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Record Information
Version2.0
Created at2022-09-02 05:27:49 UTC
Updated at2022-09-02 05:27:49 UTC
NP-MRD IDNP0149554
Secondary Accession NumbersNone
Natural Product Identification
Common Namemethyl (1s,4as,7as)-7-[(1s)-1h,2h,3h,4h,9h-pyrido[3,4-b]indol-1-yl]-1-{[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-1h,4ah,5h,7ah-cyclopenta[c]pyran-4-carboxylate
DescriptionPsychollatine belongs to the class of organic compounds known as iridoid o-glycosides. These are iridoid monoterpenes containing a glycosyl (usually a pyranosyl) moiety linked to the iridoid skeleton. methyl (1s,4as,7as)-7-[(1s)-1h,2h,3h,4h,9h-pyrido[3,4-b]indol-1-yl]-1-{[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-1h,4ah,5h,7ah-cyclopenta[c]pyran-4-carboxylate was first documented in 2005 (PMID: 15787439). Based on a literature review a small amount of articles have been published on Psychollatine (PMID: 18288808) (PMID: 18093795) (PMID: 16562831) (PMID: 15574407).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC27H32N2O9
Average Mass528.5580 Da
Monoisotopic Mass528.21078 Da
IUPAC Namemethyl (1S,4aS,7aS)-7-[(1S)-1H,2H,3H,4H,9H-pyrido[3,4-b]indol-1-yl]-1-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-1H,4aH,5H,7aH-cyclopenta[c]pyran-4-carboxylate
Traditional Namemethyl (1S,4aS,7aS)-7-[(1S)-1H,2H,3H,4H,9H-pyrido[3,4-b]indol-1-yl]-1-{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-1H,4aH,5H,7aH-cyclopenta[c]pyran-4-carboxylate
CAS Registry NumberNot Available
SMILES
COC(=O)C1=CO[C@@H](O[C@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@H]2[C@@H]1CC=C2[C@@H]1NCCC2=C1NC1=CC=CC=C21
InChI Identifier
InChI=1S/C27H32N2O9/c1-35-25(34)16-11-36-26(38-27-24(33)23(32)22(31)18(10-30)37-27)19-13(16)6-7-15(19)20-21-14(8-9-28-20)12-4-2-3-5-17(12)29-21/h2-5,7,11,13,18-20,22-24,26-33H,6,8-10H2,1H3/t13-,18-,19+,20+,22-,23+,24-,26+,27-/m1/s1
InChI KeyCNDZNSRMCKQXEC-FEVNHLBLSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of OriginNot Available
Chemical Taxonomy
Description Belongs to the class of organic compounds known as iridoid o-glycosides. These are iridoid monoterpenes containing a glycosyl (usually a pyranosyl) moiety linked to the iridoid skeleton.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTerpene glycosides
Direct ParentIridoid O-glycosides
Alternative Parents
Substituents
  • Iridoid o-glycoside
  • Harman
  • Beta-carboline
  • Pyridoindole
  • Hexose monosaccharide
  • O-glycosyl compound
  • Glycosyl compound
  • Iridoid-skeleton
  • Aromatic monoterpenoid
  • Monoterpenoid
  • 3-alkylindole
  • Alkaloid or derivatives
  • Indole
  • Indole or derivatives
  • Aralkylamine
  • Oxane
  • Monosaccharide
  • Benzenoid
  • Pyrrole
  • Vinylogous ester
  • Heteroaromatic compound
  • Methyl ester
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Amino acid or derivatives
  • Secondary alcohol
  • Carboxylic acid ester
  • Acetal
  • Carboxylic acid derivative
  • Secondary aliphatic amine
  • Oxacycle
  • Azacycle
  • Organoheterocyclic compound
  • Secondary amine
  • Monocarboxylic acid or derivatives
  • Polyol
  • Hydrocarbon derivative
  • Amine
  • Organic oxide
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Primary alcohol
  • Carbonyl group
  • Alcohol
  • Organooxygen compound
  • Organonitrogen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.53ALOGPS
logP-0.046ChemAxon
logS-2.8ALOGPS
pKa (Strongest Acidic)12.21ChemAxon
pKa (Strongest Basic)8.64ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count9ChemAxon
Hydrogen Donor Count6ChemAxon
Polar Surface Area162.73 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity133.5 m³·mol⁻¹ChemAxon
Polarizability53.32 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00040100
Chemspider ID24675511
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound46878353
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Kerber VA, Passos CS, Verli H, Fett-Neto AG, Quirion JP, Henriques AT: Psychollatine, a glucosidic monoterpene indole alkaloid from Psychotria umbellata. J Nat Prod. 2008 Apr;71(4):697-700. doi: 10.1021/np0703951. Epub 2008 Feb 21. [PubMed:18288808 ]
  2. Fragoso V, do Nascimento NC, Moura DJ, e Silva AC, Richter MF, Saffi J, Fett-Neto AG: Antioxidant and antimutagenic properties of the monoterpene indole alkaloid psychollatine and the crude foliar extract of Psychotria umbellata Vell. Toxicol In Vitro. 2008 Apr;22(3):559-66. doi: 10.1016/j.tiv.2007.11.010. Epub 2007 Nov 19. [PubMed:18093795 ]
  3. Both FL, Meneghini L, Kerber VA, Henriques AT, Elisabetsky E: Role of glutamate and dopamine receptors in the psychopharmacological profile of the indole alkaloid psychollatine. J Nat Prod. 2006 Mar;69(3):342-5. doi: 10.1021/np050291v. [PubMed:16562831 ]
  4. Both FL, Meneghini L, Kerber VA, Henriques AT, Elisabetsky E: Psychopharmacological profile of the alkaloid psychollatine as a 5HT2A/C serotonin modulator. J Nat Prod. 2005 Mar;68(3):374-80. doi: 10.1021/np049695y. [PubMed:15787439 ]
  5. Paranhos JT, Fragoso V, Henriques AT, Ferreira AG, Fett-Neto AG: Regeneration of Psychotria umbellata and production of the analgesic indole alkaloid umbellatine. Tree Physiol. 2005 Feb;25(2):251-5. doi: 10.1093/treephys/25.2.251. [PubMed:15574407 ]
  6. LOTUS database [Link]