NP-MRD: Showing NP-Card for 4,8-dihydroxy-3,6-dimethyl-9-methylidene-decahydroazuleno[4,5-b]furan-2-one (NP0148314)

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Record Information

Version

2.0

Created at

2022-09-02 04:02:52 UTC

Updated at

2022-09-02 04:02:52 UTC

NP-MRD ID

NP0148314

Secondary Accession Numbers

None

Natural Product Identification

Common Name

4,8-dihydroxy-3,6-dimethyl-9-methylidene-decahydroazuleno[4,5-b]furan-2-one

Description

Absindiol belongs to the class of organic compounds known as guaianolides and derivatives. These are diterpene lactones with a structure characterized by the presence of a gamma-lactone fused to a guaiane, forming 3,6,9-trimethyl-azuleno[4,5-b]furan-2-one or a derivative. Absindiol is an extremely weak basic (essentially neutral) compound (based on its pKa). Outside of the human body, Absindiol has been detected, but not quantified in, alcoholic beverages and herbs and spices. 4,8-dihydroxy-3,6-dimethyl-9-methylidene-decahydroazuleno[4,5-b]furan-2-one is found in Artemisia absinthium. This could make absindiol a potential biomarker for the consumption of these foods.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 41 43  0  0  0  0  0  0  0  0999 V2000
    1.0123   -2.3002   -1.5561 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5253   -1.4705   -0.6852 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9585   -0.9982   -0.7962 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.7286   -1.5615    0.2422 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7844    0.4586   -0.4599 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7057    0.4892    0.6334 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.9755    1.7559    0.4991 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4964    2.3363    1.8369 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0785    1.8385   -0.5523 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3995    1.2287   -0.1402 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.4450    1.8175   -0.8161 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2623   -0.2531   -0.4301 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.5432   -0.9863   -0.4421 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.6716   -0.3029    0.2825 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2254   -2.2308    0.3023 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0551   -3.1445    0.5821 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8726   -2.2044    0.6274 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4434   -0.8335    0.6629 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0168   -0.8029    0.5269 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.0099   -2.6456   -1.4693 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5776   -2.6889   -2.4120 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3836   -1.1696   -1.7811 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8990   -2.5080    0.0556 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3440    0.9524   -1.3635 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6982    0.9642   -0.1557 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2940    0.5491    1.5851 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7448    2.5357    0.1809 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4475    2.5371    2.4134 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0321    3.3092    1.6678 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0876    1.6561    2.4361 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2555    2.9104   -0.8219 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2759    1.3199   -1.4455 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5200    1.3988    0.9315 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0820    2.1565   -1.6877 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7356   -0.3944   -1.3996 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8492   -1.2625   -1.4931 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4254   -0.0053   -0.4826 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3675    0.5345    0.9076 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2166   -1.0212    0.9637 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7654   -0.5029    1.6773 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4111   -1.4615    1.3757 H   0  0  0  0  0  0  0  0  0  0  0  0
 14 13  1  0
 13 12  1  0
 12 18  1  0
 18 17  1  0
 17 15  1  0
 15 16  2  0
 18 19  1  0
 19  6  1  0
  6  5  1  0
  5  3  1  0
  3  4  1  0
  3  2  1  0
  2  1  2  3
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 15 13  1  0
  2 19  1  0
 10 12  1  0
 14 37  1  0
 14 38  1  0
 14 39  1  0
 13 36  1  6
 12 35  1  6
 18 40  1  1
 19 41  1  1
  6 26  1  1
  5 24  1  0
  5 25  1  0
  3 22  1  6
  4 23  1  0
  1 20  1  0
  1 21  1  0
  7 27  1  6
  8 28  1  0
  8 29  1  0
  8 30  1  0
  9 31  1  0
  9 32  1  0
 10 33  1  1
 11 34  1  0
M  END


  Mrv0541 05061307002D          

 19 21  0  0  0  0            999 V2000
    3.6754   -0.1941    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8642    3.2305    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1007    0.9600    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2871   -0.0377    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9864    1.4145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0304    0.3203    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1541    2.4581    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5878    1.4145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2140    1.1246    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9493    2.2387    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5438    0.3203    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6996    1.7696    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3602    1.1246    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8746    1.7696    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6248    2.2387    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5944    2.7530    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8988   -0.1941    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0202    2.7530    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4201    2.4581    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  6  1  1  0  0  0  0
  6  4  1  0  0  0  0
  7  2  2  0  0  0  0
  8  3  1  0  0  0  0
  9  5  1  0  0  0  0
  9  6  1  0  0  0  0
 10  5  1  0  0  0  0
 10  7  1  0  0  0  0
 11  4  1  0  0  0  0
 12  7  1  0  0  0  0
 12  9  1  0  0  0  0
 13  8  1  0  0  0  0
 13 11  1  0  0  0  0
 14 12  1  0  0  0  0
 14 13  1  0  0  0  0
 15  8  1  0  0  0  0
 16 10  1  0  0  0  0
 17 11  1  0  0  0  0
 18 15  2  0  0  0  0
 19 14  1  0  0  0  0
 19 15  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0148314

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC1C2C(OC1=O)C1C(CC(O)C1=C)C(C)CC2O

> <INCHI_IDENTIFIER>
InChI=1S/C15H22O4/c1-6-4-11(17)13-8(3)15(18)19-14(13)12-7(2)10(16)5-9(6)12/h6,8-14,16-17H,2,4-5H2,1,3H3

> <INCHI_KEY>
IBIJTDJAWRYXRF-UHFFFAOYSA-N

> <FORMULA>
C15H22O4

> <MOLECULAR_WEIGHT>
266.3328

> <EXACT_MASS>
266.151809192

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_AVERAGE_POLARIZABILITY>
28.9972078291772

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
4,8-dihydroxy-3,6-dimethyl-9-methylidene-dodecahydroazuleno[4,5-b]furan-2-one

> <ALOGPS_LOGP>
0.53

> <JCHEM_LOGP>
0.7052734569999992

> <ALOGPS_LOGS>
-1.35

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
15.034494874439225

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.405351759647715

> <JCHEM_PKA_STRONGEST_BASIC>
-2.8736275694041575

> <JCHEM_POLAR_SURFACE_AREA>
66.76

> <JCHEM_REFRACTIVITY>
69.4767

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.18e+01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
4,8-dihydroxy-3,6-dimethyl-9-methylidene-decahydroazuleno[4,5-b]furan-2-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0       6.861  -0.362   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       5.347   6.030   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -0.188   1.792   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.269  -0.070   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       7.441   2.640   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       5.657   0.598   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.888   4.588   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.097   2.640   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       5.999   2.099   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       7.372   4.179   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.882   0.598   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       5.039   3.303   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.539   2.099   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       3.499   3.303   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       1.166   4.179   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       8.576   5.139   0.000  0.00  0.00           O+0
HETATM   17  O   UNK     0       1.678  -0.362   0.000  0.00  0.00           O+0
HETATM   18  O   UNK     0      -0.038   5.139   0.000  0.00  0.00           O+0
HETATM   19  O   UNK     0       2.651   4.588   0.000  0.00  0.00           O+0
CONECT    1    6                                                            
CONECT    2    7                                                            
CONECT    3    8                                                            
CONECT    4    6   11                                                       
CONECT    5    9   10                                                       
CONECT    6    1    4    9                                                  
CONECT    7    2   10   12                                                  
CONECT    8    3   13   15                                                  
CONECT    9    5    6   12                                                  
CONECT   10    5    7   16                                                  
CONECT   11    4   13   17                                                  
CONECT   12    7    9   14                                                  
CONECT   13    8   11   14                                                  
CONECT   14   12   13   19                                                  
CONECT   15    8   18   19                                                  
CONECT   16   10                                                            
CONECT   17   11                                                            
CONECT   18   15                                                            
CONECT   19   14   15                                                       
MASTER        0    0    0    0    0    0    0    0   19    0   42    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₅H₂₂O₄

Average Mass

266.3328 Da

Monoisotopic Mass

266.15181 Da

IUPAC Name

4,8-dihydroxy-3,6-dimethyl-9-methylidene-dodecahydroazuleno[4,5-b]furan-2-one

Traditional Name

4,8-dihydroxy-3,6-dimethyl-9-methylidene-decahydroazuleno[4,5-b]furan-2-one

CAS Registry Number

Not Available

SMILES

CC1C2C(OC1=O)C1C(CC(O)C1=C)C(C)CC2O

InChI Identifier

InChI=1S/C15H22O4/c1-6-4-11(17)13-8(3)15(18)19-14(13)12-7(2)10(16)5-9(6)12/h6,8-14,16-17H,2,4-5H2,1,3H3

InChI Key

IBIJTDJAWRYXRF-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Artemisia absinthium	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as guaianolides and derivatives. These are diterpene lactones with a structure characterized by the presence of a gamma-lactone fused to a guaiane, forming 3,6,9-trimethyl-azuleno[4,5-b]furan-2-one or a derivative.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Terpene lactones

Direct Parent

Guaianolides and derivatives

Alternative Parents

Substituents

Guaianolide-skeleton
Guaiane sesquiterpenoid
Sesquiterpenoid
Gamma butyrolactone
Cyclic alcohol
Tetrahydrofuran
Carboxylic acid ester
Secondary alcohol
Lactone
Carboxylic acid derivative
Oxacycle
Organoheterocyclic compound
Monocarboxylic acid or derivatives
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Carbonyl group
Organooxygen compound
Alcohol
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.53	ALOGPS
logP	0.71	ChemAxon
logS	-1.4	ALOGPS
pKa (Strongest Acidic)	14.41	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	66.76 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	69.48 m³·mol⁻¹	ChemAxon
Polarizability	29 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

HMDB0033229

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

FDB011244

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

131751394

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 4,8-dihydroxy-3,6-dimethyl-9-methylidene-decahydroazuleno[4,5-b]furan-2-one (NP0148314)

MOL for NP0148314 (4,8-dihydroxy-3,6-dimethyl-9-methylidene-decahydroazuleno[4,5-b]furan-2-one)

3D MOL for NP0148314 (4,8-dihydroxy-3,6-dimethyl-9-methylidene-decahydroazuleno[4,5-b]furan-2-one)

3D SDF for NP0148314 (4,8-dihydroxy-3,6-dimethyl-9-methylidene-decahydroazuleno[4,5-b]furan-2-one)

3D-SDF for NP0148314 (4,8-dihydroxy-3,6-dimethyl-9-methylidene-decahydroazuleno[4,5-b]furan-2-one)

PDB for NP0148314 (4,8-dihydroxy-3,6-dimethyl-9-methylidene-decahydroazuleno[4,5-b]furan-2-one)

3D PDB for NP0148314 (4,8-dihydroxy-3,6-dimethyl-9-methylidene-decahydroazuleno[4,5-b]furan-2-one)

SMILES for NP0148314 (4,8-dihydroxy-3,6-dimethyl-9-methylidene-decahydroazuleno[4,5-b]furan-2-one)

INCHI for NP0148314 (4,8-dihydroxy-3,6-dimethyl-9-methylidene-decahydroazuleno[4,5-b]furan-2-one)

Structure for NP0148314 (4,8-dihydroxy-3,6-dimethyl-9-methylidene-decahydroazuleno[4,5-b]furan-2-one)

3D Structure for NP0148314 (4,8-dihydroxy-3,6-dimethyl-9-methylidene-decahydroazuleno[4,5-b]furan-2-one)