NP-MRD: Showing NP-Card for icas#9 (NP0147228)

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Record Information

Version

2.0

Created at

2022-09-02 02:47:25 UTC

Updated at

2022-09-02 02:47:25 UTC

NP-MRD ID

NP0147228

Secondary Accession Numbers

None

Natural Product Identification

Common Name

icas#9

Description

Icas#9 belongs to the class of organic compounds known as indolecarboxylic acids and derivatives. Indolecarboxylic acids and derivatives are compounds containing a carboxylic acid group (or a derivative thereof) linked to an indole. Thus, icas#9 is considered to be a fatty acyl glycoside. Icas#9 is a secondary metabolite. Secondary metabolites are metabolically or physiologically non-essential metabolites that may serve a role as defense or signalling molecules. In some cases they are simply molecules that arise from the incomplete metabolism of other secondary metabolites. icas#9 is found in Caenorhabditis elegans. icas#9 was first documented in 2012 (PMID: 22701701). Based on a literature review a small amount of articles have been published on icas#9 (PMID: 27799655) (PMID: 27381649).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309022204472D          

 28 30  0  0  1  0            999 V2000
    3.7710   -0.3075    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4855   -0.7200    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.2000   -0.3075    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9145   -0.7200    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.6289   -0.3075    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3434   -0.7200    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.3434   -1.5450    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0579   -0.3075    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7723   -0.7200    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4868   -0.3075    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2013   -0.7200    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.4868    0.5175    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9145   -1.5450    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.6289   -1.9575    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2000   -1.9575    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4855   -1.5450    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7710   -1.9575    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0566   -1.5450    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0566   -0.7200    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3421   -1.9575    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2559   -2.7780    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4489   -2.9495    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.0364   -2.2350    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2294   -2.0635    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0255   -1.2789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5265   -0.6658    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3335   -0.8373    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5884   -1.6219    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  6  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  1  0  0  0
  5  6  1  0  0  0  0
  6  7  1  1  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
  4 13  1  0  0  0  0
 13 14  1  6  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
  2 16  1  0  0  0  0
 16 17  1  1  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 18 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 26 27  1  0  0  0  0
 27 28  2  0  0  0  0
 20 28  1  0  0  0  0
 23 28  1  0  0  0  0
M  END

     RDKit          3D

 53 55  0  0  0  0  0  0  0  0999 V2000
    0.0862    1.5492   -0.3477 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0351    0.5064    0.7254 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1900    0.1442    1.2836 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8199   -0.8550    0.5428 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.0841   -1.0226    1.0855 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0979   -0.7530    0.1621 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.9234   -1.9836   -0.0834 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8812    0.4064    0.6796 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9789    0.8440   -0.2649 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7289    1.9946    0.2893 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5939    1.8647    1.2047 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4806    3.2635   -0.2071 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0694   -2.1628    0.6906 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.0206   -2.7708   -0.5814 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4036   -1.8670    1.0288 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7763   -0.7031    0.1846 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.1338   -0.3856    0.1198 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8901   -0.2982   -1.0104 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2894   -0.5314   -2.0984 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3065    0.0366   -1.0587 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0887    0.1245   -2.1922 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3481    0.4556   -1.8615 N   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4383    0.5946   -0.5265 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4934    0.9220    0.3162 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2552    0.9838    1.6678 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9817    0.7228    2.1737 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9397    0.3988    1.3331 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1701    0.3355   -0.0144 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2888    2.5458    0.0672 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8697    1.2165   -1.0621 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8885    1.5336   -0.9159 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6254    0.9588    1.5735 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9498   -0.5457   -0.5164 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6293   -0.4583   -0.8174 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4567   -1.8990   -1.0720 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6259   -2.2173    0.7286 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2414   -2.8429   -0.1875 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3743    0.1283    1.6391 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2004    1.2500    0.8535 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6600    0.0021   -0.5228 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5266    1.1622   -1.2245 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0132    4.0805    0.0331 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5221   -2.8482    1.4157 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6438   -2.3412   -1.2156 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4714   -1.7102    2.1117 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9375   -2.8070    0.7930 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3295   -0.8903   -0.8358 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7421   -0.0487   -3.2169 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1863    0.6012   -2.4907 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.4716    1.1212   -0.0856 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0283    1.2327    2.3932 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7953    0.7734    3.2505 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9310    0.1885    1.6945 H   0  0  0  0  0  0  0  0  0  0  0  0
  7  6  1  0
  6  8  1  0
  8  9  1  0
  9 10  1  0
 10 12  1  0
 10 11  2  0
  6  5  1  0
  5  4  1  0
  4  3  1  0
  3  2  1  0
  2  1  1  0
  2 16  1  0
 16 15  1  0
 15 13  1  0
 13 14  1  0
 16 17  1  0
 17 18  1  0
 18 19  2  0
 18 20  1  0
 20 21  2  0
 21 22  1  0
 22 23  1  0
 23 24  2  0
 24 25  1  0
 25 26  2  0
 26 27  1  0
 27 28  2  0
 13  4  1  0
 28 20  1  0
 28 23  1  0
  7 35  1  0
  7 36  1  0
  7 37  1  0
  6 34  1  6
  8 38  1  0
  8 39  1  0
  9 40  1  0
  9 41  1  0
 12 42  1  0
  4 33  1  6
  2 32  1  1
  1 29  1  0
  1 30  1  0
  1 31  1  0
 16 47  1  6
 15 45  1  0
 15 46  1  0
 13 43  1  1
 14 44  1  0
 21 48  1  0
 22 49  1  0
 24 50  1  0
 25 51  1  0
 26 52  1  0
 27 53  1  0
M  END


  Mrv1652309022204472D          

 28 30  0  0  1  0            999 V2000
    3.7710   -0.3075    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4855   -0.7200    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.2000   -0.3075    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9145   -0.7200    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.6289   -0.3075    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3434   -0.7200    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.3434   -1.5450    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0579   -0.3075    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7723   -0.7200    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4868   -0.3075    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2013   -0.7200    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.4868    0.5175    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9145   -1.5450    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.6289   -1.9575    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2000   -1.9575    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4855   -1.5450    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7710   -1.9575    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0566   -1.5450    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0566   -0.7200    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3421   -1.9575    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2559   -2.7780    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4489   -2.9495    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.0364   -2.2350    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2294   -2.0635    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0255   -1.2789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5265   -0.6658    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3335   -0.8373    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5884   -1.6219    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  6  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  1  0  0  0
  5  6  1  0  0  0  0
  6  7  1  1  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 10 12  1  0  0  0  0
  4 13  1  0  0  0  0
 13 14  1  6  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
  2 16  1  0  0  0  0
 16 17  1  1  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 18 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
 26 27  1  0  0  0  0
 27 28  2  0  0  0  0
 20 28  1  0  0  0  0
 23 28  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0147228

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@H](CCC(O)=O)O[C@@H]1O[C@@H](C)[C@@H](C[C@H]1O)OC(=O)C1=CNC2=CC=CC=C12

> <INCHI_IDENTIFIER>
InChI=1S/C20H25NO7/c1-11(7-8-18(23)24)26-20-16(22)9-17(12(2)27-20)28-19(25)14-10-21-15-6-4-3-5-13(14)15/h3-6,10-12,16-17,20-22H,7-9H2,1-2H3,(H,23,24)/t11-,12+,16-,17-,20-/m1/s1

> <INCHI_KEY>
GIZBXORWWXIWKX-VEZRURDRSA-N

> <FORMULA>
C20H25NO7

> <MOLECULAR_WEIGHT>
391.42

> <EXACT_MASS>
391.163102149

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
53

> <JCHEM_AVERAGE_POLARIZABILITY>
40.45038162233614

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(4R)-4-{[(2R,3R,5R,6S)-3-hydroxy-5-(1H-indole-3-carbonyloxy)-6-methyloxan-2-yl]oxy}pentanoic acid

> <ALOGPS_LOGP>
1.84

> <JCHEM_LOGP>
2.4620860493333323

> <ALOGPS_LOGS>
-2.83

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
12.14745390778807

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.273511700959061

> <JCHEM_PKA_STRONGEST_BASIC>
-3.5296383218993883

> <JCHEM_POLAR_SURFACE_AREA>
118.08000000000001

> <JCHEM_REFRACTIVITY>
98.90010000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
8

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
5.79e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(4R)-4-{[(2R,3R,5R,6S)-3-hydroxy-5-(1H-indole-3-carbonyloxy)-6-methyloxan-2-yl]oxy}pentanoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 02-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   02-SEP-22         0                                  
HETATM    1  C   UNK     0       7.039  -0.574   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       8.373  -1.344   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       9.707  -0.574   0.000  0.00  0.00           O+0
HETATM    4  C   UNK     0      11.040  -1.344   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0      12.374  -0.574   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0      13.708  -1.344   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      13.708  -2.884   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      15.041  -0.574   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      16.375  -1.344   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      17.709  -0.574   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0      19.042  -1.344   0.000  0.00  0.00           O+0
HETATM   12  O   UNK     0      17.709   0.966   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0      11.040  -2.884   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0      12.374  -3.654   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       9.707  -3.654   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       8.373  -2.884   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       7.039  -3.654   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       5.706  -2.884   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       5.706  -1.344   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       4.372  -3.654   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       4.211  -5.186   0.000  0.00  0.00           C+0
HETATM   22  N   UNK     0       2.705  -5.506   0.000  0.00  0.00           N+0
HETATM   23  C   UNK     0       1.935  -4.172   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       0.428  -3.852   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -0.048  -2.387   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       0.983  -1.243   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       2.489  -1.563   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       2.965  -3.028   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   16                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5   13                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10                                                            
CONECT   13    4   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16                                                       
CONECT   16   15    2   17                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   21   28                                                  
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24   28                                                  
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   20   23                                                  
MASTER        0    0    0    0    0    0    0    0   28    0   60    0
END

View in JSmol

Synonyms

Value	Source
(4R)-4-{[3,6-dideoxy-4-O-(1H-indol-3-ylcarbonyl)-alpha-L-arabino-hexopyranosyl]oxy}valeric acid	ChEBI
(4R)-4-{[3,6-dideoxy-4-O-(1H-indol-3-ylcarbonyl)-a-L-arabino-hexopyranosyl]oxy}valerate	Generator
(4R)-4-{[3,6-dideoxy-4-O-(1H-indol-3-ylcarbonyl)-a-L-arabino-hexopyranosyl]oxy}valeric acid	Generator
(4R)-4-{[3,6-dideoxy-4-O-(1H-indol-3-ylcarbonyl)-alpha-L-arabino-hexopyranosyl]oxy}valerate	Generator
(4R)-4-{[3,6-dideoxy-4-O-(1H-indol-3-ylcarbonyl)-α-L-arabino-hexopyranosyl]oxy}valerate	Generator
(4R)-4-{[3,6-dideoxy-4-O-(1H-indol-3-ylcarbonyl)-α-L-arabino-hexopyranosyl]oxy}valeric acid	Generator

Chemical Formula

C₂₀H₂₅NO₇

Average Mass

391.4200 Da

Monoisotopic Mass

391.16310 Da

IUPAC Name

(4R)-4-{[(2R,3R,5R,6S)-3-hydroxy-5-(1H-indole-3-carbonyloxy)-6-methyloxan-2-yl]oxy}pentanoic acid

Traditional Name

(4R)-4-{[(2R,3R,5R,6S)-3-hydroxy-5-(1H-indole-3-carbonyloxy)-6-methyloxan-2-yl]oxy}pentanoic acid

CAS Registry Number

Not Available

SMILES

C[C@H](CCC(O)=O)O[C@@H]1O[C@@H](C)[C@@H](C[C@H]1O)OC(=O)C1=CNC2=CC=CC=C12

InChI Identifier

InChI=1S/C20H25NO7/c1-11(7-8-18(23)24)26-20-16(22)9-17(12(2)27-20)28-19(25)14-10-21-15-6-4-3-5-13(14)15/h3-6,10-12,16-17,20-22H,7-9H2,1-2H3,(H,23,24)/t11-,12+,16-,17-,20-/m1/s1

InChI Key

GIZBXORWWXIWKX-VEZRURDRSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Caenorhabditis elegans	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as indolecarboxylic acids and derivatives. Indolecarboxylic acids and derivatives are compounds containing a carboxylic acid group (or a derivative thereof) linked to an indole.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Indoles and derivatives

Sub Class

Indolecarboxylic acids and derivatives

Direct Parent

Indolecarboxylic acids and derivatives

Alternative Parents

Substituents

Hexose monosaccharide
Indolecarboxylic acid derivative
Indole
Pyrrole-3-carboxylic acid or derivatives
Sugar acid
Dicarboxylic acid or derivatives
Monosaccharide
Oxane
Substituted pyrrole
Benzenoid
Heteroaromatic compound
Pyrrole
Vinylogous amide
Secondary alcohol
Carboxylic acid ester
Oxacycle
Azacycle
Carboxylic acid derivative
Carboxylic acid
Acetal
Hydrocarbon derivative
Organic oxygen compound
Organic nitrogen compound
Organopnictogen compound
Alcohol
Organonitrogen compound
Organooxygen compound
Organic oxide
Carbonyl group
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

monocarboxylic acid (CHEBI:79028 )
(omega-1)-hydroxy fatty acid ascaroside (CHEBI:79028 )
4-O-(1H-indol-3-ylcarbonyl)ascaroside (CHEBI:79028 )

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.84	ALOGPS
logP	2.46	ChemAxon
logS	-2.8	ALOGPS
pKa (Strongest Acidic)	4.27	ChemAxon
pKa (Strongest Basic)	-3.5	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	118.08 Å²	ChemAxon
Rotatable Bond Count	8	ChemAxon
Refractivity	98.9 m³·mol⁻¹	ChemAxon
Polarizability	40.45 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00001165

Chemspider ID

31150666

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

ICAS

METLIN ID

Not Available

PubChem Compound

44205804

PDB ID

Not Available

ChEBI ID

79028

Good Scents ID

Not Available

References

General References

Kaplan F, Alborn HT, von Reuss SH, Ajredini R, Ali JG, Akyazi F, Stelinski LL, Edison AS, Schroeder FC, Teal PE: Interspecific nematode signals regulate dispersal behavior. PLoS One. 2012;7(6):e38735. doi: 10.1371/journal.pone.0038735. Epub 2012 Jun 6. [PubMed:22701701 ]
Greene JS, Brown M, Dobosiewicz M, Ishida IG, Macosko EZ, Zhang X, Butcher RA, Cline DJ, McGrath PT, Bargmann CI: Balancing selection shapes density-dependent foraging behaviour. Nature. 2016 Nov 10;539(7628):254-258. doi: 10.1038/nature19848. Epub 2016 Oct 31. [PubMed:27799655 ]
Dong C, Dolke F, von Reuss SH: Selective MS screening reveals a sex pheromone in Caenorhabditis briggsae and species-specificity in indole ascaroside signalling. Org Biomol Chem. 2016 Aug 14;14(30):7217-25. doi: 10.1039/c6ob01230b. Epub 2016 Jul 6. [PubMed:27381649 ]
LOTUS database [Link]

Showing NP-Card for icas#9 (NP0147228)

MOL for NP0147228 (icas#9)

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3D-SDF for NP0147228 (icas#9)

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3D PDB for NP0147228 (icas#9)

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Structure for NP0147228 (icas#9)

3D Structure for NP0147228 (icas#9)