NP-MRD: Showing NP-Card for (5s)-3-[(1r,2s,4ar,6r,8ar)-1,6-dimethyl-2-[(1e,3e)-penta-1,3-dien-1-yl]-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl]-5-[(1s)-1-hydroxyethyl]-5h-pyrrole-2,4-diol (NP0163463)

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Record Information

Version

2.0

Created at

2022-09-02 22:06:43 UTC

Updated at

2022-09-02 22:06:43 UTC

NP-MRD ID

NP0163463

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(5s)-3-[(1r,2s,4ar,6r,8ar)-1,6-dimethyl-2-[(1e,3e)-penta-1,3-dien-1-yl]-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl]-5-[(1s)-1-hydroxyethyl]-5h-pyrrole-2,4-diol

Description

Not Available

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309032200062D          

 29 31  0  0  1  0            999 V2000
   -2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.2868   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8163   -2.3784    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0416   -2.3784    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2171   -2.4072    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4788   -3.0781    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1698   -3.8430    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3693   -4.0426    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8017   -4.3733    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7442   -5.1963    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.0027   -5.5579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4282   -5.6576    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5014   -3.9361    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.3018   -3.1356    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8321   -2.5036    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  6  5  1  1  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  9  8  1  1  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  6  0  0  0
 11 13  1  0  0  0  0
 13 14  1  0  0  0  0
 15 14  1  1  0  0  0
  9 15  1  0  0  0  0
 15 16  1  0  0  0  0
  6 16  1  0  0  0  0
 16 17  1  6  0  0  0
 16 18  1  1  0  0  0
 18 19  2  0  0  0  0
 18 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 21 23  1  0  0  0  0
 23 24  1  1  0  0  0
 24 25  1  0  0  0  0
 24 26  1  1  0  0  0
 23 27  1  0  0  0  0
 27 28  2  0  0  0  0
 20 28  1  0  0  0  0
 28 29  1  0  0  0  0
M  END

     RDKit          3D

 62 64  0  0  0  0  0  0  0  0999 V2000
   -2.2126    5.1201   -2.7117 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3763    4.0394   -1.6949 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3561    3.4460   -1.1468 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4944    2.3834   -0.1473 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4466    1.7949    0.3960 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6849    0.7260    1.4023 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.0917    0.7499    1.7823 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9101   -0.1989    1.4923 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5156   -1.3889    0.7577 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.3048   -1.3539   -0.5680 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3096   -2.7293   -1.1997 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.4926   -3.4883   -0.6990 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9948   -3.3707   -0.8132 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9272   -2.2258   -0.8304 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0518   -1.6128    0.5399 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.1026   -0.5945    0.9835 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.6074   -1.1512    2.2504 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9527   -0.3089    0.0045 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7074   -0.7345   -1.1986 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2227    0.3834    0.1965 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1001    0.5737   -0.8229 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9875    0.1856   -2.1472 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2786    1.2972   -0.3204 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.5671    0.5419   -0.5835 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.5345   -0.8494   -0.0214 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6218    1.2844   -0.0479 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0174    1.5066    1.0488 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.8627    0.9905    1.3273 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4025    1.0870    2.6479 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1738    5.6711   -2.7528 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4446    5.8340   -2.3740 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9860    4.6900   -3.7260 H   0  0  0  0  0  0  0  0  0  0  0  0
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    0.5207    2.1377    0.0672 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.4589    1.6233    2.3403 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.7422   -4.3830   -1.3323 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3717   -2.7947   -0.6705 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2896   -3.7801    0.3521 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0882   -3.7509    0.2161 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6714   -4.1779   -1.4738 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0033   -2.7857   -0.9390 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2285   -1.5676   -1.6640 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8459   -2.5474    1.1969 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1295   -2.1592    2.4968 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3764   -0.5496    3.1416 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6463   -1.3888    2.0752 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5516   -0.5423   -2.5647 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3354    2.2415   -0.9225 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7580    0.4748   -1.6725 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9780   -0.8956    0.9372 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1591   -1.6061   -0.7523 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5817   -1.1438    0.2151 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8260    0.8774    0.8353 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7861    0.4376    3.3214 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
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  5  6  1  0
  6  7  1  0
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  8  9  1  0
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 16  6  1  0
 28 20  1  0
 15  9  1  0
  1 30  1  0
  1 31  1  0
  1 32  1  0
  2 33  1  0
  3 34  1  0
  4 35  1  0
  5 36  1  0
  6 37  1  1
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 11 43  1  6
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 13 47  1  0
 13 48  1  0
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 14 50  1  0
 15 51  1  1
 17 52  1  0
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 22 55  1  0
 23 56  1  6
 29 62  1  0
 24 57  1  6
 25 58  1  0
 25 59  1  0
 25 60  1  0
 26 61  1  0
M  END


  Mrv1652309032200062D          

 29 31  0  0  1  0            999 V2000
   -2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.2868   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8163   -2.3784    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0416   -2.3784    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2171   -2.4072    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4788   -3.0781    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1698   -3.8430    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3693   -4.0426    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8017   -4.3733    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7442   -5.1963    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.0027   -5.5579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4282   -5.6576    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5014   -3.9361    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.3018   -3.1356    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8321   -2.5036    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  6  5  1  1  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  9  8  1  1  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  6  0  0  0
 11 13  1  0  0  0  0
 13 14  1  0  0  0  0
 15 14  1  1  0  0  0
  9 15  1  0  0  0  0
 15 16  1  0  0  0  0
  6 16  1  0  0  0  0
 16 17  1  6  0  0  0
 16 18  1  1  0  0  0
 18 19  2  0  0  0  0
 18 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 21 23  1  0  0  0  0
 23 24  1  1  0  0  0
 24 25  1  0  0  0  0
 24 26  1  1  0  0  0
 23 27  1  0  0  0  0
 27 28  2  0  0  0  0
 20 28  1  0  0  0  0
 28 29  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0163463

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C\C=C\C=C\[C@H]1C=C[C@H]2C[C@H](C)CC[C@H]2[C@@]1(C)C(=O)C1=C(O)[C@@H](N=C1O)[C@H](C)O

> <INCHI_IDENTIFIER>
InChI=1S/C24H33NO4/c1-5-6-7-8-17-11-10-16-13-14(2)9-12-18(16)24(17,4)22(28)19-21(27)20(15(3)26)25-23(19)29/h5-8,10-11,14-18,20,26-27H,9,12-13H2,1-4H3,(H,25,29)/b6-5+,8-7+/t14-,15+,16+,17+,18-,20+,24+/m1/s1

> <INCHI_KEY>
SMYSDPRSUUVSHP-CTTMZCGWSA-N

> <FORMULA>
C24H33NO4

> <MOLECULAR_WEIGHT>
399.531

> <EXACT_MASS>
399.240958547

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
62

> <JCHEM_AVERAGE_POLARIZABILITY>
45.50114825687291

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2S)-4-[(1R,2S,4aR,6R,8aR)-1,6-dimethyl-2-[(1E,3E)-penta-1,3-dien-1-yl]-1,2,4a,5,6,7,8,8a-octahydronaphthalene-1-carbonyl]-2-[(1S)-1-hydroxyethyl]-2H-pyrrole-3,5-diol

> <ALOGPS_LOGP>
4.07

> <JCHEM_LOGP>
4.361501595333333

> <ALOGPS_LOGS>
-4.72

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
9.649441541311603

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.237018651335275

> <JCHEM_PKA_STRONGEST_BASIC>
0.9026770640214768

> <JCHEM_POLAR_SURFACE_AREA>
90.12

> <JCHEM_REFRACTIVITY>
118.66909999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
7.57e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(5S)-3-[(1R,2S,4aR,6R,8aR)-1,6-dimethyl-2-[(1E,3E)-penta-1,3-dien-1-yl]-4a,5,6,7,8,8a-hexahydro-2H-naphthalene-1-carbonyl]-5-[(1S)-1-hydroxyethyl]-5H-pyrrole-2,4-diol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 03-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   03-SEP-22         0                                  
HETATM    1  C   UNK     0      -5.335  -3.080   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -4.001  -2.310   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -2.667  -3.080   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.000  -3.080   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       6.668  -0.770   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       8.002  -0.000   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.668  -2.310   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       5.335  -3.080   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       3.390  -4.440   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.944  -4.440   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       0.405  -4.493   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       2.760  -5.746   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       2.184  -7.174   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0       0.689  -7.546   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0       3.363  -8.163   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       3.256  -9.700   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       1.872 -10.375   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       4.533 -10.561   0.000  0.00  0.00           O+0
HETATM   27  N   UNK     0       4.669  -7.347   0.000  0.00  0.00           N+0
HETATM   28  C   UNK     0       4.297  -5.853   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0       5.287  -4.673   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7   16                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10   15                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14    9   16                                                  
CONECT   16   15    6   17   18                                             
CONECT   17   16                                                            
CONECT   18   16   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   21   28                                                  
CONECT   21   20   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21   24   27                                                  
CONECT   24   23   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24                                                            
CONECT   27   23   28                                                       
CONECT   28   27   20   29                                                  
CONECT   29   28                                                            
MASTER        0    0    0    0    0    0    0    0   29    0   62    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₄H₃₃NO₄

Average Mass

399.5310 Da

Monoisotopic Mass

399.24096 Da

IUPAC Name

(2S)-4-[(1R,2S,4aR,6R,8aR)-1,6-dimethyl-2-[(1E,3E)-penta-1,3-dien-1-yl]-1,2,4a,5,6,7,8,8a-octahydronaphthalene-1-carbonyl]-2-[(1S)-1-hydroxyethyl]-2H-pyrrole-3,5-diol

Traditional Name

(5S)-3-[(1R,2S,4aR,6R,8aR)-1,6-dimethyl-2-[(1E,3E)-penta-1,3-dien-1-yl]-4a,5,6,7,8,8a-hexahydro-2H-naphthalene-1-carbonyl]-5-[(1S)-1-hydroxyethyl]-5H-pyrrole-2,4-diol

CAS Registry Number

Not Available

SMILES

C\C=C\C=C\[C@H]1C=C[C@H]2C[C@H](C)CC[C@H]2[C@@]1(C)C(=O)C1=C(O)[C@@H](N=C1O)[C@H](C)O

InChI Identifier

InChI=1S/C24H33NO4/c1-5-6-7-8-17-11-10-16-13-14(2)9-12-18(16)24(17,4)22(28)19-21(27)20(15(3)26)25-23(19)29/h5-8,10-11,14-18,20,26-27H,9,12-13H2,1-4H3,(H,25,29)/b6-5+,8-7+/t14-,15+,16+,17+,18-,20+,24+/m1/s1

InChI Key

SMYSDPRSUUVSHP-CTTMZCGWSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.07	ALOGPS
logP	4.36	ChemAxon
logS	-4.7	ALOGPS
pKa (Strongest Acidic)	4.24	ChemAxon
pKa (Strongest Basic)	0.9	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	90.12 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	118.67 m³·mol⁻¹	ChemAxon
Polarizability	45.5 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (5s)-3-[(1r,2s,4ar,6r,8ar)-1,6-dimethyl-2-[(1e,3e)-penta-1,3-dien-1-yl]-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl]-5-[(1s)-1-hydroxyethyl]-5h-pyrrole-2,4-diol (NP0163463)

MOL for NP0163463 ((5s)-3-[(1r,2s,4ar,6r,8ar)-1,6-dimethyl-2-[(1e,3e)-penta-1,3-dien-1-yl]-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl]-5-[(1s)-1-hydroxyethyl]-5h-pyrrole-2,4-diol)

3D MOL for NP0163463 ((5s)-3-[(1r,2s,4ar,6r,8ar)-1,6-dimethyl-2-[(1e,3e)-penta-1,3-dien-1-yl]-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl]-5-[(1s)-1-hydroxyethyl]-5h-pyrrole-2,4-diol)

3D SDF for NP0163463 ((5s)-3-[(1r,2s,4ar,6r,8ar)-1,6-dimethyl-2-[(1e,3e)-penta-1,3-dien-1-yl]-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl]-5-[(1s)-1-hydroxyethyl]-5h-pyrrole-2,4-diol)

3D-SDF for NP0163463 ((5s)-3-[(1r,2s,4ar,6r,8ar)-1,6-dimethyl-2-[(1e,3e)-penta-1,3-dien-1-yl]-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl]-5-[(1s)-1-hydroxyethyl]-5h-pyrrole-2,4-diol)

PDB for NP0163463 ((5s)-3-[(1r,2s,4ar,6r,8ar)-1,6-dimethyl-2-[(1e,3e)-penta-1,3-dien-1-yl]-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl]-5-[(1s)-1-hydroxyethyl]-5h-pyrrole-2,4-diol)

3D PDB for NP0163463 ((5s)-3-[(1r,2s,4ar,6r,8ar)-1,6-dimethyl-2-[(1e,3e)-penta-1,3-dien-1-yl]-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl]-5-[(1s)-1-hydroxyethyl]-5h-pyrrole-2,4-diol)

SMILES for NP0163463 ((5s)-3-[(1r,2s,4ar,6r,8ar)-1,6-dimethyl-2-[(1e,3e)-penta-1,3-dien-1-yl]-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl]-5-[(1s)-1-hydroxyethyl]-5h-pyrrole-2,4-diol)

INCHI for NP0163463 ((5s)-3-[(1r,2s,4ar,6r,8ar)-1,6-dimethyl-2-[(1e,3e)-penta-1,3-dien-1-yl]-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl]-5-[(1s)-1-hydroxyethyl]-5h-pyrrole-2,4-diol)

Structure for NP0163463 ((5s)-3-[(1r,2s,4ar,6r,8ar)-1,6-dimethyl-2-[(1e,3e)-penta-1,3-dien-1-yl]-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl]-5-[(1s)-1-hydroxyethyl]-5h-pyrrole-2,4-diol)

3D Structure for NP0163463 ((5s)-3-[(1r,2s,4ar,6r,8ar)-1,6-dimethyl-2-[(1e,3e)-penta-1,3-dien-1-yl]-4a,5,6,7,8,8a-hexahydro-2h-naphthalene-1-carbonyl]-5-[(1s)-1-hydroxyethyl]-5h-pyrrole-2,4-diol)