Np mrd loader

Record Information
Version2.0
Created at2022-09-02 01:57:34 UTC
Updated at2022-09-02 01:57:34 UTC
NP-MRD IDNP0146544
Secondary Accession NumbersNone
Natural Product Identification
Common Nameelloramycin a
DescriptionElloramycin A belongs to the class of organic compounds known as tetracenequinones. These are polyaromatic hydrocarbon derivatives containing a tetracyclic cycle made up of four linearly fused benzene rings, one of which bears two ketone groups at position 1 and 4. Elloramycin A is a primary metabolite. Primary metabolites are metabolically or physiologically essential metabolites. They are directly involved in an organism’s growth, development or reproduction. elloramycin a is found in Streptomyces olivaceus. elloramycin a was first documented in 2001 (PMID: 11376004). Based on a literature review a small amount of articles have been published on elloramycin A (PMID: 19233921) (PMID: 11306350) (PMID: 11325225) (PMID: 18310024).
Structure
Thumb
Synonyms
ValueSource
ElloramycinChEBI
Elloramycin CMeSH
Elloramycin DMeSH
Elloramycin bMeSH
Elloramycin eMeSH
Elloramycin FMeSH
Chemical FormulaC32H36O15
Average Mass660.6250 Da
Monoisotopic Mass660.20542 Da
IUPAC Namemethyl (6aR,7S,10aR)-6a,7,12-trihydroxy-8,10a-dimethoxy-1-methyl-6,10,11-trioxo-3-{[(2S,3R,4R,5S,6S)-3,4,5-trimethoxy-6-methyloxan-2-yl]oxy}-6,6a,7,10,10a,11-hexahydrotetracene-2-carboxylate
Traditional Namemethyl (6aR,7S,10aR)-6a,7,12-trihydroxy-8,10a-dimethoxy-1-methyl-6,10,11-trioxo-3-{[(2S,3R,4R,5S,6S)-3,4,5-trimethoxy-6-methyloxan-2-yl]oxy}-7H-tetracene-2-carboxylate
CAS Registry NumberNot Available
SMILES
CO[C@H]1[C@H](C)O[C@@H](OC2=C(C(=O)OC)C(C)=C3C(O)=C4C(=O)[C@]5(OC)C(=O)C=C(OC)[C@@H](O)[C@]5(O)C(=O)C4=CC3=C2)[C@H](OC)[C@@H]1OC
InChI Identifier
InChI=1S/C32H36O15/c1-12-19-14(10-16(20(12)29(38)44-7)47-30-25(43-6)24(42-5)23(41-4)13(2)46-30)9-15-21(22(19)34)28(37)32(45-8)18(33)11-17(40-3)27(36)31(32,39)26(15)35/h9-11,13,23-25,27,30,34,36,39H,1-8H3/t13-,23-,24+,25+,27+,30-,31+,32+/m0/s1
InChI KeyOYEXGNNKRQPUBW-FJYHMNRNSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Streptomyces olivaceusLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as tetracenequinones. These are polyaromatic hydrocarbon derivatives containing a tetracyclic cycle made up of four linearly fused benzene rings, one of which bears two ketone groups at position 1 and 4.
KingdomOrganic compounds
Super ClassBenzenoids
ClassNaphthacenes
Sub ClassTetracenequinones
Direct ParentTetracenequinones
Alternative Parents
Substituents
  • Tetracenequinone
  • Anthracene carboxylic acid
  • Anthracene carboxylic acid or derivatives
  • 9,10-anthraquinone
  • 1,4-anthraquinone
  • Phenolic glycoside
  • 2-naphthalenecarboxylic acid
  • 2-naphthalenecarboxylic acid or derivatives
  • Hexose monosaccharide
  • Glycosyl compound
  • 1-naphthol
  • O-glycosyl compound
  • Naphthalene
  • Tetralin
  • Aryl alkyl ketone
  • Aryl ketone
  • Quinone
  • 1-hydroxy-4-unsubstituted benzenoid
  • Cyclohexenone
  • Oxane
  • Monosaccharide
  • Methyl ester
  • Tertiary alcohol
  • Vinylogous ester
  • Vinylogous acid
  • Ketone
  • 1,2-diol
  • Carboxylic acid ester
  • Secondary alcohol
  • Organoheterocyclic compound
  • Acetal
  • Monocarboxylic acid or derivatives
  • Oxacycle
  • Ether
  • Dialkyl ether
  • Carboxylic acid derivative
  • Polyol
  • Organooxygen compound
  • Organic oxide
  • Organic oxygen compound
  • Carbonyl group
  • Alcohol
  • Hydrocarbon derivative
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.71ALOGPS
logP2.06ChemAxon
logS-3.7ALOGPS
pKa (Strongest Acidic)7.7ChemAxon
pKa (Strongest Basic)-3.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count14ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area202.81 ŲChemAxon
Rotatable Bond Count9ChemAxon
Refractivity161.03 m³·mol⁻¹ChemAxon
Polarizability65.59 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00017718
Chemspider ID8185147
KEGG Compound IDC12381
BioCyc IDCPD-16637
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10009567
PDB IDNot Available
ChEBI ID78288
Good Scents IDNot Available
References
General References
  1. Patallo EP, Blanco G, Fischer C, Brana AF, Rohr J, Mendez C, Salas JA: Deoxysugar methylation during biosynthesis of the antitumor polyketide elloramycin by Streptomyces olivaceus. Characterization of three methyltransferase genes. J Biol Chem. 2001 Jun 1;276(22):18765-74. doi: 10.1074/jbc.M101225200. Epub 2001 Feb 28. [PubMed:11376004 ]
  2. Ramos A, Olano C, Brana AF, Mendez C, Salas JA: Modulation of deoxysugar transfer by the elloramycin glycosyltransferase ElmGT through site-directed mutagenesis. J Bacteriol. 2009 Apr;191(8):2871-5. doi: 10.1128/JB.01747-08. Epub 2009 Feb 20. [PubMed:19233921 ]
  3. Blanco G, Patallo EP, Brana AF, Trefzer A, Bechthold A, Rohr J, Mendez C, Salas JA: Identification of a sugar flexible glycosyltransferase from Streptomyces olivaceus, the producer of the antitumor polyketide elloramycin. Chem Biol. 2001 Mar;8(3):253-63. doi: 10.1016/s1074-5521(01)00010-2. [PubMed:11306350 ]
  4. Rafanan ER Jr, Le L, Zhao L, Decker H, Shen B: Cloning, sequencing, and heterologous expression of the elmGHIJ genes involved in the biosynthesis of the polyketide antibiotic elloramycin from Streptomyces olivaceus Tu2353. J Nat Prod. 2001 Apr;64(4):444-9. doi: 10.1021/np010007+. [PubMed:11325225 ]
  5. Ramos A, Lombo F, Brana AF, Rohr J, Mendez C, Salas JA: Biosynthesis of elloramycin in Streptomyces olivaceus requires glycosylation by enzymes encoded outside the aglycon cluster. Microbiology (Reading). 2008 Mar;154(Pt 3):781-788. doi: 10.1099/mic.0.2007/014035-0. [PubMed:18310024 ]
  6. LOTUS database [Link]