NP-MRD: Showing NP-Card for (3as,9as,9bs)-6,9-dimethyl-3-methylidene-8-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3ah,4h,5h,9ah,9bh-azuleno[4,5-b]furan-2,7-dione (NP0168202)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-03 03:56:26 UTC

Updated at

2022-09-03 03:56:27 UTC

NP-MRD ID

NP0168202

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(3as,9as,9bs)-6,9-dimethyl-3-methylidene-8-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3ah,4h,5h,9ah,9bh-azuleno[4,5-b]furan-2,7-dione

Description

Ixerin Z belongs to the class of organic compounds known as o-glycosyl compounds. These are glycoside in which a sugar group is bonded through one carbon to another group via a O-glycosidic bond. (3as,9as,9bs)-6,9-dimethyl-3-methylidene-8-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3ah,4h,5h,9ah,9bh-azuleno[4,5-b]furan-2,7-dione was first documented in 2007 (PMID: 17221918). Based on a literature review a small amount of articles have been published on Ixerin Z (PMID: 25636166) (PMID: 20799274) (PMID: 19431008).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309032205562D          

 30 33  0  0  1  0            999 V2000
    5.6412   -1.0466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9527   -0.5921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9157    0.2321    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5607    0.7464    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1204    0.4515    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6659   -0.2370    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.1803   -0.8820    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9967   -1.6863    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2534   -2.0443    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5101   -1.6863    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8651   -2.2007    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3265   -0.8820    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5541   -0.5921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8656   -1.0466    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5912    0.2321    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9461    0.7464    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0691    1.5622    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8371    1.8636    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9600    2.6794    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7280    2.9808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3730    2.4665    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3150    3.1938    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4380    4.0096    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5471    2.8924    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.0980    3.4068    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4241    2.0766    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3439    1.7752    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3864    0.4515    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6763    1.2239    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8409   -0.2370    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  6  5  1  1  0  0  0
  6  7  1  0  0  0  0
  7  2  1  6  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 10 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 17 16  1  1  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  1  0  0  0
 20 21  1  0  0  0  0
 19 22  1  0  0  0  0
 22 23  1  6  0  0  0
 22 24  1  0  0  0  0
 24 25  1  1  0  0  0
 24 26  1  0  0  0  0
 17 26  1  0  0  0  0
 26 27  1  6  0  0  0
 15 28  2  0  0  0  0
 28 29  1  0  0  0  0
 30 28  1  6  0  0  0
 12 30  1  0  0  0  0
  6 30  1  0  0  0  0
M  END

     RDKit          3D

 56 59  0  0  0  0  0  0  0  0999 V2000
   -5.6499    2.4042   -0.2695 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4669    1.9960   -0.6556 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2594    2.8177   -0.8076 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1480    4.0730   -0.7297 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1739    1.9430   -1.0702 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5730    0.7231   -0.5306 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.0053    0.6440   -1.0395 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.8004   -0.4963   -0.5952 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4966   -1.1488    0.7003 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1339   -1.7213    0.8244 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9867   -2.7297    1.9057 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0193   -1.4865    0.1701 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6966   -2.0567    0.3514 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4175   -2.9925    1.1650 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2149   -1.3546   -0.5647 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5645   -1.6333   -0.6460 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5691   -0.6886   -0.3346 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.8405   -1.1922   -0.4890 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7513   -0.1607   -0.4331 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.1700   -0.7252   -0.5823 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0215    0.3903   -0.5136 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7246    0.6244    0.8354 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.5460    1.7473    0.6551 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3188    1.0505    1.1856 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.2424    1.6514    2.4181 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4544   -0.2098    1.1152 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1442    0.0476    1.4720 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4561   -0.4409   -1.2622 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1751    0.4494   -2.2602 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8786   -0.4977   -0.9595 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.8600    3.4337   -0.0138 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4991    1.7285   -0.1817 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5542    0.8043    0.5796 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9171    0.6664   -2.1562 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7058   -1.3069   -1.3840 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8905   -0.2500   -0.5979 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7682   -0.5319    1.5855 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1914   -2.0391    0.7737 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6198   -3.7087    1.5026 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2773   -2.3397    2.6650 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9480   -2.8982    2.4318 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4495    0.1967   -0.9623 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5712    0.4991   -1.3204 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3688   -1.3110    0.3395 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2934   -1.2859   -1.5107 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.9633    0.1445   -0.6394 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1533   -0.0211    1.6470 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4143    2.1086   -0.2714 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9706    1.7094    0.3554 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0473    2.2550    2.4926 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9427   -0.9526    1.7717 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9981    1.0170    1.6904 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5339    1.3971   -1.8388 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5861    0.7242   -3.0358 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9747   -0.0895   -2.8338 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4386   -0.9768   -1.8306 H   0  0  0  0  0  0  0  0  0  0  0  0
 29 28  1  0
 28 15  2  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 19 22  1  0
 22 23  1  0
 22 24  1  0
 24 25  1  0
 24 26  1  0
 26 27  1  0
 15 13  1  0
 13 14  2  0
 13 12  1  0
 12 10  2  0
 10 11  1  0
 10  9  1  0
  9  8  1  0
  8  7  1  0
  7  6  1  0
  6  5  1  0
  5  3  1  0
  3  4  2  0
  3  2  1  0
  2  1  2  3
  6 30  1  0
 30 28  1  0
 26 17  1  0
 30 12  1  0
  2  7  1  0
 29 53  1  0
 29 54  1  0
 29 55  1  0
 17 42  1  6
 19 43  1  6
 20 44  1  0
 20 45  1  0
 21 46  1  0
 22 47  1  1
 23 48  1  0
 24 49  1  6
 25 50  1  0
 26 51  1  1
 27 52  1  0
 11 39  1  0
 11 40  1  0
 11 41  1  0
  9 37  1  0
  9 38  1  0
  8 35  1  0
  8 36  1  0
  7 34  1  6
  6 33  1  1
  1 31  1  0
  1 32  1  0
 30 56  1  6
M  END


  Mrv1652309032205562D          

 30 33  0  0  1  0            999 V2000
    5.6412   -1.0466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9527   -0.5921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9157    0.2321    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5607    0.7464    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1204    0.4515    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6659   -0.2370    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.1803   -0.8820    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9967   -1.6863    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2534   -2.0443    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5101   -1.6863    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8651   -2.2007    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3265   -0.8820    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5541   -0.5921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8656   -1.0466    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5912    0.2321    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9461    0.7464    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0691    1.5622    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8371    1.8636    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9600    2.6794    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7280    2.9808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3730    2.4665    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3150    3.1938    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4380    4.0096    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5471    2.8924    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.0980    3.4068    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4241    2.0766    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3439    1.7752    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3864    0.4515    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6763    1.2239    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8409   -0.2370    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  6  5  1  1  0  0  0
  6  7  1  0  0  0  0
  7  2  1  6  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 10 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 17 16  1  1  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  1  0  0  0
 20 21  1  0  0  0  0
 19 22  1  0  0  0  0
 22 23  1  6  0  0  0
 22 24  1  0  0  0  0
 24 25  1  1  0  0  0
 24 26  1  0  0  0  0
 17 26  1  0  0  0  0
 26 27  1  6  0  0  0
 15 28  2  0  0  0  0
 28 29  1  0  0  0  0
 30 28  1  6  0  0  0
 12 30  1  0  0  0  0
  6 30  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0168202

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC1=C(O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)C(=O)C2=C(C)CC[C@@H]3[C@H](OC(=O)C3=C)[C@@H]12

> <INCHI_IDENTIFIER>
InChI=1S/C21H26O9/c1-7-4-5-10-8(2)20(27)29-19(10)13-9(3)18(15(24)12(7)13)30-21-17(26)16(25)14(23)11(6-22)28-21/h10-11,13-14,16-17,19,21-23,25-26H,2,4-6H2,1,3H3/t10-,11+,13-,14+,16-,17+,19-,21-/m0/s1

> <INCHI_KEY>
DLWWWKUZFJQXQX-XRKRTLBJSA-N

> <FORMULA>
C21H26O9

> <MOLECULAR_WEIGHT>
422.43

> <EXACT_MASS>
422.157682417

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
56

> <JCHEM_AVERAGE_POLARIZABILITY>
42.82260096297433

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(3aS,9aS,9bS)-6,9-dimethyl-3-methylidene-8-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-2H,3H,3aH,4H,5H,7H,9aH,9bH-azuleno[4,5-b]furan-2,7-dione

> <ALOGPS_LOGP>
-0.36

> <JCHEM_LOGP>
-0.21160060433333389

> <ALOGPS_LOGS>
-2.02

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.196022524131621

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.199958509614303

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9810923596962606

> <JCHEM_POLAR_SURFACE_AREA>
142.75000000000003

> <JCHEM_REFRACTIVITY>
102.90040000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.06e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(3aS,9aS,9bS)-6,9-dimethyl-3-methylidene-8-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3aH,4H,5H,9aH,9bH-azuleno[4,5-b]furan-2,7-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 03-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   03-SEP-22         0                                  
HETATM    1  C   UNK     0      10.530  -1.954   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       9.245  -1.105   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       9.176   0.433   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      10.380   1.393   0.000  0.00  0.00           O+0
HETATM    5  O   UNK     0       7.691   0.843   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0       6.843  -0.442   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       7.803  -1.646   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       7.461  -3.148   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       6.073  -3.816   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.686  -3.148   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       3.482  -4.108   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       4.343  -1.646   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.901  -1.105   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       1.616  -1.954   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       2.970   0.433   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       1.766   1.393   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0       1.996   2.916   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0       3.429   3.479   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0       3.659   5.002   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       5.092   5.564   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       6.296   4.604   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       2.455   5.962   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       2.684   7.485   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       1.021   5.399   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0      -0.183   6.359   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       0.792   3.876   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0      -0.642   3.314   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0       4.455   0.843   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       4.996   2.285   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       5.303  -0.442   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    7                                                  
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6                                                       
CONECT    6    5    7   30                                                  
CONECT    7    6    2    8                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13   30                                                  
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16   28                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18   26                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20   22                                                  
CONECT   20   19   21                                                       
CONECT   21   20                                                            
CONECT   22   19   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   17   27                                                  
CONECT   27   26                                                            
CONECT   28   15   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28   12    6                                                  
MASTER        0    0    0    0    0    0    0    0   30    0   66    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₁H₂₆O₉

Average Mass

422.4300 Da

Monoisotopic Mass

422.15768 Da

IUPAC Name

(3aS,9aS,9bS)-6,9-dimethyl-3-methylidene-8-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-2H,3H,3aH,4H,5H,7H,9aH,9bH-azuleno[4,5-b]furan-2,7-dione

Traditional Name

(3aS,9aS,9bS)-6,9-dimethyl-3-methylidene-8-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3aH,4H,5H,9aH,9bH-azuleno[4,5-b]furan-2,7-dione

CAS Registry Number

Not Available

SMILES

CC1=C(O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)C(=O)C2=C(C)CC[C@@H]3[C@H](OC(=O)C3=C)[C@@H]12

InChI Identifier

InChI=1S/C21H26O9/c1-7-4-5-10-8(2)20(27)29-19(10)13-9(3)18(15(24)12(7)13)30-21-17(26)16(25)14(23)11(6-22)28-21/h10-11,13-14,16-17,19,21-23,25-26H,2,4-6H2,1,3H3/t10-,11+,13-,14+,16-,17+,19-,21-/m0/s1

InChI Key

DLWWWKUZFJQXQX-XRKRTLBJSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as o-glycosyl compounds. These are glycoside in which a sugar group is bonded through one carbon to another group via a O-glycosidic bond.

Kingdom

Organic compounds

Super Class

Organic oxygen compounds

Class

Organooxygen compounds

Sub Class

Carbohydrates and carbohydrate conjugates

Direct Parent

O-glycosyl compounds

Alternative Parents

Substituents

Hexose monosaccharide
O-glycosyl compound
Gamma butyrolactone
Monosaccharide
Oxane
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Oxolane
Carboxylic acid ester
Ketone
Lactone
Secondary alcohol
Oxacycle
Monocarboxylic acid or derivatives
Acetal
Carboxylic acid derivative
Organoheterocyclic compound
Polyol
Aldehyde
Alcohol
Hydrocarbon derivative
Organic oxide
Carbonyl group
Primary alcohol
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-0.36	ALOGPS
logP	-0.21	ChemAxon
logS	-2	ALOGPS
pKa (Strongest Acidic)	12.2	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	142.75 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	102.9 m³·mol⁻¹	ChemAxon
Polarizability	42.82 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00033978

Chemspider ID

8916226

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10740895

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Cai W, Zhang JY, Dong LY, Yin PH, Wang CG, Lu JQ, Zhang HG: Identification of the metabolites of Ixerin Z from Ixeris sonchifolia Hance in rats by HPLC-LTQ-Orbitrap mass spectrometry. J Pharm Biomed Anal. 2015 Mar 25;107:290-7. doi: 10.1016/j.jpba.2015.01.004. Epub 2015 Jan 10. [PubMed:25636166 ]
Shi P, Zhang Y, Qu H, Fan X: Systematic characterisation of secondary metabolites from Ixeris sonchifolia by the combined use of HPLC-TOFMS and HPLC-ITMS. Phytochem Anal. 2011 Jan-Feb;22(1):66-73. doi: 10.1002/pca.1253. Epub 2010 Aug 26. [PubMed:20799274 ]
Zhang YC, Zhou L, Ng KY: Sesquiterpene lactones from Ixeris sonchifolia Hance and their cytotoxicities on A549 human non-small cell lung cancer cells. J Asian Nat Prod Res. 2009;11(4):294-8. doi: 10.1080/10286020902727520. [PubMed:19431008 ]
Na Z, Cho JY, Lee HJ, Chung JH, Park KD, Lee YJ, Shin SC, Rim YS, Park KH, Moon JH: Complete 1H and 13C NMR assignments of sesquiterpene glucosides from Ixeris sonchifolia. Magn Reson Chem. 2007 Mar;45(3):275-8. doi: 10.1002/mrc.1953. [PubMed:17221918 ]
LOTUS database [Link]

Showing NP-Card for (3as,9as,9bs)-6,9-dimethyl-3-methylidene-8-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3ah,4h,5h,9ah,9bh-azuleno[4,5-b]furan-2,7-dione (NP0168202)

MOL for NP0168202 ((3as,9as,9bs)-6,9-dimethyl-3-methylidene-8-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3ah,4h,5h,9ah,9bh-azuleno[4,5-b]furan-2,7-dione)

3D MOL for NP0168202 ((3as,9as,9bs)-6,9-dimethyl-3-methylidene-8-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3ah,4h,5h,9ah,9bh-azuleno[4,5-b]furan-2,7-dione)

3D SDF for NP0168202 ((3as,9as,9bs)-6,9-dimethyl-3-methylidene-8-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3ah,4h,5h,9ah,9bh-azuleno[4,5-b]furan-2,7-dione)

3D-SDF for NP0168202 ((3as,9as,9bs)-6,9-dimethyl-3-methylidene-8-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3ah,4h,5h,9ah,9bh-azuleno[4,5-b]furan-2,7-dione)

PDB for NP0168202 ((3as,9as,9bs)-6,9-dimethyl-3-methylidene-8-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3ah,4h,5h,9ah,9bh-azuleno[4,5-b]furan-2,7-dione)

3D PDB for NP0168202 ((3as,9as,9bs)-6,9-dimethyl-3-methylidene-8-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3ah,4h,5h,9ah,9bh-azuleno[4,5-b]furan-2,7-dione)

SMILES for NP0168202 ((3as,9as,9bs)-6,9-dimethyl-3-methylidene-8-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3ah,4h,5h,9ah,9bh-azuleno[4,5-b]furan-2,7-dione)

INCHI for NP0168202 ((3as,9as,9bs)-6,9-dimethyl-3-methylidene-8-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3ah,4h,5h,9ah,9bh-azuleno[4,5-b]furan-2,7-dione)

Structure for NP0168202 ((3as,9as,9bs)-6,9-dimethyl-3-methylidene-8-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3ah,4h,5h,9ah,9bh-azuleno[4,5-b]furan-2,7-dione)

3D Structure for NP0168202 ((3as,9as,9bs)-6,9-dimethyl-3-methylidene-8-{[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3ah,4h,5h,9ah,9bh-azuleno[4,5-b]furan-2,7-dione)