NP-MRD: Showing NP-Card for 2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxychromen-4-one (NP0156752)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-02 14:00:20 UTC

Updated at

2022-09-02 14:00:20 UTC

NP-MRD ID

NP0156752

Secondary Accession Numbers

None

Natural Product Identification

Common Name

2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxychromen-4-one

Description

2-(4-{[3,4-Dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxy-4H-chromen-4-one belongs to the class of organic compounds known as flavan-3-ols. These are flavans that bear and hydroxyl group at position 3 (B ring), but not at position 4. 2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxychromen-4-one is found in Triplaris cumingiana. 2-(4-{[3,4-Dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxy-4H-chromen-4-one is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004161519162D          

 31 34  0  0  0  0            999 V2000
   -1.5815   -6.4032    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2460   -5.6495    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7309   -4.9820    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4760   -4.1974    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8109   -4.1974    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5955   -3.9425    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5559   -4.9820    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0408   -5.6495    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
  7 12  1  0  0  0  0
 12 13  1  0  0  0  0
 10 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 15 17  1  0  0  0  0
 17 18  2  0  0  0  0
 17 19  1  0  0  0  0
 19 20  2  0  0  0  0
 20 21  1  0  0  0  0
 20 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 23 25  1  0  0  0  0
 25 26  2  0  0  0  0
 19 26  1  0  0  0  0
 26 27  1  0  0  0  0
 14 27  1  0  0  0  0
  5 28  1  0  0  0  0
 28 29  1  0  0  0  0
 28 30  1  0  0  0  0
  3 30  1  0  0  0  0
 30 31  1  0  0  0  0
M  END

     RDKit          3D

 49 52  0  0  0  0  0  0  0  0999 V2000
   -5.4690   -2.0388    2.4033 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8289   -1.4391    1.5230 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4395   -1.2701    1.5961 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8314   -1.8084    2.7000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7074   -0.6206    0.6531 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2660   -0.4083    0.6637 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4201   -0.8355    1.6432 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9503   -0.6194    1.6262 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5253    0.0760    0.5513 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8702    0.2483    0.6045 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7503    0.8578   -0.2393 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.7038   -0.0513   -0.7258 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8978    0.1859   -0.1036 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.0297   -0.3650   -0.9358 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8148   -1.7321   -1.0669 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9391    1.7153   -0.0487 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.9095    2.1881    0.7970 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5311    1.9877    0.4253 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.4976    1.8607    1.8177 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6806    0.5112   -0.4420 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1873    1.2088   -1.5387 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6745    0.2810   -0.3960 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4161   -0.1386   -0.3792 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7055   -0.2686   -0.4939 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3526    0.2658   -1.6014 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7067    0.1681   -1.7896 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2979    0.7235   -2.9191 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4573   -0.4966   -0.8250 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8642   -1.0459    0.2941 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5960   -1.7193    1.2789 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4872   -0.9186    0.4367 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2338   -2.3002    3.4548 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8038   -1.3754    2.4950 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5512   -0.9900    2.4409 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3241    1.3126   -1.1521 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9256   -0.1583    0.9415 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0148   -0.1255   -0.4972 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9470    0.1064   -1.9451 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2401   -1.9411   -1.8625 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0850    2.1348   -1.0733 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5262    2.3171    1.6995 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1845    2.9817    0.0774 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4303    0.8728    1.9896 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5961    1.5402   -2.2814 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3111    0.6312   -1.1839 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7546    0.7909   -2.3622 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3764    0.1252   -3.7437 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.5323   -0.5817   -0.9612 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.5800   -1.8426    1.2333 H   0  0  0  0  0  0  0  0  0  0  0  0
 15 14  1  0
 14 13  1  0
 13 12  1  0
 12 11  1  0
 11 10  1  0
 10  9  1  0
  9  8  2  0
  8  7  1  0
  7  6  2  0
  6 22  1  0
 22 20  2  0
 20 21  1  0
  6  5  1  0
  5  3  2  0
  3  4  1  0
  3  2  1  0
  2  1  2  0
  2 31  1  0
 31 29  2  0
 29 30  1  0
 29 28  1  0
 28 26  2  0
 26 27  1  0
 26 25  1  0
 25 24  2  0
 24 23  1  0
 11 18  1  0
 18 19  1  0
 18 16  1  0
 16 17  1  0
 16 13  1  0
 20  9  1  0
 23  5  1  0
 24 31  1  0
 15 39  1  0
 14 37  1  0
 14 38  1  0
 13 36  1  1
 11 35  1  6
  8 34  1  0
  7 33  1  0
 22 45  1  0
 21 44  1  0
  4 32  1  0
 30 49  1  0
 28 48  1  0
 27 47  1  0
 25 46  1  0
 18 42  1  1
 19 43  1  0
 16 40  1  6
 17 41  1  0
M  END


  Mrv1533004161519162D          

 31 34  0  0  0  0            999 V2000
   -1.5815   -6.4032    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2460   -5.6495    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7309   -4.9820    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4760   -4.1974    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8109   -4.1974    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5955   -3.9425    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5559   -4.9820    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0408   -5.6495    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
  7 12  1  0  0  0  0
 12 13  1  0  0  0  0
 10 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 15 17  1  0  0  0  0
 17 18  2  0  0  0  0
 17 19  1  0  0  0  0
 19 20  2  0  0  0  0
 20 21  1  0  0  0  0
 20 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 23 25  1  0  0  0  0
 25 26  2  0  0  0  0
 19 26  1  0  0  0  0
 26 27  1  0  0  0  0
 14 27  1  0  0  0  0
  5 28  1  0  0  0  0
 28 29  1  0  0  0  0
 28 30  1  0  0  0  0
  3 30  1  0  0  0  0
 30 31  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0156752

> <DATABASE_NAME>
NP-MRD

> <SMILES>
OCC1OC(OC2=CC=C(C=C2O)C2=C(O)C(=O)C3=C(O)C=C(O)C=C3O2)C(O)C1O

> <INCHI_IDENTIFIER>
InChI=1S/C20H18O11/c21-6-13-15(25)18(28)20(31-13)30-11-2-1-7(3-9(11)23)19-17(27)16(26)14-10(24)4-8(22)5-12(14)29-19/h1-5,13,15,18,20-25,27-28H,6H2

> <INCHI_KEY>
LLYWTGQCIYPEHD-UHFFFAOYSA-N

> <FORMULA>
C20H18O11

> <MOLECULAR_WEIGHT>
434.353

> <EXACT_MASS>
434.0849114

> <JCHEM_ACCEPTOR_COUNT>
11

> <JCHEM_ATOM_COUNT>
49

> <JCHEM_AVERAGE_POLARIZABILITY>
41.31788676784304

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
7

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxy-4H-chromen-4-one

> <ALOGPS_LOGP>
1.10

> <JCHEM_LOGP>
0.5185663126666668

> <ALOGPS_LOGS>
-2.71

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
7.920331429649355

> <JCHEM_PKA_STRONGEST_ACIDIC>
6.381369918440129

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9811524001423555

> <JCHEM_POLAR_SURFACE_AREA>
186.36999999999998

> <JCHEM_REFRACTIVITY>
103.0441

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
8.55e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxychromen-4-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 16-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   16-APR-15         0                                  
HETATM    1  O   UNK     0      -2.952 -11.953   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0      -2.326 -10.546   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -3.231  -9.300   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      -2.755  -7.835   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0      -4.001  -6.930   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0      -4.001  -5.390   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0      -2.667  -4.620   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -2.667  -3.080   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.334  -2.310   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.000  -3.080   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.000  -4.620   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -1.334  -5.390   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0      -1.334  -6.930   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       0.000   0.000   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0       2.667   1.540   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       5.335   1.540   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       6.668  -0.770   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       6.668  -2.310   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0       8.002  -3.080   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0       5.335  -3.080   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       2.667  -3.080   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0      -5.247  -7.835   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0      -6.712  -7.359   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0      -4.771  -9.300   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0      -5.676 -10.546   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   30                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   28                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8   12                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   14                                                  
CONECT   11   10   12                                                       
CONECT   12   11    7   13                                                  
CONECT   13   12                                                            
CONECT   14   10   15   27                                                  
CONECT   15   14   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17   20   26                                                  
CONECT   20   19   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20   23                                                       
CONECT   23   22   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23   26                                                       
CONECT   26   25   19   27                                                  
CONECT   27   26   14                                                       
CONECT   28    5   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28    3   31                                                  
CONECT   31   30                                                            
MASTER        0    0    0    0    0    0    0    0   31    0   68    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₁₈O₁₁

Average Mass

434.3530 Da

Monoisotopic Mass

434.08491 Da

IUPAC Name

2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxy-4H-chromen-4-one

Traditional Name

2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxychromen-4-one

CAS Registry Number

Not Available

SMILES

OCC1OC(OC2=CC=C(C=C2O)C2=C(O)C(=O)C3=C(O)C=C(O)C=C3O2)C(O)C1O

InChI Identifier

InChI=1S/C20H18O11/c21-6-13-15(25)18(28)20(31-13)30-11-2-1-7(3-9(11)23)19-17(27)16(26)14-10(24)4-8(22)5-12(14)29-19/h1-5,13,15,18,20-25,27-28H,6H2

InChI Key

LLYWTGQCIYPEHD-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Triplaris cumingiana	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as flavan-3-ols. These are flavans that bear and hydroxyl group at position 3 (B ring), but not at position 4.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Flavonoids

Sub Class

Flavans

Direct Parent

Flavan-3-ols

Alternative Parents

Substituents

3'-hydroxyflavonoid
3-hydroxyflavonoid
4'-hydroxyflavonoid
6-hydroxyflavonoid
8-hydroxyflavonoid
Hydroxyflavonoid
Flavan-3-ol
1-benzopyran
Chromane
Benzopyran
Pyrogallol derivative
Benzenetriol
1-hydroxy-4-unsubstituted benzenoid
1-hydroxy-2-unsubstituted benzenoid
Alkyl aryl ether
Phenol
Benzenoid
Monocyclic benzene moiety
Secondary alcohol
Polyol
Organoheterocyclic compound
Oxacycle
Ether
Hydrocarbon derivative
Alcohol
Organic oxygen compound
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.1	ALOGPS
logP	0.52	ChemAxon
logS	-2.7	ALOGPS
pKa (Strongest Acidic)	6.38	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	11	ChemAxon
Hydrogen Donor Count	7	ChemAxon
Polar Surface Area	186.37 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	103.04 m³·mol⁻¹	ChemAxon
Polarizability	41.32 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10160029

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxychromen-4-one (NP0156752)

MOL for NP0156752 (2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxychromen-4-one)

3D MOL for NP0156752 (2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxychromen-4-one)

3D SDF for NP0156752 (2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxychromen-4-one)

3D-SDF for NP0156752 (2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxychromen-4-one)

PDB for NP0156752 (2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxychromen-4-one)

3D PDB for NP0156752 (2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxychromen-4-one)

SMILES for NP0156752 (2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxychromen-4-one)

INCHI for NP0156752 (2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxychromen-4-one)

Structure for NP0156752 (2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxychromen-4-one)

3D Structure for NP0156752 (2-(4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-3-hydroxyphenyl)-3,5,7-trihydroxychromen-4-one)