NP-MRD: Showing NP-Card for (2z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal (NP0165639)

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Record Information

Version

2.0

Created at

2022-09-03 00:50:28 UTC

Updated at

2022-09-03 00:50:28 UTC

NP-MRD ID

NP0165639

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal

Description

(Z)-3-(2,4,5-Trimethoxyphenyl)-2-propenal belongs to the class of organic compounds known as cinnamaldehydes. These are organic aromatic compounds containing a cinnamlaldehyde moiety, consisting of a benzene and an aldehyde group to form 3-phenylprop-2-enal (Z)-3-(2,4,5-Trimethoxyphenyl)-2-propenal is an extremely weak basic (essentially neutral) compound (based on its pKa). Outside of the human body, (Z)-3-(2,4,5-Trimethoxyphenyl)-2-propenal has been detected, but not quantified in, herbs and spices and root vegetables. (2z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal is found in Acorus calamus. This could make (Z)-3-(2,4,5-trimethoxyphenyl)-2-propenal a potential biomarker for the consumption of these foods.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 30 30  0  0  0  0  0  0  0  0999 V2000
   -1.9790    2.6564    0.1908 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0598    1.2526    0.3057 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8480    0.5359    0.2276 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3460    1.1927    0.0633 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5091    0.4731    0.0109 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7178    1.1236   -0.1542 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7652    2.5418   -0.2708 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5232   -0.9094    0.1190 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7515   -1.6001    0.0606 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7046   -3.0050    0.1761 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3450   -1.5793    0.2803 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8516   -0.8394    0.3318 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0519   -1.6524    0.3591 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9890   -1.5514   -0.5118 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0262   -0.6864   -1.6305 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2256    0.1237   -2.1028 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2851    3.0402    0.9677 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9471    3.1506    0.2316 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5200    2.8672   -0.8137 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3376    2.2938   -0.0230 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8145    2.8987   -0.0709 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1657    2.9742    0.5741 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3984    2.8959   -1.2450 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2845   -3.3366    1.1579 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7115   -3.4627    0.1006 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0154   -3.3950   -0.6120 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3668   -2.6535    0.3632 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1245   -2.3956    1.2023 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8692   -2.2234   -0.3658 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9798   -0.7303   -2.2313 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  5  8  2  0
  8  9  1  0
  9 10  1  0
  8 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  2  0
 12  3  1  0
  1 17  1  0
  1 18  1  0
  1 19  1  0
  4 20  1  0
  7 21  1  0
  7 22  1  0
  7 23  1  0
 10 24  1  0
 10 25  1  0
 10 26  1  0
 11 27  1  0
 13 28  1  0
 14 29  1  0
 15 30  1  0
M  END


  Mrv0541 05061310322D          

 16 16  0  0  0  0            999 V2000
   -0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  5  4  2  0  0  0  0
  6  4  1  0  0  0  0
  9  5  1  0  0  0  0
  9  7  2  0  0  0  0
 10  8  2  0  0  0  0
 10  9  1  0  0  0  0
 11  7  1  0  0  0  0
 12  8  1  0  0  0  0
 12 11  2  0  0  0  0
 13  6  2  0  0  0  0
 14  1  1  0  0  0  0
 14 10  1  0  0  0  0
 15  2  1  0  0  0  0
 15 11  1  0  0  0  0
 16  3  1  0  0  0  0
 16 12  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0165639

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC(OC)=C(OC)C=C1\C=C/C=O

> <INCHI_IDENTIFIER>
InChI=1S/C12H14O4/c1-14-10-8-12(16-3)11(15-2)7-9(10)5-4-6-13/h4-8H,1-3H3/b5-4-

> <INCHI_KEY>
DNAVOCNYHNNEQI-PLNGDYQASA-N

> <FORMULA>
C12H14O4

> <MOLECULAR_WEIGHT>
222.2372

> <EXACT_MASS>
222.089208936

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_AVERAGE_POLARIZABILITY>
23.016183475035977

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2Z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal

> <ALOGPS_LOGP>
2.17

> <JCHEM_LOGP>
1.5044562106666661

> <ALOGPS_LOGS>
-3.41

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-4.235817844399912

> <JCHEM_POLAR_SURFACE_AREA>
44.760000000000005

> <JCHEM_REFRACTIVITY>
61.52410000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
8.69e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2Z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0      -1.334   3.850   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.667   4.620   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.334   3.850   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       4.001   3.850   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.000   0.000   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0       5.335   4.620   0.000  0.00  0.00           O+0
HETATM   14  O   UNK     0      -1.334   2.310   0.000  0.00  0.00           O+0
HETATM   15  O   UNK     0       4.001  -0.770   0.000  0.00  0.00           O+0
HETATM   16  O   UNK     0       1.334  -2.310   0.000  0.00  0.00           O+0
CONECT    1   14                                                            
CONECT    2   15                                                            
CONECT    3   16                                                            
CONECT    4    5    6                                                       
CONECT    5    4    9                                                       
CONECT    6    4   13                                                       
CONECT    7    9   11                                                       
CONECT    8   10   12                                                       
CONECT    9    5    7   10                                                  
CONECT   10    8    9   14                                                  
CONECT   11    7   12   15                                                  
CONECT   12    8   11   16                                                  
CONECT   13    6                                                            
CONECT   14    1   10                                                       
CONECT   15    2   11                                                       
CONECT   16    3   12                                                       
MASTER        0    0    0    0    0    0    0    0   16    0   32    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₂H₁₄O₄

Average Mass

222.2372 Da

Monoisotopic Mass

222.08921 Da

IUPAC Name

(2Z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal

Traditional Name

(2Z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal

CAS Registry Number

Not Available

SMILES

COC1=CC(OC)=C(OC)C=C1\C=C/C=O

InChI Identifier

InChI=1S/C12H14O4/c1-14-10-8-12(16-3)11(15-2)7-9(10)5-4-6-13/h4-8H,1-3H3/b5-4-

InChI Key

DNAVOCNYHNNEQI-PLNGDYQASA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Acorus calamus	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as cinnamaldehydes. These are organic aromatic compounds containing a cinnamlaldehyde moiety, consisting of a benzene and an aldehyde group to form 3-phenylprop-2-enal.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Cinnamaldehydes

Sub Class

Not Available

Direct Parent

Cinnamaldehydes

Alternative Parents

Substituents

Cinnamaldehyde
Phenoxy compound
Anisole
Methoxybenzene
Styrene
Phenol ether
Alkyl aryl ether
Benzenoid
Monocyclic benzene moiety
Alpha,beta-unsaturated aldehyde
Enal
Ether
Carbonyl group
Organooxygen compound
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Aldehyde
Aromatic homomonocyclic compound

Molecular Framework

Aromatic homomonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.17	ALOGPS
logP	1.5	ChemAxon
logS	-3.4	ALOGPS
pKa (Strongest Basic)	-4.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	44.76 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	61.52 m³·mol⁻¹	ChemAxon
Polarizability	23.02 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

HMDB0038563

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

FDB017950

KNApSAcK ID

Not Available

Chemspider ID

25028478

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

46906714

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (2z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal (NP0165639)

MOL for NP0165639 ((2z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal)

3D MOL for NP0165639 ((2z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal)

3D SDF for NP0165639 ((2z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal)

3D-SDF for NP0165639 ((2z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal)

PDB for NP0165639 ((2z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal)

3D PDB for NP0165639 ((2z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal)

SMILES for NP0165639 ((2z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal)

INCHI for NP0165639 ((2z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal)

Structure for NP0165639 ((2z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal)

3D Structure for NP0165639 ((2z)-3-(2,4,5-trimethoxyphenyl)prop-2-enal)