NP-MRD: Showing NP-Card for (3r,5r)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid (NP0162126)

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Record Information

Version

2.0

Created at

2022-09-02 20:27:48 UTC

Updated at

2022-09-02 20:27:48 UTC

NP-MRD ID

NP0162126

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(3r,5r)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid

Description

Burkinabin B belongs to the class of organic compounds known as quinic acids and derivatives. Quinic acids and derivatives are compounds containing a quinic acid moiety (or a derivative thereof), which is a cyclitol made up of a cyclohexane ring that bears four hydroxyl groups at positions 1,3.4, And 5, as well as a carboxylic acid at position 1. (3r,5r)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid is found in Zanthoxylum zanthoxyloides. (3r,5r)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid was first documented in 2009 (PMID: 19110407). Based on a literature review very few articles have been published on Burkinabin B.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309022222272D          

 35 37  0  0  1  0            999 V2000
    3.5724   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -4.1250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -5.3625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -6.1875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -7.4250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -7.8375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.1447   -7.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -7.8375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1413   -7.0623    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.6716   -7.9808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9538   -8.7560    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.2019   -7.3488    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -9.0750    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.1447   -9.9000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592  -10.3125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737   -9.9000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592  -11.1375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737  -11.5500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737  -12.3750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592  -12.7875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592  -13.6125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447  -12.3750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302  -12.7875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158  -12.3750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447  -11.5500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -9.0750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -5.3625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -4.9500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  6  8  1  0  0  0  0
  9  8  1  6  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 11 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  1  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 19 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 24 25  1  0  0  0  0
 24 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 26 29  2  0  0  0  0
 21 29  1  0  0  0  0
 17 30  1  0  0  0  0
  9 30  1  0  0  0  0
 30 31  1  0  0  0  0
  5 32  2  0  0  0  0
 32 33  1  0  0  0  0
 33 34  2  0  0  0  0
  3 34  1  0  0  0  0
 34 35  1  0  0  0  0
M  END

     RDKit          3D

 59 61  0  0  0  0  0  0  0  0999 V2000
   -7.8494    0.3978    2.6270 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8248   -0.9051    2.0858 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7288   -1.2870    1.3256 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6740   -0.4557    1.0794 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5761   -0.8149    0.3275 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4739    0.1039    0.0909 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5366    1.2503    0.5895 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3481   -0.1822   -0.6463 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3088    0.7414   -0.8459 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1819    1.1964   -2.2824 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1487    2.3369   -2.2005 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5010    3.2353   -1.1985 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0893    3.0744   -3.4752 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2090    2.4851   -4.5345 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3607    4.4215   -3.5214 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1638    1.6792   -1.9639 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1959    0.5115   -1.0540 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3659    0.5759   -0.2685 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4502   -0.2514   -0.3431 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3617   -1.1513   -1.2123 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6307   -0.1178    0.5115 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7199    0.8725    1.4644 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8169    1.0255    2.2842 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8915    0.1555    2.1630 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9950    0.2988    2.9781 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.8262   -0.8476    1.2134 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9160   -1.6968    1.1205 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.9357   -2.7508    0.1774 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7013   -0.9771    0.3976 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0408    0.1742   -0.3071 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2138   -1.2115   -0.2321 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5866   -2.1031   -0.1882 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6459   -2.9523    0.0534 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7223   -2.5518    0.8101 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7934   -3.4132    1.0531 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8062    0.6228    3.1182 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9718    0.5187    3.2965 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7128    1.1077    1.7747 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7212    0.5544    1.5143 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6290    1.6753   -0.2920 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7222    0.4447   -2.9374 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1351    1.5974   -2.6153 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4202    3.5160   -1.3317 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0544    5.1073   -2.9118 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8472    2.4856   -1.5595 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6188    1.4683   -2.9783 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4045   -0.3797   -1.7288 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8969    1.5621    1.5786 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8882    1.8050    3.0348 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.7585   -0.3500    2.8641 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2352   -3.5311    0.5584 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.9698   -3.1093    0.1045 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5954   -2.3151   -0.7840 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6708   -1.7652   -0.3356 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0198    0.5026    0.7740 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1787   -1.6318   -1.1377 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7710   -2.4481   -0.7783 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6892   -3.9740   -0.3363 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7770   -4.3298    0.6734 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5 32  2  0
 32 33  1  0
 33 34  2  0
 34 35  1  0
  5  6  1  0
  6  7  2  0
  6  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  1
 11 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  2  0
 19 21  1  0
 21 22  2  0
 22 23  1  0
 23 24  2  0
 24 25  1  0
 24 26  1  0
 26 27  1  0
 27 28  1  0
 26 29  2  0
 17 30  1  0
 30 31  1  0
 11 13  1  0
 13 15  1  0
 13 14  2  0
 34  3  1  0
 30  9  1  0
 29 21  1  0
  1 36  1  0
  1 37  1  0
  1 38  1  0
  4 39  1  0
 32 57  1  0
 33 58  1  0
 35 59  1  0
  9 40  1  1
 10 41  1  0
 10 42  1  0
 12 43  1  0
 16 45  1  0
 16 46  1  0
 17 47  1  6
 22 48  1  0
 23 49  1  0
 25 50  1  0
 28 51  1  0
 28 52  1  0
 28 53  1  0
 29 54  1  0
 30 55  1  1
 31 56  1  0
 15 44  1  0
M  END


  Mrv1652309022222272D          

 35 37  0  0  1  0            999 V2000
    3.5724   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -4.1250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -5.3625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -6.1875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -7.4250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -7.8375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.1447   -7.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -7.8375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1413   -7.0623    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.6716   -7.9808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9538   -8.7560    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.2019   -7.3488    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -9.0750    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.1447   -9.9000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592  -10.3125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737   -9.9000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592  -11.1375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737  -11.5500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737  -12.3750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592  -12.7875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592  -13.6125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447  -12.3750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302  -12.7875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158  -12.3750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447  -11.5500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -8.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -9.0750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -5.3625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -4.9500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  6  8  1  0  0  0  0
  9  8  1  6  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 11 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  1  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 19 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 24 25  1  0  0  0  0
 24 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 26 29  2  0  0  0  0
 21 29  1  0  0  0  0
 17 30  1  0  0  0  0
  9 30  1  0  0  0  0
 30 31  1  0  0  0  0
  5 32  2  0  0  0  0
 32 33  1  0  0  0  0
 33 34  2  0  0  0  0
  3 34  1  0  0  0  0
 34 35  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0162126

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC(=CC=C1O)C(=O)O[C@@H]1CC(O)(C[C@@H](OC(=O)C2=CC=C(O)C(OC)=C2)C1O)C(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C23H24O12/c1-32-15-7-11(3-5-13(15)24)20(27)34-17-9-23(31,22(29)30)10-18(19(17)26)35-21(28)12-4-6-14(25)16(8-12)33-2/h3-8,17-19,24-26,31H,9-10H2,1-2H3,(H,29,30)/t17-,18-,19?,23?/m1/s1

> <INCHI_KEY>
ZGIUMGMFRAGSOI-XMFZZSFMSA-N

> <FORMULA>
C23H24O12

> <MOLECULAR_WEIGHT>
492.433

> <EXACT_MASS>
492.126776213

> <JCHEM_ACCEPTOR_COUNT>
10

> <JCHEM_ATOM_COUNT>
59

> <JCHEM_AVERAGE_POLARIZABILITY>
47.61437642037027

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(3R,5R)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid

> <ALOGPS_LOGP>
1.54

> <JCHEM_LOGP>
1.37283669

> <ALOGPS_LOGS>
-2.96

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
8.687604692290668

> <JCHEM_PKA_STRONGEST_ACIDIC>
2.6928349168574597

> <JCHEM_PKA_STRONGEST_BASIC>
-3.604095807239262

> <JCHEM_POLAR_SURFACE_AREA>
189.27999999999997

> <JCHEM_REFRACTIVITY>
116.23740000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
5.41e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(3R,5R)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 02-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   02-SEP-22         0                                  
HETATM    1  C   UNK     0       6.668  -6.930   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       8.002  -7.700   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       8.002  -9.240   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       9.336 -10.010   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       9.336 -11.550   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      10.669 -12.320   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0      12.003 -11.550   0.000  0.00  0.00           O+0
HETATM    8  O   UNK     0      10.669 -13.860   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0      12.003 -14.630   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      13.337 -13.860   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      14.670 -14.630   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0      15.197 -13.183   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0      16.187 -14.897   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0      16.714 -16.345   0.000  0.00  0.00           O+0
HETATM   15  O   UNK     0      17.177 -13.718   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0      14.670 -16.170   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      13.337 -16.940   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0      13.337 -18.480   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0      14.670 -19.250   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0      16.004 -18.480   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0      14.670 -20.790   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      16.004 -21.560   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      16.004 -23.100   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      14.670 -23.870   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0      14.670 -25.410   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0      13.337 -23.100   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0      12.003 -23.870   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0      10.669 -23.100   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      13.337 -21.560   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      12.003 -16.170   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0      10.669 -16.940   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0       8.002 -12.320   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       6.668 -11.550   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       6.668 -10.010   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0       5.335  -9.240   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   34                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   32                                                  
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9                                                       
CONECT    9    8   10   30                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12   13   16                                             
CONECT   12   11                                                            
CONECT   13   11   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13                                                            
CONECT   16   11   17                                                       
CONECT   17   16   18   30                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   22   29                                                  
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   27   29                                                  
CONECT   27   26   28                                                       
CONECT   28   27                                                            
CONECT   29   26   21                                                       
CONECT   30   17    9   31                                                  
CONECT   31   30                                                            
CONECT   32    5   33                                                       
CONECT   33   32   34                                                       
CONECT   34   33    3   35                                                  
CONECT   35   34                                                            
MASTER        0    0    0    0    0    0    0    0   35    0   74    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₃H₂₄O₁₂

Average Mass

492.4330 Da

Monoisotopic Mass

492.12678 Da

IUPAC Name

(3R,5R)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid

Traditional Name

(3R,5R)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid

CAS Registry Number

Not Available

SMILES

COC1=CC(=CC=C1O)C(=O)O[C@@H]1CC(O)(C[C@@H](OC(=O)C2=CC=C(O)C(OC)=C2)C1O)C(O)=O

InChI Identifier

InChI=1S/C23H24O12/c1-32-15-7-11(3-5-13(15)24)20(27)34-17-9-23(31,22(29)30)10-18(19(17)26)35-21(28)12-4-6-14(25)16(8-12)33-2/h3-8,17-19,24-26,31H,9-10H2,1-2H3,(H,29,30)/t17-,18-,19?,23?/m1/s1

InChI Key

ZGIUMGMFRAGSOI-XMFZZSFMSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Zanthoxylum zanthoxyloides	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as quinic acids and derivatives. Quinic acids and derivatives are compounds containing a quinic acid moiety (or a derivative thereof), which is a cyclitol made up of a cyclohexane ring that bears four hydroxyl groups at positions 1,3.4, And 5, as well as a carboxylic acid at position 1.

Kingdom

Organic compounds

Super Class

Organic oxygen compounds

Class

Organooxygen compounds

Sub Class

Alcohols and polyols

Direct Parent

Quinic acids and derivatives

Alternative Parents

Substituents

Quinic acid
P-hydroxybenzoic acid alkyl ester
P-hydroxybenzoic acid ester
M-methoxybenzoic acid or derivatives
Benzoate ester
Methoxyphenol
Benzoic acid or derivatives
Tricarboxylic acid or derivatives
Methoxybenzene
Phenol ether
Anisole
Phenoxy compound
Benzoyl
Phenol
1-hydroxy-2-unsubstituted benzenoid
Cyclohexanol
Alkyl aryl ether
Alpha-hydroxy acid
Benzenoid
Hydroxy acid
Monocyclic benzene moiety
Tertiary alcohol
Secondary alcohol
Carboxylic acid ester
Ether
Carboxylic acid
Carboxylic acid derivative
Organic oxide
Hydrocarbon derivative
Carbonyl group
Aromatic homomonocyclic compound

Molecular Framework

Aromatic homomonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.54	ALOGPS
logP	1.37	ChemAxon
logS	-3	ALOGPS
pKa (Strongest Acidic)	2.69	ChemAxon
pKa (Strongest Basic)	-3.6	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	10	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	189.28 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	116.24 m³·mol⁻¹	ChemAxon
Polarizability	47.61 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00035544

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

23250813

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Ouattara B, Jansen O, Angenot L, Guissou IP, Frederich M, Fondu P, Tits M: Antisickling properties of divanilloylquinic acids isolated from Fagara zanthoxyloides Lam. (Rutaceae). Phytomedicine. 2009 Mar;16(2-3):125-9. doi: 10.1016/j.phymed.2008.10.013. Epub 2008 Dec 24. [PubMed:19110407 ]
LOTUS database [Link]

Showing NP-Card for (3r,5r)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid (NP0162126)

MOL for NP0162126 ((3r,5r)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid)

3D MOL for NP0162126 ((3r,5r)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid)

3D SDF for NP0162126 ((3r,5r)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid)

3D-SDF for NP0162126 ((3r,5r)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid)

PDB for NP0162126 ((3r,5r)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid)

3D PDB for NP0162126 ((3r,5r)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid)

SMILES for NP0162126 ((3r,5r)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid)

INCHI for NP0162126 ((3r,5r)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid)

Structure for NP0162126 ((3r,5r)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid)

3D Structure for NP0162126 ((3r,5r)-1,4-dihydroxy-3,5-bis(4-hydroxy-3-methoxybenzoyloxy)cyclohexane-1-carboxylic acid)