NP-MRD: Showing NP-Card for 2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene (NP0166936)

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Record Information

Version

2.0

Created at

2022-09-03 02:24:46 UTC

Updated at

2022-09-03 02:24:46 UTC

NP-MRD ID

NP0166936

Secondary Accession Numbers

None

Natural Product Identification

Common Name

2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene

Description

2,6,10,14,18-Pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. 2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene is found in Rhizosolenia setigera. Based on a literature review very few articles have been published on 2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309032204242D          

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M  END

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  Mrv1652309032204242D          

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M  END
> <DATABASE_ID>
NP0166936

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(C)CCCC(C)C(CC=C(C)CCC=C(C)CCC=C(C)C)=CCC(C)C=C

> <INCHI_IDENTIFIER>
InChI=1S/C30H52/c1-10-26(6)20-22-30(29(9)19-12-15-25(4)5)23-21-28(8)18-13-17-27(7)16-11-14-24(2)3/h10,14,17,21-22,25-26,29H,1,11-13,15-16,18-20,23H2,2-9H3

> <INCHI_KEY>
BNYPZWFLESHHNE-UHFFFAOYSA-N

> <FORMULA>
C30H52

> <MOLECULAR_WEIGHT>
412.746

> <EXACT_MASS>
412.406901674

> <JCHEM_ACCEPTOR_COUNT>
0

> <JCHEM_ATOM_COUNT>
82

> <JCHEM_AVERAGE_POLARIZABILITY>
55.48775227429824

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene

> <ALOGPS_LOGP>
9.46

> <JCHEM_LOGP>
10.771632960333333

> <ALOGPS_LOGS>
-6.52

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_POLAR_SURFACE_AREA>
0.0

> <JCHEM_REFRACTIVITY>
142.9095

> <JCHEM_ROTATABLE_BOND_COUNT>
16

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.26e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 03-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   03-SEP-22         0                                  
HETATM    1  C   UNK     0       7.287   7.287   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       5.954   8.057   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       4.620   7.287   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       3.286   8.057   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.620   5.747   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       3.286   4.977   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       3.286   3.437   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.953   2.667   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.619   3.437   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.619   4.977   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.953   5.747   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -0.715   5.747   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      -0.715   7.287   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -2.048   8.057   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -2.048   9.597   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -0.715  10.367   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -3.382  10.367   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -3.382  11.907   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -4.716  12.677   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -4.716  14.217   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -6.049  14.987   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -3.382  14.987   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       4.620   2.667   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       4.620   1.127   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       5.954   3.437   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       7.287   2.667   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       8.621   3.437   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       9.955   2.667   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      11.288   3.437   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       9.955   1.127   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8   23                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20                                                            
CONECT   23    7   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28                                                            
MASTER        0    0    0    0    0    0    0    0   30    0   58    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₀H₅₂

Average Mass

412.7460 Da

Monoisotopic Mass

412.40690 Da

IUPAC Name

2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene

Traditional Name

2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene

CAS Registry Number

Not Available

SMILES

CC(C)CCCC(C)C(CC=C(C)CCC=C(C)CCC=C(C)C)=CCC(C)C=C

InChI Identifier

InChI=1S/C30H52/c1-10-26(6)20-22-30(29(9)19-12-15-25(4)5)23-21-28(8)18-13-17-27(7)16-11-14-24(2)3/h10,14,17,21-22,25-26,29H,1,11-13,15-16,18-20,23H2,2-9H3

InChI Key

BNYPZWFLESHHNE-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Rhizosolenia setigera	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Triterpenoids

Direct Parent

Triterpenoids

Alternative Parents

Substituents

Triterpenoid
Branched unsaturated hydrocarbon
Unsaturated aliphatic hydrocarbon
Unsaturated hydrocarbon
Olefin
Acyclic olefin
Hydrocarbon
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	9.46	ALOGPS
logP	10.77	ChemAxon
logS	-6.5	ALOGPS
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	0	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	0 Å²	ChemAxon
Rotatable Bond Count	16	ChemAxon
Refractivity	142.91 m³·mol⁻¹	ChemAxon
Polarizability	55.49 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

73807931

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene (NP0166936)

MOL for NP0166936 (2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene)

3D MOL for NP0166936 (2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene)

3D SDF for NP0166936 (2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene)

3D-SDF for NP0166936 (2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene)

PDB for NP0166936 (2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene)

3D PDB for NP0166936 (2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene)

SMILES for NP0166936 (2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene)

INCHI for NP0166936 (2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene)

Structure for NP0166936 (2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene)

3D Structure for NP0166936 (2,6,10,14,18-pentamethyl-13-(3-methylpent-4-en-1-ylidene)nonadeca-2,6,10-triene)