| Record Information |
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| Version | 2.0 |
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| Created at | 2022-09-02 19:36:47 UTC |
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| Updated at | 2022-09-02 19:36:48 UTC |
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| NP-MRD ID | NP0161449 |
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| Secondary Accession Numbers | None |
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| Natural Product Identification |
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| Common Name | (9s,12r)-5,5,9,13-tetramethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane |
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| Description | Ent-Trachylobane belongs to the class of organic compounds known as kaurane diterpenoids. These are diterpene alkaloids with a structure that is based on the kaurane skeleton. Kaurane is a tetracyclic compound that arises by cyclisation of a pimarane precursor followed by rearrangement. It possesses a [3,2,1]-bicyclic ring system with C15-C16 bridge connected to C13, forming the five-membered ring D. (9s,12r)-5,5,9,13-tetramethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane is found in Sideritis lotsyi. (9s,12r)-5,5,9,13-tetramethylpentacyclo[11.2.1.0¹,¹⁰.0⁴,⁹.0¹²,¹⁴]hexadecane was first documented in 2020 (PMID: 32847772). Based on a literature review a small amount of articles have been published on ent-Trachylobane (PMID: 34762359) (PMID: 33677971) (PMID: 32911189) (PMID: 35748331). |
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| Structure | CC12CC34CC1[C@H]2CC3[C@@]1(C)CCCC(C)(C)C1CC4 InChI=1S/C20H32/c1-17(2)7-5-8-18(3)15(17)6-9-20-11-14-13(10-16(18)20)19(14,4)12-20/h13-16H,5-12H2,1-4H3/t13-,14?,15?,16?,18+,19?,20?/m1/s1 |
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| Synonyms | Not Available |
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| Chemical Formula | C20H32 |
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| Average Mass | 272.4760 Da |
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| Monoisotopic Mass | 272.25040 Da |
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| IUPAC Name | (9S,12R)-5,5,9,13-tetramethylpentacyclo[11.2.1.0^{1,10}.0^{4,9}.0^{12,14}]hexadecane |
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| Traditional Name | (9S,12R)-5,5,9,13-tetramethylpentacyclo[11.2.1.0^{1,10}.0^{4,9}.0^{12,14}]hexadecane |
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| CAS Registry Number | Not Available |
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| SMILES | CC12CC34CC1[C@H]2CC3[C@@]1(C)CCCC(C)(C)C1CC4 |
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| InChI Identifier | InChI=1S/C20H32/c1-17(2)7-5-8-18(3)15(17)6-9-20-11-14-13(10-16(18)20)19(14,4)12-20/h13-16H,5-12H2,1-4H3/t13-,14?,15?,16?,18+,19?,20?/m1/s1 |
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| InChI Key | JTJZAWZRQPNBLR-IDQJZWGZSA-N |
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| Experimental Spectra |
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| Not Available | | Predicted Spectra |
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| | Spectrum Type | Description | Depositor ID | Depositor Organization | Depositor | Deposition Date | View |
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| 1D NMR | 13C NMR Spectrum (1D, 25 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 100 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 252 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 50 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 200 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 75 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 300 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 101 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 400 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 126 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 500 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 151 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 600 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 176 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 700 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 201 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 800 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 226 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 900 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum |
| | Chemical Shift Submissions |
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| Not Available | | Species |
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| Species of Origin | |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as kaurane diterpenoids. These are diterpene alkaloids with a structure that is based on the kaurane skeleton. Kaurane is a tetracyclic compound that arises by cyclisation of a pimarane precursor followed by rearrangement. It possesses a [3,2,1]-bicyclic ring system with C15-C16 bridge connected to C13, forming the five-membered ring D. |
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| Kingdom | Organic compounds |
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| Super Class | Lipids and lipid-like molecules |
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| Class | Prenol lipids |
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| Sub Class | Diterpenoids |
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| Direct Parent | Kaurane diterpenoids |
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| Alternative Parents | |
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| Substituents | - Kaurane diterpenoid
- Villanovane, atisane, trachylobane or helvifulvane diterpenoid
- Atisane diterpenoid
- Alkaloid or derivatives
- Polycyclic hydrocarbon
- Saturated hydrocarbon
- Hydrocarbon
- Aliphatic homopolycyclic compound
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| Molecular Framework | Aliphatic homopolycyclic compounds |
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| External Descriptors | Not Available |
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| Physical Properties |
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| State | Not Available |
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| Experimental Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Predicted Properties | |
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| General References | - Munissi JJE, Isyaka SM, Mas-Claret E, Brabner M, Langat MK, Nyandoro SS, Mulholland DA: Ent-clerodane and ent-trachylobane diterpenoids from Croton dictyophlebodes. Phytochemistry. 2020 Nov;179:112487. doi: 10.1016/j.phytochem.2020.112487. Epub 2020 Aug 22. [PubMed:32847772 ]
- Wein LA, Wurst K, Magauer T: Total Synthesis and Late-Stage C-H Oxidations of ent-Trachylobane Natural Products. Angew Chem Int Ed Engl. 2022 Jan 17;61(3):e202113829. doi: 10.1002/anie.202113829. Epub 2021 Nov 27. [PubMed:34762359 ]
- Han J, Li Y, Zhou J, Zhang J, Qiao Y, Fang K, Zhang C, Zhu M, Lou H: Terpenoids from Chinese Liverworts Scapania spp. J Nat Prod. 2021 Apr 23;84(4):1210-1215. doi: 10.1021/acs.jnatprod.0c01284. Epub 2021 Mar 7. [PubMed:33677971 ]
- Jiang ZP, Yu Y, Shen L: Agallolides A-M, including two rearranged ent-atisanes featuring a bicyclo[3.2.1]octane motif, from the Chinese Excoecaria agallocha. Bioorg Chem. 2020 Nov;104:104206. doi: 10.1016/j.bioorg.2020.104206. Epub 2020 Aug 29. [PubMed:32911189 ]
- Donadio G, Chini MG, Parisi V, Mensitieri F, Malafronte N, Bifulco G, Bisio A, De Tommasi N, Bader A: Diterpenoid Constituents of Psiadia punctulata and Evaluation of Their Antimicrobial Activity. J Nat Prod. 2022 Jul 22;85(7):1667-1680. doi: 10.1021/acs.jnatprod.1c01093. Epub 2022 Jun 24. [PubMed:35748331 ]
- LOTUS database [Link]
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