NP-MRD: Showing NP-Card for 7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione (NP0144978)

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Record Information

Version

2.0

Created at

2022-09-02 00:04:38 UTC

Updated at

2022-09-02 00:04:38 UTC

NP-MRD ID

NP0144978

Secondary Accession Numbers

None

Natural Product Identification

Common Name

7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione

Description

7-(Hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]Dodec-5-ene-4,9,12-trione belongs to the class of organic compounds known as cyclohexenones. Cyclohexenones are compounds containing a cylohexenone moiety, which is a six-membered aliphatic ring that carries a ketone and has one endocyclic double bond. 7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione is found in Penicillium chrysogenum. 7-(Hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]Dodec-5-ene-4,9,12-trione is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004151517362D          

 36 38  0  0  0  0            999 V2000
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M  END

     RDKit          3D

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M  END


  Mrv1533004151517362D          

 36 38  0  0  0  0            999 V2000
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 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  2  0  0  0  0
 24 25  1  4  0  0  0
 18 26  1  0  0  0  0
 26 27  1  0  0  0  0
 26 28  1  0  0  0  0
  7 28  1  0  0  0  0
 28 29  2  0  0  0  0
 26 30  1  0  0  0  0
 30 31  2  0  0  0  0
 30 32  1  0  0  0  0
  8 32  1  0  0  0  0
 32 33  1  0  0  0  0
 32 34  1  0  0  0  0
 15 35  1  0  0  0  0
  6 36  1  4  0  0  0
M  END
> <DATABASE_ID>
NP0144978

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC=CC=CC(O)=C1C2C3C(C)(O)C(=O)C(C)=C(O)C3(C(=O)C=CC=CC)C(C)(C1=O)C(=O)C2(C)O

> <INCHI_IDENTIFIER>
InChI=1S/C28H32O8/c1-7-9-11-13-16(29)18-19-20-27(6,36)21(31)15(3)22(32)28(20,17(30)14-12-10-8-2)25(4,23(18)33)24(34)26(19,5)35/h7-14,19-20,29,32,35-36H,1-6H3

> <INCHI_KEY>
CDXVBNMKICCDER-UHFFFAOYSA-N

> <FORMULA>
C28H32O8

> <MOLECULAR_WEIGHT>
496.556

> <EXACT_MASS>
496.20971799

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
68

> <JCHEM_AVERAGE_POLARIZABILITY>
51.77927440673113

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione

> <ALOGPS_LOGP>
2.71

> <JCHEM_LOGP>
3.2783070510000005

> <ALOGPS_LOGS>
-4.75

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
9.33033332599032

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.8286807072225018

> <JCHEM_PKA_STRONGEST_BASIC>
-3.698010853422435

> <JCHEM_POLAR_SURFACE_AREA>
149.19999999999996

> <JCHEM_REFRACTIVITY>
140.4647

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
8.89e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-APR-15         0                                  
HETATM    1  C   UNK     0      -3.658   8.688   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -3.165   7.228   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -4.182   6.072   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -3.672   4.562   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -2.311   3.639   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.413   2.145   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.029   0.790   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.629   2.625   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       2.805   1.234   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.132   2.016   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       5.183   3.288   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       4.582   3.621   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       5.473   1.257   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       7.093   1.706   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       5.486  -0.283   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.159  -1.064   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       4.811  -2.592   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       2.608  -0.251   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       0.937   0.591   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       0.422  -1.467   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       0.620   2.634   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       1.186   4.289   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       1.200   5.982   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       2.540   6.741   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       2.552   8.281   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       1.492  -1.087   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       1.950  -2.704   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       0.151  -0.329   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0      -1.133  -1.691   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0       1.739  -0.058   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0       3.470  -0.290   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0       1.731   0.968   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       0.870  -0.471   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0       0.002   1.743   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0       6.962  -1.068   0.000  0.00  0.00           C+0
HETATM   36  O   UNK     0      -3.085   1.810   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7   36                                                  
CONECT    7    6    8   28                                                  
CONECT    8    7    9   32                                                  
CONECT    9    8   10   18                                                  
CONECT   10    9   11   12   13                                             
CONECT   11   10                                                            
CONECT   12   10                                                            
CONECT   13   10   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16   35                                                  
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16    9   19   26                                             
CONECT   19   18   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24                                                            
CONECT   26   18   27   28   30                                             
CONECT   27   26                                                            
CONECT   28   26    7   29                                                  
CONECT   29   28                                                            
CONECT   30   26   31   32                                                  
CONECT   31   30                                                            
CONECT   32   30    8   33   34                                             
CONECT   33   32                                                            
CONECT   34   32                                                            
CONECT   35   15                                                            
CONECT   36    6                                                            
MASTER        0    0    0    0    0    0    0    0   36    0   76    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₈H₃₂O₈

Average Mass

496.5560 Da

Monoisotopic Mass

496.20972 Da

IUPAC Name

7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione

Traditional Name

7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione

CAS Registry Number

Not Available

SMILES

CC=CC=CC(O)=C1C2C3C(C)(O)C(=O)C(C)=C(O)C3(C(=O)C=CC=CC)C(C)(C1=O)C(=O)C2(C)O

InChI Identifier

InChI=1S/C28H32O8/c1-7-9-11-13-16(29)18-19-20-27(6,36)21(31)15(3)22(32)28(20,17(30)14-12-10-8-2)25(4,23(18)33)24(34)26(19,5)35/h7-14,19-20,29,32,35-36H,1-6H3

InChI Key

CDXVBNMKICCDER-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Penicillium chrysogenum	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as cyclohexenones. Cyclohexenones are compounds containing a cylohexenone moiety, which is a six-membered aliphatic ring that carries a ketone and has one endocyclic double bond.

Kingdom

Organic compounds

Super Class

Organic oxygen compounds

Class

Organooxygen compounds

Sub Class

Carbonyl compounds

Direct Parent

Cyclohexenones

Alternative Parents

Substituents

Cyclohexenone
B'-hydroxy-alpha,beta-unsaturated-ketone
Acyloin
Vinylogous acid
Alpha,beta-unsaturated ketone
Tertiary alcohol
Enone
Cyclic alcohol
Acryloyl-group
Polyol
Enol
Organic oxide
Hydrocarbon derivative
Alcohol
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.71	ALOGPS
logP	3.28	ChemAxon
logS	-4.8	ALOGPS
pKa (Strongest Acidic)	3.83	ChemAxon
pKa (Strongest Basic)	-3.7	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	149.2 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	140.46 m³·mol⁻¹	ChemAxon
Polarizability	51.78 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione (NP0144978)

MOL for NP0144978 (7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione)

3D MOL for NP0144978 (7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione)

3D SDF for NP0144978 (7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione)

3D-SDF for NP0144978 (7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione)

PDB for NP0144978 (7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione)

3D PDB for NP0144978 (7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione)

SMILES for NP0144978 (7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione)

INCHI for NP0144978 (7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione)

Structure for NP0144978 (7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione)

3D Structure for NP0144978 (7-(hexa-2,4-dienoyl)-3,6,10-trihydroxy-11-(1-hydroxyhexa-2,4-dien-1-ylidene)-3,5,8,10-tetramethyltricyclo[6.2.2.0²,⁷]dodec-5-ene-4,9,12-trione)