NP-MRD: Showing NP-Card for (1s,7ar)-7-({[(2r)-2,3-dihydroxy-2-[(1s)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1h-pyrrolizin-1-yl (2z)-2-methylbut-2-enoate (NP0161674)

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Record Information

Version

2.0

Created at

2022-09-02 19:54:49 UTC

Updated at

2022-09-02 19:54:49 UTC

NP-MRD ID

NP0161674

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1s,7ar)-7-({[(2r)-2,3-dihydroxy-2-[(1s)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1h-pyrrolizin-1-yl (2z)-2-methylbut-2-enoate

Description

LASIOCARPINE belongs to the class of organic compounds known as alkaloids and derivatives. These are naturally occurring chemical compounds that contain mostly basic nitrogen atoms. This group also includes some related compounds with neutral and even weakly acidic properties. Also some synthetic compounds of similar structure are attributed to alkaloids. In addition to carbon, hydrogen and nitrogen, alkaloids may also contain oxygen, sulfur and more rarely other elements such as chlorine, bromine, and phosphorus. (1s,7ar)-7-({[(2r)-2,3-dihydroxy-2-[(1s)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1h-pyrrolizin-1-yl (2z)-2-methylbut-2-enoate is found in Cynoglossum officinale. (1s,7ar)-7-({[(2r)-2,3-dihydroxy-2-[(1s)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1h-pyrrolizin-1-yl (2z)-2-methylbut-2-enoate was first documented in 2022 (PMID: 35128999). Based on a literature review a small amount of articles have been published on LASIOCARPINE (PMID: 35086011) (PMID: 36012484) (PMID: 35610518) (PMID: 35500694).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309022221542D          

 29 30  0  0  1  0            999 V2000
   -1.4063   -2.2216    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8543   -2.8347    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0473   -2.6631    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5047   -3.2762    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2076   -1.8785    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3444   -1.2654    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0146   -1.7070    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2695   -0.9224    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7846   -0.2549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2695    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0542    0.1576    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.8388    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3237   -0.2549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8388   -0.9224    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0937   -1.7070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9007   -1.8785    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1556   -2.6631    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6036   -3.2762    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9626   -2.8347    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.7911   -3.6416    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7696   -3.0062    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.3216   -2.3931    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0245   -3.7908    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.8315   -3.9624    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1341   -2.0277    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3057   -1.2207    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9411   -2.1992    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3272   -1.8562    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0542   -0.6674    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
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  8  7  1  1  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
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 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
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  8 29  1  0  0  0  0
 29 11  1  6  0  0  0
M  END

     RDKit          3D

 62 63  0  0  0  0  0  0  0  0999 V2000
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   -2.4183    0.3698   -0.6219 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.3225    1.4308    0.3594 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6516    0.9015   -1.7841 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.5717    0.0001   -2.9849 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3152    1.1896   -1.4389 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0015    2.5217   -1.5336 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9066    0.2598   -0.8405 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4955    1.6313   -1.1788 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3536   -0.6787   -1.8947 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4583   -0.0680    0.4159 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6501   -2.1673    1.2743 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.2498    4.8974    2.8019 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5933    3.2907    3.1621 H   0  0  0  0  0  0  0  0  0  0  0  0
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    4.3892    3.9504    2.4336 H   0  0  0  0  0  0  0  0  0  0  0  0
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    0.7389   -0.2988    0.7709 H   0  0  0  0  0  0  0  0  0  0  0  0
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    2.3435   -0.6017   -1.4388 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.5294    1.1897    0.9266 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0865    1.8932   -2.0451 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7273    0.4203   -3.6222 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5016    0.0336   -3.5967 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3122   -1.0186   -2.6411 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0720    2.6327   -1.2419 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6092    3.1852   -0.8994 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0578    2.8987   -2.5886 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4309    1.7931   -2.2683 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5744    1.5934   -0.8746 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9535    2.4342   -0.6259 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2507   -1.2808   -1.5371 H   0  0  0  0  0  0  0  0  0  0  0  0
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 27 59  1  0
 27 60  1  0
 28 61  1  0
M  END


  Mrv1652309022221542D          

 29 30  0  0  1  0            999 V2000
   -1.4063   -2.2216    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8543   -2.8347    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0473   -2.6631    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5047   -3.2762    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2076   -1.8785    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3444   -1.2654    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0146   -1.7070    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2695   -0.9224    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7846   -0.2549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2695    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0542    0.1576    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.8388    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3237   -0.2549    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    3.9007   -1.8785    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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    4.3272   -1.8562    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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  5  7  1  0  0  0  0
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 17 18  2  0  0  0  0
 19 17  1  6  0  0  0
 19 20  1  1  0  0  0
 19 21  1  0  0  0  0
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 21 23  1  0  0  0  0
 23 24  1  0  0  0  0
 19 25  1  0  0  0  0
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 29 11  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0161674

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CO[C@@H](C)[C@](O)(C(=O)OCC1=CCN2CC[C@H](OC(=O)C(\C)=C/C)[C@@H]12)C(C)(C)O

> <INCHI_IDENTIFIER>
InChI=1S/C21H33NO7/c1-7-13(2)18(23)29-16-9-11-22-10-8-15(17(16)22)12-28-19(24)21(26,14(3)27-6)20(4,5)25/h7-8,14,16-17,25-26H,9-12H2,1-6H3/b13-7-/t14-,16-,17+,21-/m0/s1

> <INCHI_KEY>
QHOZSLCIKHUPSU-LPLKQDONSA-N

> <FORMULA>
C21H33NO7

> <MOLECULAR_WEIGHT>
411.495

> <EXACT_MASS>
411.225702407

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
62

> <JCHEM_AVERAGE_POLARIZABILITY>
43.14399030025251

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,7aR)-7-({[(2R)-2,3-dihydroxy-2-[(1S)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1H-pyrrolizin-1-yl (2Z)-2-methylbut-2-enoate

> <ALOGPS_LOGP>
1.95

> <JCHEM_LOGP>
1.3276952496666659

> <ALOGPS_LOGS>
-2.47

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA>
14.548207490780356

> <JCHEM_PKA_STRONGEST_ACIDIC>
10.539735925292826

> <JCHEM_PKA_STRONGEST_BASIC>
8.134353304418214

> <JCHEM_POLAR_SURFACE_AREA>
105.53

> <JCHEM_REFRACTIVITY>
108.12860000000003

> <JCHEM_ROTATABLE_BOND_COUNT>
10

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.39e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,7aR)-7-({[(2R)-2,3-dihydroxy-2-[(1S)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1H-pyrrolizin-1-yl (2Z)-2-methylbut-2-enoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 02-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   02-SEP-22         0                                  
HETATM    1  C   UNK     0      -2.625  -4.147   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.595  -5.291   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -0.088  -4.971   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       0.942  -6.116   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.388  -3.507   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0      -0.643  -2.362   0.000  0.00  0.00           O+0
HETATM    7  O   UNK     0       1.894  -3.186   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       2.370  -1.722   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.465  -0.476   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       2.370   0.770   0.000  0.00  0.00           C+0
HETATM   11  N   UNK     0       3.834   0.294   0.000  0.00  0.00           N+0
HETATM   12  C   UNK     0       5.299   0.770   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.204  -0.476   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       5.299  -1.722   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       5.775  -3.186   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       7.281  -3.507   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0       7.757  -4.971   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0       6.727  -6.116   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0       9.264  -5.291   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       8.943  -6.798   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0      10.770  -5.612   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      11.800  -4.467   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      11.246  -7.076   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0      12.752  -7.396   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       9.584  -3.785   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       9.904  -2.279   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      11.090  -4.105   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       8.077  -3.465   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0       3.834  -1.246   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8                                                       
CONECT    8    7    9   29                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   29                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15   29                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17   20   21   25                                             
CONECT   20   19                                                            
CONECT   21   19   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21   24                                                       
CONECT   24   23                                                            
CONECT   25   19   26   27   28                                             
CONECT   26   25                                                            
CONECT   27   25                                                            
CONECT   28   25                                                            
CONECT   29   14    8   11                                                  
MASTER        0    0    0    0    0    0    0    0   29    0   60    0
END

View in JSmol

Synonyms

Value	Source
Lasiocarpine hydrochloride, (1S-(1alpha(Z),7(2S,3R),7aalpha))-isomer	MeSH
Lasiocarpine sulfate, (1S-(1alpha(Z),7(2S,3R),7aalpha))-isomer	MeSH

Chemical Formula

C₂₁H₃₃NO₇

Average Mass

411.4950 Da

Monoisotopic Mass

411.22570 Da

IUPAC Name

(1S,7aR)-7-({[(2R)-2,3-dihydroxy-2-[(1S)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1H-pyrrolizin-1-yl (2Z)-2-methylbut-2-enoate

Traditional Name

(1S,7aR)-7-({[(2R)-2,3-dihydroxy-2-[(1S)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1H-pyrrolizin-1-yl (2Z)-2-methylbut-2-enoate

CAS Registry Number

Not Available

SMILES

CO[C@@H](C)[C@](O)(C(=O)OCC1=CCN2CC[C@H](OC(=O)C(\C)=C/C)[C@@H]12)C(C)(C)O

InChI Identifier

InChI=1S/C21H33NO7/c1-7-13(2)18(23)29-16-9-11-22-10-8-15(17(16)22)12-28-19(24)21(26,14(3)27-6)20(4,5)25/h7-8,14,16-17,25-26H,9-12H2,1-6H3/b13-7-/t14-,16-,17+,21-/m0/s1

InChI Key

QHOZSLCIKHUPSU-LPLKQDONSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Cynoglossum officinale	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as alkaloids and derivatives. These are naturally occurring chemical compounds that contain mostly basic nitrogen atoms. This group also includes some related compounds with neutral and even weakly acidic properties. Also some synthetic compounds of similar structure are attributed to alkaloids. In addition to carbon, hydrogen and nitrogen, alkaloids may also contain oxygen, sulfur and more rarely other elements such as chlorine, bromine, and phosphorus.

Kingdom

Organic compounds

Super Class

Alkaloids and derivatives

Class

Not Available

Sub Class

Not Available

Direct Parent

Alkaloids and derivatives

Alternative Parents

Substituents

Alkaloid or derivatives
Pyrrolizine
Fatty acid ester
Dicarboxylic acid or derivatives
N-alkylpyrrolidine
Fatty acyl
Pyrrolidine
Pyrroline
Tertiary alcohol
Enoate ester
Alpha,beta-unsaturated carboxylic ester
Tertiary aliphatic amine
Tertiary amine
Amino acid or derivatives
1,2-diol
Carboxylic acid ester
Azacycle
Organoheterocyclic compound
Carboxylic acid derivative
Dialkyl ether
Ether
Organic oxide
Organic nitrogen compound
Organic oxygen compound
Organonitrogen compound
Organooxygen compound
Carbonyl group
Hydrocarbon derivative
Amine
Alcohol
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.95	ALOGPS
logP	1.33	ChemAxon
logS	-2.5	ALOGPS
pKa (Strongest Acidic)	10.54	ChemAxon
pKa (Strongest Basic)	8.13	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	105.53 Å²	ChemAxon
Rotatable Bond Count	10	ChemAxon
Refractivity	108.13 m³·mol⁻¹	ChemAxon
Polarizability	43.14 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00002097

Chemspider ID

4445050

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

5281735

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Katja DG, Hilmayanti E, Nurlelasari, Mayanti T, Harneti D, Maharani R, Farabi K, Darwati, Lesmana R, Fajriah S, Supratman U, Azmi MN, Shiono Y: Limonoids from the fruits of Chisocheton lasiocarpus (Meliaceae). J Asian Nat Prod Res. 2022 Feb 7:1-8. doi: 10.1080/10286020.2022.2032678. [PubMed:35128999 ]
Izcara S, Casado N, Morante-Zarcero S, Perez-Quintanilla D, Sierra I: Miniaturized and modified QuEChERS method with mesostructured silica as clean-up sorbent for pyrrolizidine alkaloids determination in aromatic herbs. Food Chem. 2022 Jun 30;380:132189. doi: 10.1016/j.foodchem.2022.132189. Epub 2022 Jan 21. [PubMed:35086011 ]
Buchmueller J, Kaltner F, Gottschalk C, Maares M, Braeuning A, Hessel-Pras S: Structure-Dependent Toxicokinetics of Selected Pyrrolizidine Alkaloids In Vitro. Int J Mol Sci. 2022 Aug 16;23(16):9214. doi: 10.3390/ijms23169214. [PubMed:36012484 ]
Louisse J, Mulder PPJ, Gerssen A, Stoopen G, Rijkers D, van de Schans MGM, Peijnenburg AACM: Bioassay-directed analysis-based identification of relevant pyrrolizidine alkaloids. Arch Toxicol. 2022 Aug;96(8):2299-2317. doi: 10.1007/s00204-022-03308-z. Epub 2022 May 24. [PubMed:35610518 ]
Buchmueller J, Enge AM, Peters A, Ebmeyer J, Kupper JH, Schafer B, Braeuning A, Hessel-Pras S: The chemical structure impairs the intensity of genotoxic effects promoted by 1,2-unsaturated pyrrolizidine alkaloids in vitro. Food Chem Toxicol. 2022 Jun;164:113049. doi: 10.1016/j.fct.2022.113049. Epub 2022 Apr 30. [PubMed:35500694 ]
LOTUS database [Link]

Showing NP-Card for (1s,7ar)-7-({[(2r)-2,3-dihydroxy-2-[(1s)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1h-pyrrolizin-1-yl (2z)-2-methylbut-2-enoate (NP0161674)

MOL for NP0161674 ((1s,7ar)-7-({[(2r)-2,3-dihydroxy-2-[(1s)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1h-pyrrolizin-1-yl (2z)-2-methylbut-2-enoate)

3D MOL for NP0161674 ((1s,7ar)-7-({[(2r)-2,3-dihydroxy-2-[(1s)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1h-pyrrolizin-1-yl (2z)-2-methylbut-2-enoate)

3D SDF for NP0161674 ((1s,7ar)-7-({[(2r)-2,3-dihydroxy-2-[(1s)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1h-pyrrolizin-1-yl (2z)-2-methylbut-2-enoate)

3D-SDF for NP0161674 ((1s,7ar)-7-({[(2r)-2,3-dihydroxy-2-[(1s)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1h-pyrrolizin-1-yl (2z)-2-methylbut-2-enoate)

PDB for NP0161674 ((1s,7ar)-7-({[(2r)-2,3-dihydroxy-2-[(1s)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1h-pyrrolizin-1-yl (2z)-2-methylbut-2-enoate)

3D PDB for NP0161674 ((1s,7ar)-7-({[(2r)-2,3-dihydroxy-2-[(1s)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1h-pyrrolizin-1-yl (2z)-2-methylbut-2-enoate)

SMILES for NP0161674 ((1s,7ar)-7-({[(2r)-2,3-dihydroxy-2-[(1s)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1h-pyrrolizin-1-yl (2z)-2-methylbut-2-enoate)

INCHI for NP0161674 ((1s,7ar)-7-({[(2r)-2,3-dihydroxy-2-[(1s)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1h-pyrrolizin-1-yl (2z)-2-methylbut-2-enoate)

Structure for NP0161674 ((1s,7ar)-7-({[(2r)-2,3-dihydroxy-2-[(1s)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1h-pyrrolizin-1-yl (2z)-2-methylbut-2-enoate)

3D Structure for NP0161674 ((1s,7ar)-7-({[(2r)-2,3-dihydroxy-2-[(1s)-1-methoxyethyl]-3-methylbutanoyl]oxy}methyl)-2,3,5,7a-tetrahydro-1h-pyrrolizin-1-yl (2z)-2-methylbut-2-enoate)