Np mrd loader

Record Information
Version1.0
Created at2022-09-03 03:39:39 UTC
Updated at2022-09-03 03:39:39 UTC
NP-MRD IDNP0167969
Secondary Accession NumbersNone
Natural Product Identification
Common Namemethyl (4z)-6-(2,5-dihydroxyphenyl)-4-methyl-6-oxohex-4-enoate
DescriptionOrirubenone F belongs to the class of organic compounds known as prenylated hydroquinones. These are quinones with a structure characterized by the hydroquinone ring substituted by an prenyl side-chain. methyl (4z)-6-(2,5-dihydroxyphenyl)-4-methyl-6-oxohex-4-enoate is found in Agaricus urinascens. It was first documented in 2003 (PMID: 36056506). Based on a literature review a significant number of articles have been published on Orirubenone F (PMID: 36057419) (PMID: 36057336) (PMID: 36057013) (PMID: 36057012) (PMID: 36056827) (PMID: 36056757).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC14H16O5
Average Mass264.2770 Da
Monoisotopic Mass264.09977 Da
IUPAC Namemethyl (4Z)-6-(2,5-dihydroxyphenyl)-4-methyl-6-oxohex-4-enoate
Traditional Namemethyl (4Z)-6-(2,5-dihydroxyphenyl)-4-methyl-6-oxohex-4-enoate
CAS Registry NumberNot Available
SMILES
COC(=O)CC\C(C)=C/C(=O)C1=CC(O)=CC=C1O
InChI Identifier
InChI=1S/C14H16O5/c1-9(3-6-14(18)19-2)7-13(17)11-8-10(15)4-5-12(11)16/h4-5,7-8,15-16H,3,6H2,1-2H3/b9-7-
InChI KeyPSSTVIMXRALZMS-CLFYSBASSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Agaricus urinascensLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as prenylated hydroquinones. These are quinones with a structure characterized by the hydroquinone ring substituted by an prenyl side-chain.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassQuinone and hydroquinone lipids
Direct ParentPrenylated hydroquinones
Alternative Parents
Substituents
  • Prenylbenzoquinol
  • Benzoyl
  • Hydroquinone
  • Aryl ketone
  • 1-hydroxy-2-unsubstituted benzenoid
  • Fatty acid ester
  • Phenol
  • Fatty acid methyl ester
  • Monocyclic benzene moiety
  • Fatty acyl
  • Benzenoid
  • Acryloyl-group
  • Enone
  • Vinylogous acid
  • Alpha,beta-unsaturated ketone
  • Methyl ester
  • Carboxylic acid ester
  • Ketone
  • Carboxylic acid derivative
  • Monocarboxylic acid or derivatives
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organic oxide
  • Carbonyl group
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.97ALOGPS
logP2.67ChemAxon
logS-3.2ALOGPS
pKa (Strongest Acidic)7.65ChemAxon
pKa (Strongest Basic)-5.9ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area83.83 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity70.66 m³·mol⁻¹ChemAxon
Polarizability26.89 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78435003
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound101765504
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Al-Moraissi EA, Christidis N, Ho YS: Publication performance and trends in temporomandibular disorders research: A bibliometric analysis. J Stomatol Oral Maxillofac Surg. 2023 Feb;124(1):101273. doi: 10.1016/j.jormas.2022.08.016. Epub 2022 Aug 31. [PubMed:36057419 ]
  2. Sherlin V A, Baby JN, Sriram B, Hsu YF, Wang SF, George M: Construction of ANbO(3) (A= Na, K)/f-carbon nanofiber composite: Rapid and real-time electrochemical detection of hydroxychloroquine in environmental samples. Environ Res. 2022 Dec;215(Pt 1):114232. doi: 10.1016/j.envres.2022.114232. Epub 2022 Aug 31. [PubMed:36057336 ]
  3. Takaya K, Asou T, Kishi K: Cathepsin F is a potential marker for senescent human skin fibroblasts and keratinocytes associated with skin aging. Geroscience. 2023 Feb;45(1):427-437. doi: 10.1007/s11357-022-00648-7. Epub 2022 Sep 3. [PubMed:36057013 ]
  4. Watanabe M, Kato H, Katayama D, Soeda F, Matsunaga K, Watabe T, Tatsumi M, Shimosegawa E, Tomiyama N: Semiquantitative analysis using whole-body dynamic F-18 fluoro-2-deoxy-glucose-positron emission tomography to differentiate between benign and malignant lesions. Ann Nucl Med. 2022 Nov;36(11):951-963. doi: 10.1007/s12149-022-01784-y. Epub 2022 Sep 3. [PubMed:36057012 ]
  5. Mota HRO, Oliveira JTA, Martins TF, Vasconcelos IM, Costa HPS, Neres DP, Silva FDA, Souza PFN: Chitinase from the Latex of Ficus benjamina L. Displays Antifungal Activity by Inducing ROS Generation and Structural Damage to the Fungal Cell Wall and Plasma Membrane. Protein Pept Lett. 2022;29(10):869-881. doi: 10.2174/0929866529666220903091107. [PubMed:36056827 ]
  6. Kharofa J, Apewokin S, Alenghat T, Ollberding NJ: Metagenomic analysis of the fecal microbiome in colorectal cancer patients compared to healthy controls as a function of age. Cancer Med. 2023 Feb;12(3):2945-2957. doi: 10.1002/cam4.5197. Epub 2022 Sep 3. [PubMed:36056757 ]
  7. Lan G, Cai Y, Li A, Liu Z, Ma S, Guo T: Association of Presynaptic Loss with Alzheimer's Disease and Cognitive Decline. Ann Neurol. 2022 Dec;92(6):1001-1015. doi: 10.1002/ana.26492. Epub 2022 Sep 15. [PubMed:36056679 ]
  8. Rabani I, Younus A, Patil S, Seo YS: Fabrication of Fe(3)O(4)-incorporated MnO(2) nanoflowers as electrodes for enhanced asymmetric supercapacitor performance. Dalton Trans. 2022 Sep 26;51(37):14190-14200. doi: 10.1039/d2dt01942f. [PubMed:36056677 ]
  9. Di Martino C, Delfine S, Pizzuto R, Loreto F, Fuggi A: Free amino acids and glycine betaine in leaf osmoregulation of spinach responding to increasing salt stress. New Phytol. 2003 Jun;158(3):455-463. doi: 10.1046/j.1469-8137.2003.00770.x. [PubMed:36056506 ]
  10. Du Y, Liu Y, Zhou Y, Zhang P: Knockdown of CDC20 promotes adipogenesis of bone marrow-derived stem cells by modulating beta-catenin. Stem Cell Res Ther. 2022 Sep 2;13(1):443. doi: 10.1186/s13287-022-03062-0. [PubMed:36056439 ]
  11. LOTUS database [Link]