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Record Information
Version1.0
Created at2022-09-02 14:15:55 UTC
Updated at2022-09-02 14:15:55 UTC
NP-MRD IDNP0156972
Secondary Accession NumbersNone
Natural Product Identification
Common Name(2s)-2-amino-n-[(2s,3r)-2-amino-3-hydroxybutanoyl]-n-[(2s)-2-{[(1z)-2-(6-bromo-1h-indol-3-yl)ethenyl]amino}-3-(3h-imidazol-4-yl)propanoyl]-3-(3,4-dihydroxyphenyl)propanamide
DescriptionHalocyamine B belongs to the class of organic compounds known as tyrosine and derivatives. Tyrosine and derivatives are compounds containing tyrosine or a derivative thereof resulting from reaction of tyrosine at the amino group or the carboxy group, or from the replacement of any hydrogen of glycine by a heteroatom. (2s)-2-amino-n-[(2s,3r)-2-amino-3-hydroxybutanoyl]-n-[(2s)-2-{[(1z)-2-(6-bromo-1h-indol-3-yl)ethenyl]amino}-3-(3h-imidazol-4-yl)propanoyl]-3-(3,4-dihydroxyphenyl)propanamide is found in Halocynthia roretzi. Based on a literature review very few articles have been published on Halocyamine B.
Structure
Thumb
Synonyms
ValueSource
Threonyl-6,7-dihydroxyphenylalanyl-histidyl-6-bromo-8,9-didehydrotryptamineMeSH
Chemical FormulaC29H32BrN7O6
Average Mass654.5220 Da
Monoisotopic Mass653.15974 Da
IUPAC Name(2S)-2-amino-N-[(2S,3R)-2-amino-3-hydroxybutanoyl]-N-[(2S)-2-{[(Z)-2-(6-bromo-1H-indol-3-yl)ethenyl]amino}-3-(1H-imidazol-5-yl)propanoyl]-3-(3,4-dihydroxyphenyl)propanamide
Traditional Name(2S)-2-amino-N-[(2S,3R)-2-amino-3-hydroxybutanoyl]-N-[(2S)-2-{[(Z)-2-(6-bromo-1H-indol-3-yl)ethenyl]amino}-3-(3H-imidazol-4-yl)propanoyl]-3-(3,4-dihydroxyphenyl)propanamide
CAS Registry NumberNot Available
SMILES
C[C@@H](O)[C@H](N)C(=O)N(C(=O)[C@@H](N)CC1=CC=C(O)C(O)=C1)C(=O)[C@H](CC1=CN=CN1)N\C=C/C1=CNC2=CC(Br)=CC=C12
InChI Identifier
InChI=1S/C29H32BrN7O6/c1-15(38)26(32)29(43)37(27(41)21(31)8-16-2-5-24(39)25(40)9-16)28(42)23(11-19-13-33-14-36-19)34-7-6-17-12-35-22-10-18(30)3-4-20(17)22/h2-7,9-10,12-15,21,23,26,34-35,38-40H,8,11,31-32H2,1H3,(H,33,36)/b7-6-/t15-,21+,23+,26+/m1/s1
InChI KeyAOYPXEUCIFBDES-IKEBQYQCSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Halocynthia roretziLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as tyrosine and derivatives. Tyrosine and derivatives are compounds containing tyrosine or a derivative thereof resulting from reaction of tyrosine at the amino group or the carboxy group, or from the replacement of any hydrogen of glycine by a heteroatom.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentTyrosine and derivatives
Alternative Parents
Substituents
  • Tyrosine or derivatives
  • Phenylalanine or derivatives
  • Histidine or derivatives
  • Alpha-amino acid amide
  • Amphetamine or derivatives
  • Indole
  • Indole or derivatives
  • Catechol
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Aralkylamine
  • N-acyl-amine
  • Benzenoid
  • Substituted pyrrole
  • Carboxylic acid imide, n-substituted
  • Monocyclic benzene moiety
  • Aryl halide
  • Aryl bromide
  • Imidazole
  • Dicarboximide
  • Carboxylic acid imide
  • Azole
  • Pyrrole
  • Heteroaromatic compound
  • Secondary alcohol
  • Secondary amine
  • Secondary aliphatic amine
  • Enamine
  • Organoheterocyclic compound
  • Azacycle
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Organic oxide
  • Organic nitrogen compound
  • Primary aliphatic amine
  • Carbonyl group
  • Organohalogen compound
  • Organobromide
  • Organonitrogen compound
  • Organooxygen compound
  • Alcohol
  • Amine
  • Primary amine
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.38ALOGPS
logP0.94ChemAxon
logS-4.4ALOGPS
pKa (Strongest Acidic)9.29ChemAxon
pKa (Strongest Basic)7.1ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count8ChemAxon
Polar Surface Area223.68 ŲChemAxon
Rotatable Bond Count11ChemAxon
Refractivity162.21 m³·mol⁻¹ChemAxon
Polarizability61.45 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID4948098
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound6444161
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. LOTUS database [Link]