| Record Information |
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| Version | 2.0 |
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| Created at | 2022-09-03 03:52:23 UTC |
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| Updated at | 2022-09-03 03:52:23 UTC |
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| NP-MRD ID | NP0168146 |
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| Secondary Accession Numbers | None |
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| Natural Product Identification |
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| Common Name | pyrophosphomevalonate |
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| Description | (R)-5-Diphosphomevalonic acid, also known as mevalonate 5-diphosphate or mevalonic acid 5-pyrophosphate, belongs to the class of organic compounds known as organic pyrophosphates. These are organic compounds containing the pyrophosphate oxoanion, with the structure OP([O-])(=O)OP(O)([O-])=O (R)-5-Diphosphomevalonic acid is a very hydrophobic molecule, practically insoluble (in water), and relatively neutral (R)-5-Diphosphomevalonic acid exists in all living species, ranging from bacteria to humans. In humans, (R)-5-diphosphomevalonic acid is involved in the metabolic disorder called the cholesteryl ester storage disease pathway. Outside of the human body, (R)-5-Diphosphomevalonic acid has been detected, but not quantified in, several different foods, such as pepper (c. Pubescens), common pea, small-leaf lindens, chia, and sunflowers. This could make (R)-5-diphosphomevalonic acid a potential biomarker for the consumption of these foods. pyrophosphomevalonate is found in Apis cerana, Homo sapiens and Mus musculus. pyrophosphomevalonate was first documented in 1981 (PMID: 6263908). 5-Diphosphomevalonic acid (CAS: 1492-08-6) Is a metabolic intermediate in the mevalonate pathway, catalyzed by the enzyme phosphomevalonate kinase from 5-phosphomevalonate (Wikipedia) (PMID: 15994924) (PMID: 9600263) (PMID: 12646231) (PMID: 8626466). |
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| Structure | C[C@@](O)(CCOP(O)(=O)OP(O)(O)=O)CC(O)=O InChI=1S/C6H14O10P2/c1-6(9,4-5(7)8)2-3-15-18(13,14)16-17(10,11)12/h9H,2-4H2,1H3,(H,7,8)(H,13,14)(H2,10,11,12)/t6-/m1/s1 |
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| Synonyms | | Value | Source |
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| (R)-5-Diphosphomevalonate | ChEBI | | 5-Diphosphomevalonate | HMDB | | 5-Diphosphomevalonic acid | HMDB | | Mevalonate 5-diphosphate | HMDB | | Mevalonate pyrophosphate | HMDB | | Mevalonate-diphosphate | HMDB | | (3R)-3-Hydroxy-5-[[hydroxy(phosphonooxy)phosphinyl]oxy]-3-methylpentanoic acid | HMDB | | (R)-Diphosphomevalonic acid | HMDB | | 5-Pyrophosphomevalonic acid | HMDB | | Mevalonic 5-pyrophosphate | HMDB | | Mevalonic acid 5-diphosphate | HMDB | | Mevalonic acid 5-pyrophosphate | HMDB | | Mevalonic acid pyrophosphate | HMDB | | Pyrophosphomevalonic acid | HMDB | | (3R)-3-Hydroxy-5-[[hydroxy(phosphonooxy)phosphinyl]oxy]-3-methylpentanoate | HMDB | | (R)-Diphosphomevalonate | HMDB | | 5-Pyrophosphomevalonate | HMDB | | Mevalonate 5-pyrophosphate | HMDB | | Mevalonic 5-pyrophosphic acid | HMDB | | Mevalonic acid 5-diphosphic acid | HMDB | | Mevalonic acid 5-pyrophosphic acid | HMDB | | Mevalonic acid pyrophosphic acid | HMDB | | Pyrophosphomevalonate | HMDB | | (R)-5-Diphosphomevalonic acid | Generator | | R-Diphosphomevalonate | HMDB |
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| Chemical Formula | C6H14O10P2 |
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| Average Mass | 308.1169 Da |
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| Monoisotopic Mass | 308.00622 Da |
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| IUPAC Name | (3R)-3-hydroxy-5-{[hydroxy(phosphonooxy)phosphoryl]oxy}-3-methylpentanoic acid |
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| Traditional Name | mevalonate-diphosphate |
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| CAS Registry Number | Not Available |
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| SMILES | C[C@@](O)(CCOP(O)(=O)OP(O)(O)=O)CC(O)=O |
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| InChI Identifier | InChI=1S/C6H14O10P2/c1-6(9,4-5(7)8)2-3-15-18(13,14)16-17(10,11)12/h9H,2-4H2,1H3,(H,7,8)(H,13,14)(H2,10,11,12)/t6-/m1/s1 |
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| InChI Key | SIGQQUBJQXSAMW-ZCFIWIBFSA-N |
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| Experimental Spectra |
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| Not Available | | Predicted Spectra |
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| | Spectrum Type | Description | Depositor ID | Depositor Organization | Depositor | Deposition Date | View |
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| 1D NMR | 13C NMR Spectrum (1D, 25 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 100 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 252 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 50 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 200 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 75 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 300 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 101 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 400 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 126 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 500 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 151 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 600 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 176 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 700 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 201 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 800 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 226 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 900 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum |
| | Chemical Shift Submissions |
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| Not Available | | Species |
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| Species of Origin | |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as organic pyrophosphates. These are organic compounds containing the pyrophosphate oxoanion, with the structure OP([O-])(=O)OP(O)([O-])=O. |
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| Kingdom | Organic compounds |
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| Super Class | Organic oxygen compounds |
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| Class | Organic oxoanionic compounds |
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| Sub Class | Organic pyrophosphates |
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| Direct Parent | Organic pyrophosphates |
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| Alternative Parents | |
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| Substituents | - Organic pyrophosphate
- Monoalkyl phosphate
- Short-chain hydroxy acid
- Organic phosphoric acid derivative
- Fatty acid
- Alkyl phosphate
- Phosphoric acid ester
- Tertiary alcohol
- Carboxylic acid derivative
- Carboxylic acid
- Monocarboxylic acid or derivatives
- Carbonyl group
- Alcohol
- Organic oxide
- Hydrocarbon derivative
- Organooxygen compound
- Aliphatic acyclic compound
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| Molecular Framework | Aliphatic acyclic compounds |
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| External Descriptors | |
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| Physical Properties |
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| State | Not Available |
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| Experimental Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Predicted Properties | |
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