NP-MRD: Showing NP-Card for 4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate (NP0147135)

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Record Information

Version

2.0

Created at

2022-09-02 02:40:43 UTC

Updated at

2022-09-02 02:40:43 UTC

NP-MRD ID

NP0147135

Secondary Accession Numbers

None

Natural Product Identification

Common Name

4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate

Description

4,5-Dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)-4H-chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate belongs to the class of organic compounds known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose. 4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate is found in Aloe peglerae. Based on a literature review very few articles have been published on 4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)-4H-chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309022204402D          

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M  END

     RDKit          3D

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M  END


  Mrv1652309022204402D          

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 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 19 22  1  0  0  0  0
 22 23  1  0  0  0  0
 22 24  1  0  0  0  0
 24 25  1  0  0  0  0
 24 26  1  0  0  0  0
 17 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
 30 28  1  4  0  0  0
 30 31  2  0  0  0  0
 31 32  1  0  0  0  0
 32 33  2  0  0  0  0
 33 34  1  0  0  0  0
 34 35  2  0  0  0  0
 35 36  1  0  0  0  0
 36 37  2  0  0  0  0
 32 37  1  0  0  0  0
 15 38  2  0  0  0  0
  9 38  1  0  0  0  0
 38 39  1  0  0  0  0
  5 39  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0147135

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(=O)CC1=CC(=O)C2=C(C)C=C(O)C(OC3OC(CO)C(O)C(O)C3OC(=O)C=CC3=CC=CC=C3)=C2O1

> <INCHI_IDENTIFIER>
InChI=1S/C28H28O11/c1-14-10-19(32)25(26-22(14)18(31)12-17(36-26)11-15(2)30)39-28-27(24(35)23(34)20(13-29)37-28)38-21(33)9-8-16-6-4-3-5-7-16/h3-10,12,20,23-24,27-29,32,34-35H,11,13H2,1-2H3

> <INCHI_KEY>
NYOPZPSMCHXQQI-UHFFFAOYSA-N

> <FORMULA>
C28H28O11

> <MOLECULAR_WEIGHT>
540.521

> <EXACT_MASS>
540.163161722

> <JCHEM_ACCEPTOR_COUNT>
10

> <JCHEM_ATOM_COUNT>
67

> <JCHEM_AVERAGE_POLARIZABILITY>
53.2836719966848

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)-4H-chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate

> <ALOGPS_LOGP>
1.77

> <JCHEM_LOGP>
2.2314802526666666

> <ALOGPS_LOGS>
-3.55

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.69331262118476

> <JCHEM_PKA_STRONGEST_ACIDIC>
7.047858579090149

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9810930139531244

> <JCHEM_POLAR_SURFACE_AREA>
169.04999999999998

> <JCHEM_REFRACTIVITY>
137.4088

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.52e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 02-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   02-SEP-22         0                                  
HETATM    1  C   UNK     0      -2.667  -3.080   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0      -1.334  -0.770   0.000  0.00  0.00           O+0
HETATM    4  C   UNK     0       0.000  -3.080   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       2.667   1.540   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       5.335   1.540   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       6.668  -0.770   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.668  -2.310   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       8.002  -3.080   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       5.335  -3.080   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       5.335  -4.620   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0       6.668  -5.390   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0       8.002  -4.620   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0       9.336  -5.390   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      10.669  -4.620   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0      12.003  -5.390   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       9.336  -6.930   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      10.669  -7.700   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       8.002  -7.700   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       8.002  -9.240   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       6.668  -6.930   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       5.335  -7.700   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0       5.335  -9.240   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0       4.001 -10.010   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0       6.668 -10.010   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       6.668 -11.550   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       5.335 -12.320   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       5.335 -13.860   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       4.001 -14.630   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0       2.667 -13.860   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0       2.667 -12.320   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0       4.001 -11.550   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   39  O   UNK     0       2.667  -3.080   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6   39                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10   38                                                  
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13                                                       
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16   38                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18   26                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20   22                                                  
CONECT   20   19   21                                                       
CONECT   21   20                                                            
CONECT   22   19   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   17   27                                                  
CONECT   27   26   28                                                       
CONECT   28   27   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   33   37                                                  
CONECT   33   32   34                                                       
CONECT   34   33   35                                                       
CONECT   35   34   36                                                       
CONECT   36   35   37                                                       
CONECT   37   36   32                                                       
CONECT   38   15    9   39                                                  
CONECT   39   38    5                                                       
MASTER        0    0    0    0    0    0    0    0   39    0   84    0
END

View in JSmol

Synonyms

Value	Source
4,5-Dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)-4H-chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoic acid	Generator

Chemical Formula

C₂₈H₂₈O₁₁

Average Mass

540.5210 Da

Monoisotopic Mass

540.16316 Da

IUPAC Name

4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)-4H-chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate

Traditional Name

4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate

CAS Registry Number

Not Available

SMILES

CC(=O)CC1=CC(=O)C2=C(C)C=C(O)C(OC3OC(CO)C(O)C(O)C3OC(=O)C=CC3=CC=CC=C3)=C2O1

InChI Identifier

InChI=1S/C28H28O11/c1-14-10-19(32)25(26-22(14)18(31)12-17(36-26)11-15(2)30)39-28-27(24(35)23(34)20(13-29)37-28)38-21(33)9-8-16-6-4-3-5-7-16/h3-10,12,20,23-24,27-29,32,34-35H,11,13H2,1-2H3

InChI Key

NYOPZPSMCHXQQI-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Aloe peglerae	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as phenolic glycosides. These are organic compounds containing a phenolic structure attached to a glycosyl moiety. Some examples of phenolic structures include lignans, and flavonoids. Among the sugar units found in natural glycosides are D-glucose, L-Fructose, and L rhamnose.

Kingdom

Organic compounds

Super Class

Organic oxygen compounds

Class

Organooxygen compounds

Sub Class

Carbohydrates and carbohydrate conjugates

Direct Parent

Phenolic glycosides

Alternative Parents

Substituents

Phenolic glycoside
Cinnamic acid or derivatives
Cinnamic acid ester
Hexose monosaccharide
O-glycosyl compound
Chromone
1-benzopyran
Benzopyran
Styrene
Fatty acid ester
1-hydroxy-2-unsubstituted benzenoid
Pyranone
Monosaccharide
Fatty acyl
Monocyclic benzene moiety
Oxane
Pyran
Benzenoid
Heteroaromatic compound
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Ketone
Carboxylic acid ester
Secondary alcohol
Monocarboxylic acid or derivatives
Organoheterocyclic compound
Oxacycle
Acetal
Carboxylic acid derivative
Alcohol
Carbonyl group
Hydrocarbon derivative
Organic oxide
Primary alcohol
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.77	ALOGPS
logP	2.23	ChemAxon
logS	-3.6	ALOGPS
pKa (Strongest Acidic)	7.05	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	10	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	169.05 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	137.41 m³·mol⁻¹	ChemAxon
Polarizability	53.28 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162956519

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate (NP0147135)

MOL for NP0147135 (4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate)

3D MOL for NP0147135 (4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate)

3D SDF for NP0147135 (4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate)

3D-SDF for NP0147135 (4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate)

PDB for NP0147135 (4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate)

3D PDB for NP0147135 (4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate)

SMILES for NP0147135 (4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate)

INCHI for NP0147135 (4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate)

Structure for NP0147135 (4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate)

3D Structure for NP0147135 (4,5-dihydroxy-2-{[7-hydroxy-5-methyl-4-oxo-2-(2-oxopropyl)chromen-8-yl]oxy}-6-(hydroxymethyl)oxan-3-yl 3-phenylprop-2-enoate)