NP-MRD: Showing NP-Card for 5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0¹,¹¹.0³,⁷]dodecane-5-carboxylic acid (NP0156350)

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Record Information

Version

2.0

Created at

2022-09-02 13:32:34 UTC

Updated at

2022-09-02 13:32:34 UTC

NP-MRD ID

NP0156350

Secondary Accession Numbers

None

Natural Product Identification

Common Name

5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0¹,¹¹.0³,⁷]dodecane-5-carboxylic acid

Description

Phellodonic acid, also known as phellodonate, belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units. 5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0¹,¹¹.0³,⁷]dodecane-5-carboxylic acid is found in Phellodon melaleucus. 5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0¹,¹¹.0³,⁷]dodecane-5-carboxylic acid was first documented in 1993 (PMID: 8216611). Based on a literature review very few articles have been published on Phellodonic acid.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309022215322D          

 29 32  0  0  0  0            999 V2000
    2.9072   -2.4432    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1927   -2.8557    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1065   -3.6762    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7195   -4.2282    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2995   -3.8477    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4745   -3.8477    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8870   -3.1333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1333   -2.7977    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2195   -1.9772    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1930   -1.2628    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3591   -0.6497    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3084   -0.1647    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7716    0.0648    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5966    0.0648    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3591    0.7793    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1128   -0.9852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8272   -0.5727    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5417   -0.9852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5417   -1.8102    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2562   -0.5727    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9706   -0.9852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6851   -0.5727    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3996   -0.9852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1140   -0.5727    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8285   -0.9852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5430   -0.5727    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0265   -1.8057    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4390   -2.5202    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9910   -1.9071    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 11 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 16 27  1  0  0  0  0
  9 27  1  0  0  0  0
 27 28  1  0  0  0  0
  2 28  1  0  0  0  0
  7 28  1  0  0  0  0
 28 29  1  0  0  0  0
M  END

     RDKit          3D

 61 64  0  0  0  0  0  0  0  0999 V2000
   -2.8444   -2.9032   -0.6601 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4797   -1.9959    0.0554 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5691   -2.2343    0.9901 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9032   -3.3603    1.4265 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1732   -0.8894    1.2980 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.7119   -0.3343    0.0234 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5307    0.0440    0.5610 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.1317    1.4523    0.8570 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7899    1.2344    1.5449 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7720    2.2786    1.2240 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6195    1.5620    0.5082 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.6830    2.0191    1.1728 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5346    1.9859   -0.9029 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3350    2.8687   -1.3013 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3840    1.4363   -1.7453 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8403    0.1068    0.7281 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3260   -0.7570   -0.2294 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6456   -1.7386    0.0241 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0288   -1.7763    1.2405 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1706   -2.6366   -1.0034 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0961   -2.1202   -2.0194 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3988   -1.5486   -1.6214 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4134   -0.3299   -0.7771 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8545    0.1197   -0.4829 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7866    1.3662    0.3815 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1657    1.8763    0.7188 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2792   -0.0890    1.0887 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.2067   -0.5429    0.0474 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.0055   -0.0558   -1.3420 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0826   -3.9555   -0.6185 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0434   -2.6193   -1.3299 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9108   -0.8354    2.1197 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8935    1.8857    1.5643 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0831    2.1252    0.0036 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0372    1.2232    2.6453 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1593    3.1239    0.6238 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4097    2.7152    2.1798 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5590    3.0878    1.3931 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5388    1.8682    0.4926 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8189    1.4768    2.1446 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3380    1.4769   -2.7530 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2880   -0.1471    1.6910 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3188   -3.2360   -1.4635 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7199   -3.4637   -0.4297 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3394   -3.0056   -2.7067 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5344   -1.4432   -2.7325 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9780   -2.3664   -1.0703 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0614   -1.4009   -2.5383 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9205    0.4915   -1.3761 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9415   -0.3922    0.2039 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4344   -0.6744   -0.0058 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2967    0.3733   -1.4646 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2647    1.1750    1.3296 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2456    2.1692   -0.1557 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6113    1.3124    1.5619 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8524    1.8556   -0.1435 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0372    2.9371    1.0462 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3887   -0.8080    1.9565 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7461   -0.6400   -1.9748 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3088    0.9895   -1.4943 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0339   -0.3371   -1.7460 H   0  0  0  0  0  0  0  0  0  0  0  0
 26 25  1  0
 25 24  1  0
 24 23  1  0
 23 22  1  0
 22 21  1  0
 21 20  1  0
 20 18  1  0
 18 19  2  0
 18 17  1  0
 17 16  1  0
 16 27  1  0
 27  9  1  0
  9  8  1  0
  8  7  1  0
  7  6  1  6
  6  5  1  0
  5  3  1  0
  3  4  2  0
  3  2  1  0
  2  1  2  3
  2 28  1  0
 28 29  1  6
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 10 11  1  0
 11 12  1  0
 11 13  1  6
 13 15  1  0
 13 14  2  0
 11 16  1  0
 28 27  1  0
  5  7  1  0
 28  7  1  0
 26 55  1  0
 26 56  1  0
 26 57  1  0
 25 53  1  0
 25 54  1  0
 24 51  1  0
 24 52  1  0
 23 49  1  0
 23 50  1  0
 22 47  1  0
 22 48  1  0
 21 45  1  0
 21 46  1  0
 20 43  1  0
 20 44  1  0
 16 42  1  1
 27 58  1  1
  9 35  1  1
  8 33  1  0
  8 34  1  0
  5 32  1  1
  1 30  1  0
  1 31  1  0
 29 59  1  0
 29 60  1  0
 29 61  1  0
 10 36  1  0
 10 37  1  0
 12 38  1  0
 12 39  1  0
 12 40  1  0
 15 41  1  0
M  END


  Mrv1652309022215322D          

 29 32  0  0  0  0            999 V2000
    2.9072   -2.4432    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1927   -2.8557    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1065   -3.6762    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7195   -4.2282    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2995   -3.8477    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4745   -3.8477    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8870   -3.1333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1333   -2.7977    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2195   -1.9772    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1930   -1.2628    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3591   -0.6497    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3084   -0.1647    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7716    0.0648    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5966    0.0648    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3591    0.7793    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1128   -0.9852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8272   -0.5727    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5417   -0.9852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5417   -1.8102    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2562   -0.5727    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9706   -0.9852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6851   -0.5727    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3996   -0.9852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1140   -0.5727    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8285   -0.9852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5430   -0.5727    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0265   -1.8057    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4390   -2.5202    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9910   -1.9071    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 11 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 16 27  1  0  0  0  0
  9 27  1  0  0  0  0
 27 28  1  0  0  0  0
  2 28  1  0  0  0  0
  7 28  1  0  0  0  0
 28 29  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0156350

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCCCCCCC(=O)OC1C2C(CC34OC3C(=O)C(=C)C24C)CC1(C)C(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C23H32O6/c1-5-6-7-8-9-10-15(24)28-18-16-14(11-21(18,3)20(26)27)12-23-19(29-23)17(25)13(2)22(16,23)4/h14,16,18-19H,2,5-12H2,1,3-4H3,(H,26,27)

> <INCHI_KEY>
SGMJRSNRTRKWNM-UHFFFAOYSA-N

> <FORMULA>
C23H32O6

> <MOLECULAR_WEIGHT>
404.503

> <EXACT_MASS>
404.21988875

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
61

> <JCHEM_AVERAGE_POLARIZABILITY>
43.61068127180715

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0^{1,11}.0^{3,7}]dodecane-5-carboxylic acid

> <ALOGPS_LOGP>
4.11

> <JCHEM_LOGP>
4.338301146333334

> <ALOGPS_LOGS>
-4.67

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
19.171101686411873

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.110214296343283

> <JCHEM_PKA_STRONGEST_BASIC>
-4.2848844383644025

> <JCHEM_POLAR_SURFACE_AREA>
93.20000000000002

> <JCHEM_REFRACTIVITY>
104.45640000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
8.67e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0^{1,11}.0^{3,7}]dodecane-5-carboxylic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 02-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   02-SEP-22         0                                  
HETATM    1  C   UNK     0       5.427  -4.561   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       4.093  -5.331   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       3.932  -6.862   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       5.076  -7.893   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       2.426  -7.182   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       0.886  -7.182   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       1.656  -5.849   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.249  -5.222   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.410  -3.691   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.360  -2.357   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.670  -1.213   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -0.576  -0.308   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       1.440   0.121   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       2.980   0.121   0.000  0.00  0.00           O+0
HETATM   15  O   UNK     0       0.670   1.455   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       2.077  -1.839   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       3.411  -1.069   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       4.744  -1.839   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       4.744  -3.379   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       6.078  -1.069   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       7.412  -1.839   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       8.746  -1.069   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      10.079  -1.839   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      11.413  -1.069   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      12.747  -1.839   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      14.080  -1.069   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       1.916  -3.371   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       2.686  -4.704   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       3.717  -3.560   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   28                                                  
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6    7                                                  
CONECT    6    5    7                                                       
CONECT    7    6    5    8   28                                             
CONECT    8    7    9                                                       
CONECT    9    8   10   27                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12   13   16                                             
CONECT   12   11                                                            
CONECT   13   11   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13                                                            
CONECT   16   11   17   27                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25                                                            
CONECT   27   16    9   28                                                  
CONECT   28   27    2    7   29                                             
CONECT   29   28                                                            
MASTER        0    0    0    0    0    0    0    0   29    0   64    0
END

View in JSmol

Synonyms

Value	Source
Phellodonate	Generator

Chemical Formula

C₂₃H₃₂O₆

Average Mass

404.5030 Da

Monoisotopic Mass

404.21989 Da

IUPAC Name

5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0^{1,11}.0^{3,7}]dodecane-5-carboxylic acid

Traditional Name

5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0^{1,11}.0^{3,7}]dodecane-5-carboxylic acid

CAS Registry Number

Not Available

SMILES

CCCCCCCC(=O)OC1C2C(CC34OC3C(=O)C(=C)C24C)CC1(C)C(O)=O

InChI Identifier

InChI=1S/C23H32O6/c1-5-6-7-8-9-10-15(24)28-18-16-14(11-21(18,3)20(26)27)12-23-19(29-23)17(25)13(2)22(16,23)4/h14,16,18-19H,2,5-12H2,1,3-4H3,(H,26,27)

InChI Key

SGMJRSNRTRKWNM-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Phellodon melaleucus	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Sesquiterpenoids

Direct Parent

Sesquiterpenoids

Alternative Parents

Substituents

Sesquiterpenoid
Fatty acid ester
Dicarboxylic acid or derivatives
Oxane
Fatty acyl
Carboxylic acid ester
Ketone
Ether
Oxirane
Dialkyl ether
Carboxylic acid
Carboxylic acid derivative
Oxacycle
Organoheterocyclic compound
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Organic oxide
Organic oxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.11	ALOGPS
logP	4.34	ChemAxon
logS	-4.7	ALOGPS
pKa (Strongest Acidic)	4.11	ChemAxon
pKa (Strongest Basic)	-4.3	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	93.2 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	104.46 m³·mol⁻¹	ChemAxon
Polarizability	43.61 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00035920

Chemspider ID

171080

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

197633

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Stadler M, Anke T, Dasenbrock J, Steglich W: Phellodonic acid, a new biologically active hirsutane derivative from Phellodon melaleucus (Thelephoraceae, Basidiomycetes). Z Naturforsch C J Biosci. 1993 Jul-Aug;48(7-8):545-9. doi: 10.1515/znc-1993-7-803. [PubMed:8216611 ]
LOTUS database [Link]

Showing NP-Card for 5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0¹,¹¹.0³,⁷]dodecane-5-carboxylic acid (NP0156350)

MOL for NP0156350 (5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0¹,¹¹.0³,⁷]dodecane-5-carboxylic acid)

3D MOL for NP0156350 (5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0¹,¹¹.0³,⁷]dodecane-5-carboxylic acid)

3D SDF for NP0156350 (5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0¹,¹¹.0³,⁷]dodecane-5-carboxylic acid)

3D-SDF for NP0156350 (5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0¹,¹¹.0³,⁷]dodecane-5-carboxylic acid)

PDB for NP0156350 (5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0¹,¹¹.0³,⁷]dodecane-5-carboxylic acid)

3D PDB for NP0156350 (5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0¹,¹¹.0³,⁷]dodecane-5-carboxylic acid)

SMILES for NP0156350 (5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0¹,¹¹.0³,⁷]dodecane-5-carboxylic acid)

INCHI for NP0156350 (5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0¹,¹¹.0³,⁷]dodecane-5-carboxylic acid)

Structure for NP0156350 (5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0¹,¹¹.0³,⁷]dodecane-5-carboxylic acid)

3D Structure for NP0156350 (5,8-dimethyl-9-methylidene-6-(octanoyloxy)-10-oxo-12-oxatetracyclo[6.4.0.0¹,¹¹.0³,⁷]dodecane-5-carboxylic acid)