid is found in Xylaria feejeensis. 4-{[(5s,8s,9s,10r)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid was first documented in 2013 (PMID: 23913990). Based on a literature review very few articles have been published on Xyolide.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309032206002D          

 28 28  0  0  1  0            999 V2000
   -3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0000   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.0000    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    1.2375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1434    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    3.3000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.9139    0.6674    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  8  7  1  1  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  6  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 20 22  1  0  0  0  0
 14 23  1  0  0  0  0
 23 24  2  3  0  0  0
 24 25  1  0  0  0  0
 25 26  1  6  0  0  0
 25 27  1  0  0  0  0
  8 27  1  0  0  0  0
 27 28  1  1  0  0  0
M  END

     RDKit          3D

 60 60  0  0  0  0  0  0  0  0999 V2000
    6.5831    2.0065    1.4208 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3852    1.2855    0.1149 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6774   -0.0327    0.3530 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3419    0.2332    0.9824 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5594   -1.0242    1.2632 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2674   -1.8297    0.0272 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4718   -1.0913   -0.9881 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0834   -0.6571   -0.4915 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5298    0.0263   -1.5816 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0246    1.2756   -1.6742 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1250    1.9331   -2.7395 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4104    1.9920   -0.4516 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4507    1.2517    0.3611 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5715    0.7565   -0.5008 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.5817    0.0977    0.1858 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8725    0.5784    0.3088 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1213    1.6653   -0.2347 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8448   -0.2369    1.0731 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2097    0.4442    1.1045 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7328    0.6250   -0.2818 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8525    1.1733   -0.4395 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0444    0.2180   -1.4016 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1443   -0.0444   -1.6574 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5185   -1.2002   -1.6675 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0743   -2.0127   -0.5231 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.9963   -1.9483    0.5552 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3198   -1.8595   -0.0669 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2948   -1.9591    1.3508 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7132    2.6316    1.6800 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8016    1.2517    2.2148 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5050    2.6389    1.3337 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3553    1.1118   -0.3810 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7583    1.9456   -0.5289 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5321   -0.4727   -0.6644 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3104   -0.6556    0.9884 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7856    0.9210    0.3040 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5004    0.7390    1.9542 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6689   -0.7576    1.8430 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1937   -1.6348    1.9430 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8164   -2.7967    0.3437 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2670   -2.0417   -0.4516 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3391   -1.6440   -1.9295 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0586   -0.1705   -1.2639 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2916   -0.0307    0.3979 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4666    2.2731    0.1863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8767    2.9958   -0.6902 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9063    2.0430    1.0312 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9517    0.5239    0.9857 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0446    1.7065   -0.8972 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0305   -1.2221    0.5528 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5233   -0.4893    2.0838 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1720    1.4315    1.5954 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9097   -0.2206    1.6387 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0807    0.7273   -2.2842 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3846    0.3837   -2.6525 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2858   -1.6278   -2.6690 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2121   -3.0991   -0.8502 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7661   -2.5122    0.3919 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9155   -2.7841   -0.3446 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1233   -2.8310    1.5619 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
 10 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  2  0
 16 18  1  0
 18 19  1  0
 19 20  1  0
 20 22  1  0
 20 21  2  0
 14 23  1  0
 23 24  2  0
 24 25  1  0
 25 26  1  0
 25 27  1  0
 27 28  1  0
 27  8  1  0
  1 29  1  0
  1 30  1  0
  1 31  1  0
  2 32  1  0
  2 33  1  0
  3 34  1  0
  3 35  1  0
  4 36  1  0
  4 37  1  0
  5 38  1  0
  5 39  1  0
  6 40  1  0
  6 41  1  0
  7 42  1  0
  7 43  1  0
  8 44  1  1
 12 45  1  0
 12 46  1  0
 13 47  1  0
 13 48  1  0
 14 49  1  6
 18 50  1  0
 18 51  1  0
 19 52  1  0
 19 53  1  0
 22 54  1  0
 23 55  1  0
 24 56  1  0
 25 57  1  6
 26 58  1  0
 27 59  1  6
 28 60  1  0
M  END


  Mrv1652309032206002D          

 28 28  0  0  1  0            999 V2000
   -3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0000   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.0000    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    1.2375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1434    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    3.3000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.9139    0.6674    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  8  7  1  1  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  6  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  2  0  0  0  0
 20 22  1  0  0  0  0
 14 23  1  0  0  0  0
 23 24  2  3  0  0  0
 24 25  1  0  0  0  0
 25 26  1  6  0  0  0
 25 27  1  0  0  0  0
  8 27  1  0  0  0  0
 27 28  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0168252

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCCCCCC[C@H]1OC(=O)CC[C@H](OC(=O)CCC(O)=O)C=C[C@H](O)[C@@H]1O

> <INCHI_IDENTIFIER>
InChI=1S/C20H32O8/c1-2-3-4-5-6-7-16-20(26)15(21)10-8-14(9-12-19(25)28-16)27-18(24)13-11-17(22)23/h8,10,14-16,20-21,26H,2-7,9,11-13H2,1H3,(H,22,23)/t14-,15+,16-,20+/m1/s1

> <INCHI_KEY>
OUOHBCJNWADUGG-ASKKUZCQSA-N

> <FORMULA>
C20H32O8

> <MOLECULAR_WEIGHT>
400.468

> <EXACT_MASS>
400.20971799

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
60

> <JCHEM_AVERAGE_POLARIZABILITY>
43.435569133297925

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
4-{[(5S,8S,9S,10R)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydro-2H-oxecin-5-yl]oxy}-4-oxobutanoic acid

> <ALOGPS_LOGP>
2.39

> <JCHEM_LOGP>
2.213691055

> <ALOGPS_LOGS>
-3.01

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
13.046871518835715

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.8521936250657856

> <JCHEM_PKA_STRONGEST_BASIC>
-3.3474915667115406

> <JCHEM_POLAR_SURFACE_AREA>
130.35999999999999

> <JCHEM_REFRACTIVITY>
100.50679999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
11

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.93e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
4-{[(5S,8S,9S,10R)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 03-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   03-SEP-22         0                                  
HETATM    1  C   UNK     0      -6.668  -2.310   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -5.335  -3.080   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -4.001  -2.310   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -2.667  -3.080   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.000  -3.080   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0      -0.000   0.000   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0      -0.000   1.540   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0      -1.334   2.310   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       4.001   2.310   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       4.001   3.850   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       5.335   4.620   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       5.335   6.160   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       6.668   3.850   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       8.002   4.620   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       9.336   3.850   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0      10.669   4.620   0.000  0.00  0.00           O+0
HETATM   22  O   UNK     0       9.336   2.310   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0       5.335   1.540   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       4.001  -2.310   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       3.573   1.246   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   27                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15   23                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20                                                            
CONECT   23   14   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25    8   28                                                  
CONECT   28   27                                                            
MASTER        0    0    0    0    0    0    0    0   28    0   56    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₃₂O₈

Average Mass

400.4680 Da

Monoisotopic Mass

400.20972 Da

IUPAC Name

4-{[(5S,8S,9S,10R)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydro-2H-oxecin-5-yl]oxy}-4-oxobutanoic acid

Traditional Name

4-{[(5S,8S,9S,10R)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid

CAS Registry Number

Not Available

SMILES

CCCCCCC[C@H]1OC(=O)CC[C@H](OC(=O)CCC(O)=O)C=C[C@H](O)[C@@H]1O

InChI Identifier

InChI=1S/C20H32O8/c1-2-3-4-5-6-7-16-20(26)15(21)10-8-14(9-12-19(25)28-16)27-18(24)13-11-17(22)23/h8,10,14-16,20-21,26H,2-7,9,11-13H2,1H3,(H,22,23)/t14-,15+,16-,20+/m1/s1

InChI Key

OUOHBCJNWADUGG-ASKKUZCQSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Xylaria feejeensis	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as tricarboxylic acids and derivatives. These are carboxylic acids containing exactly three carboxyl groups.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Carboxylic acids and derivatives

Sub Class

Tricarboxylic acids and derivatives

Direct Parent

Tricarboxylic acids and derivatives

Alternative Parents

Substituents

Tricarboxylic acid or derivatives
Oxocin
Fatty acid ester
Fatty acyl
Secondary alcohol
Lactone
Carboxylic acid ester
1,2-diol
Oxacycle
Organoheterocyclic compound
Carboxylic acid
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Alcohol
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.39	ALOGPS
logP	2.21	ChemAxon
logS	-3	ALOGPS
pKa (Strongest Acidic)	3.85	ChemAxon
pKa (Strongest Basic)	-3.3	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	130.36 Å²	ChemAxon
Rotatable Bond Count	11	ChemAxon
Refractivity	100.51 m³·mol⁻¹	ChemAxon
Polarizability	43.44 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139586611

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Baraban EG, Morin JB, Phillips GM, Phillips AJ, Strobel SA, Handelsman J: Xyolide, a bioactive nonenolide from an Amazonian endophytic fungus, Xylaria feejeensis. Tetrahedron Lett. 2013 Jul 31;54(31):4058-4060. doi: 10.1016/j.tetlet.2013.05.093. [PubMed:23913990 ]
LOTUS database [Link]

Showing NP-Card for 4-{[(5s,8s,9s,10r)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid (NP0168252)

MOL for NP0168252 (4-{[(5s,8s,9s,10r)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid)

3D MOL for NP0168252 (4-{[(5s,8s,9s,10r)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid)

3D SDF for NP0168252 (4-{[(5s,8s,9s,10r)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid)

3D-SDF for NP0168252 (4-{[(5s,8s,9s,10r)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid)

PDB for NP0168252 (4-{[(5s,8s,9s,10r)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid)

3D PDB for NP0168252 (4-{[(5s,8s,9s,10r)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid)

SMILES for NP0168252 (4-{[(5s,8s,9s,10r)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid)

INCHI for NP0168252 (4-{[(5s,8s,9s,10r)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid)

Structure for NP0168252 (4-{[(5s,8s,9s,10r)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid)

3D Structure for NP0168252 (4-{[(5s,8s,9s,10r)-10-heptyl-8,9-dihydroxy-2-oxo-3,4,5,8,9,10-hexahydrooxecin-5-yl]oxy}-4-oxobutanoic acid)