NP-MRD: Showing NP-Card for methyl (2e,5e)-7-[(e,e)-benzoyloxy]-4-oxohepta-2,5-dienoate (NP0156820)

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Record Information

Version

2.0

Created at

2022-09-02 14:05:24 UTC

Updated at

2022-09-02 14:05:24 UTC

NP-MRD ID

NP0156820

Secondary Accession Numbers

None

Natural Product Identification

Common Name

methyl (2e,5e)-7-[(e,e)-benzoyloxy]-4-oxohepta-2,5-dienoate

Description

Melodienone belongs to the class of organic compounds known as benzoic acid esters. These are ester derivatives of benzoic acid. methyl (2e,5e)-7-[(e,e)-benzoyloxy]-4-oxohepta-2,5-dienoate is found in Melodorum fruticosum. Based on a literature review very few articles have been published on melodienone.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 34 34  0  0  0  0  0  0  0  0999 V2000
   -4.5735   -3.0531   -2.1067 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8572   -2.5620   -0.9652 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6245   -1.9327   -1.1465 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1799   -1.8155   -2.3029 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8631   -1.4185   -0.0117 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3028   -1.5246    1.2293 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6198   -1.0474    2.4071 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1511   -1.2134    3.5281 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3422   -0.3849    2.3241 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2637    0.0424    3.4038 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5636    0.7298    3.4159 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0608    0.8824    2.1237 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5255    1.6742    1.1181 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4851    2.3401    1.3906 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1433    1.7322   -0.2007 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5702    2.5347   -1.1625 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0857    2.6517   -2.4379 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2226    1.9309   -2.7529 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8292    1.1135   -1.8168 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2704    1.0350   -0.5579 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5556   -4.1579   -2.1395 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1369   -2.6104   -3.0272 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6404   -2.7562   -1.9729 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9255   -0.9433   -0.1856 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2869   -2.0311    1.3341 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1099   -0.2704    1.3583 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2751   -0.1474    4.3535 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3284    0.1427    3.9846 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4433    1.7224    3.9098 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6936    3.0872   -0.9110 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6242    3.2857   -3.1810 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6604    1.9895   -3.7321 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7093    0.5767   -2.1149 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7453    0.3976    0.1686 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  2  0
  7  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 13 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  2  0
 20 15  1  0
  1 21  1  0
  1 22  1  0
  1 23  1  0
  5 24  1  0
  6 25  1  0
  9 26  1  0
 10 27  1  0
 11 28  1  0
 11 29  1  0
 16 30  1  0
 17 31  1  0
 18 32  1  0
 19 33  1  0
 20 34  1  0
M  END


  Mrv1652309022216052D          

 20 20  0  0  0  0            999 V2000
    0.0000    8.2500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    7.4250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    7.0125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    7.4250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    5.7750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    4.5375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    4.5375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    3.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  7  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 15 20  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0156820

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(=O)\C=C\C(=O)\C=C\COC(=O)C1=CC=CC=C1

> <INCHI_IDENTIFIER>
InChI=1S/C15H14O5/c1-19-14(17)10-9-13(16)8-5-11-20-15(18)12-6-3-2-4-7-12/h2-10H,11H2,1H3/b8-5+,10-9+

> <INCHI_KEY>
ZBHZEVCQGXSQQQ-CPSCNVPRSA-N

> <FORMULA>
C15H14O5

> <MOLECULAR_WEIGHT>
274.272

> <EXACT_MASS>
274.084123551

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
34

> <JCHEM_AVERAGE_POLARIZABILITY>
28.263983680971975

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl (2E,5E)-7-[(E,E)-benzoyloxy]-4-oxohepta-2,5-dienoate

> <ALOGPS_LOGP>
2.23

> <JCHEM_LOGP>
3.0253952743333326

> <ALOGPS_LOGS>
-4.06

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-6.526412506466351

> <JCHEM_POLAR_SURFACE_AREA>
69.67000000000002

> <JCHEM_REFRACTIVITY>
74.84510000000003

> <JCHEM_ROTATABLE_BOND_COUNT>
8

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.37e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
methyl (2E,5E)-7-[(E,E)-benzoyloxy]-4-oxohepta-2,5-dienoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 02-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   02-SEP-22         0                                  
HETATM    1  C   UNK     0       0.000  15.400   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       0.000  13.860   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0      -1.334  13.090   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      -2.667  13.860   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0      -1.334  11.550   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -2.667  10.780   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -2.667   9.240   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0      -4.001   8.470   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0      -1.334   8.470   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -1.334   6.930   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.000   6.160   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       0.000   4.620   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       1.334   3.850   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       2.667   4.620   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       2.667  -0.000   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       0.000   0.000   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16   20                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   15                                                       
MASTER        0    0    0    0    0    0    0    0   20    0   40    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₅H₁₄O₅

Average Mass

274.2720 Da

Monoisotopic Mass

274.08412 Da

IUPAC Name

methyl (2E,5E)-7-[(E,E)-benzoyloxy]-4-oxohepta-2,5-dienoate

Traditional Name

methyl (2E,5E)-7-[(E,E)-benzoyloxy]-4-oxohepta-2,5-dienoate

CAS Registry Number

Not Available

SMILES

COC(=O)\C=C\C(=O)\C=C\COC(=O)C1=CC=CC=C1

InChI Identifier

InChI=1S/C15H14O5/c1-19-14(17)10-9-13(16)8-5-11-20-15(18)12-6-3-2-4-7-12/h2-10H,11H2,1H3/b8-5+,10-9+

InChI Key

ZBHZEVCQGXSQQQ-CPSCNVPRSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Melodorum fruticosum	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as benzoic acid esters. These are ester derivatives of benzoic acid.

Kingdom

Organic compounds

Super Class

Benzenoids

Class

Benzene and substituted derivatives

Sub Class

Benzoic acids and derivatives

Direct Parent

Benzoic acid esters

Alternative Parents

Substituents

Benzoate ester
Benzoyl
Fatty acid ester
Fatty acyl
Dicarboxylic acid or derivatives
Acryloyl-group
Alpha,beta-unsaturated ketone
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Methyl ester
Enone
Carboxylic acid ester
Ketone
Carboxylic acid derivative
Organic oxygen compound
Carbonyl group
Hydrocarbon derivative
Organic oxide
Organooxygen compound
Aromatic homomonocyclic compound

Molecular Framework

Aromatic homomonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.23	ALOGPS
logP	3.03	ChemAxon
logS	-4.1	ALOGPS
pKa (Strongest Basic)	-6.5	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	69.67 Å²	ChemAxon
Rotatable Bond Count	8	ChemAxon
Refractivity	74.85 m³·mol⁻¹	ChemAxon
Polarizability	28.26 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

4534798

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

5388651

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for methyl (2e,5e)-7-[(e,e)-benzoyloxy]-4-oxohepta-2,5-dienoate (NP0156820)

MOL for NP0156820 (methyl (2e,5e)-7-[(e,e)-benzoyloxy]-4-oxohepta-2,5-dienoate)

3D MOL for NP0156820 (methyl (2e,5e)-7-[(e,e)-benzoyloxy]-4-oxohepta-2,5-dienoate)

3D SDF for NP0156820 (methyl (2e,5e)-7-[(e,e)-benzoyloxy]-4-oxohepta-2,5-dienoate)

3D-SDF for NP0156820 (methyl (2e,5e)-7-[(e,e)-benzoyloxy]-4-oxohepta-2,5-dienoate)

PDB for NP0156820 (methyl (2e,5e)-7-[(e,e)-benzoyloxy]-4-oxohepta-2,5-dienoate)

3D PDB for NP0156820 (methyl (2e,5e)-7-[(e,e)-benzoyloxy]-4-oxohepta-2,5-dienoate)

SMILES for NP0156820 (methyl (2e,5e)-7-[(e,e)-benzoyloxy]-4-oxohepta-2,5-dienoate)

INCHI for NP0156820 (methyl (2e,5e)-7-[(e,e)-benzoyloxy]-4-oxohepta-2,5-dienoate)

Structure for NP0156820 (methyl (2e,5e)-7-[(e,e)-benzoyloxy]-4-oxohepta-2,5-dienoate)

3D Structure for NP0156820 (methyl (2e,5e)-7-[(e,e)-benzoyloxy]-4-oxohepta-2,5-dienoate)