Np mrd loader

Record Information
Version2.0
Created at2022-09-01 22:53:25 UTC
Updated at2024-09-03 04:16:50 UTC
NP-MRD IDNP0144015
Natural Product DOIhttps://doi.org/10.57994/0825
Secondary Accession NumbersNone
Natural Product Identification
Common Namepatchoulol
DescriptionPatchouli alcohol, also known as patchoulol, belongs to the class of organic compounds known as tertiary alcohols. Tertiary alcohols are compounds in which a hydroxy group, -OH, is attached to a saturated carbon atom R3COH (R not H ). patchoulol is found in Pogostemon cablin, Teucrium leucocladum and Valeriana officinalis. patchoulol was first documented in 2022 (PMID: 36015115). Based on a literature review a small amount of articles have been published on patchouli alcohol (PMID: 36042499) (PMID: 35961188) (PMID: 35958917) (PMID: 35720186).
Structure
Thumb
Synonyms
ValueSource
(-)-(1R,3R,6S,7S,8S)-2,2,6,8-Tetramethyltricyclo[5.3.1.0(3,8)]undecan-3-olChEBI
(-)-Patchouli alcoholChEBI
(-)-PatchoulolChEBI
[1R-(1alpha,4beta,4Aalpha,6beta,8aalpha)]-octahydro-4,8a,9,9-tetramethyl-1,6-methano-1(2H)-naphtholChEBI
PatchoulanolChEBI
Patchouli camphorChEBI
Patchoulic alcoholChEBI
PatchoulolChEBI
[1R-(1a,4b,4Aalpha,6b,8aalpha)]-octahydro-4,8a,9,9-tetramethyl-1,6-methano-1(2H)-naphtholGenerator
[1R-(1Α,4β,4aalpha,6β,8aalpha)]-octahydro-4,8a,9,9-tetramethyl-1,6-methano-1(2H)-naphtholGenerator
Chemical FormulaC15H26O
Average Mass222.3720 Da
Monoisotopic Mass222.19837 Da
IUPAC Name(1R,3R,6S,7S,8S)-2,2,6,8-tetramethyltricyclo[5.3.1.0^{3,8}]undecan-3-ol
Traditional Name(1R,3R,6S,7S,8S)-2,2,6,8-tetramethyltricyclo[5.3.1.0^{3,8}]undecan-3-ol
CAS Registry NumberNot Available
SMILES
C[C@H]1CC[C@@]2(O)C(C)(C)[C@@H]3CC[C@@]2(C)[C@H]1C3
InChI Identifier
InChI=1S/C15H26O/c1-10-5-8-15(16)13(2,3)11-6-7-14(15,4)12(10)9-11/h10-12,16H,5-9H2,1-4H3/t10-,11+,12-,14-,15+/m0/s1
InChI KeyGGHMUJBZYLPWFD-CUZKYEQNSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
TOCSY NMR[1H, 1H] NMR Spectrum (2D, 500 MHz, CDCL3, experimental)john.cort@pnnl.govNot AvailableNot Available2023-08-23View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 500 MHz, CDCL3, experimental)john.cort@pnnl.govNot AvailableNot Available2023-08-23View Spectrum
HMBC NMR[1H, 13C] NMR Spectrum (2D, 500 MHz, CDCL3, experimental)john.cort@pnnl.govNot AvailableNot Available2023-08-23View Spectrum
COSY NMR[1H, 1H] NMR Spectrum (2D, 500 MHz, CDCL3, experimental)john.cort@pnnl.govNot AvailableNot Available2023-08-23View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 500 MHz, CDCL3, experimental)john.cort@pnnl.govNot AvailableNot Available2023-08-23View Spectrum
NMR[1H, 1H] NMR Spectrum (2D, 500 MHz, CDCL3, experimental)john.cort@pnnl.govNot AvailableNot Available2023-08-23View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, CDCL3, experimental)john.cort@pnnl.govNot AvailableNot Available2023-08-23View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CDCL3, experimental)john.cort@pnnl.govNot AvailableNot Available2023-08-23View Spectrum
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Pogostemon cablinLOTUS Database
Teucrium leucocladumLOTUS Database
Valeriana officinalisLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as tertiary alcohols. Tertiary alcohols are compounds in which a hydroxy group, -OH, is attached to a saturated carbon atom R3COH (R not H ).
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassAlcohols and polyols
Direct ParentTertiary alcohols
Alternative Parents
Substituents
  • Tertiary alcohol
  • Cyclic alcohol
  • Hydrocarbon derivative
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.19ALOGPS
logP3.5ChemAxon
logS-4.4ALOGPS
pKa (Strongest Basic)0.29ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area20.23 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity66.22 m³·mol⁻¹ChemAxon
Polarizability26.75 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00003168
Chemspider ID9130391
KEGG Compound IDNot Available
BioCyc IDCPD-11399
BiGG IDNot Available
Wikipedia LinkPatchoulol
METLIN IDNot Available
PubChem Compound10955174
PDB IDNot Available
ChEBI ID7940
Good Scents IDrw1040361
References
General References
  1. Oliveira TAS, Vieira TM, Esperandim VR, Martins CHG, Magalhaes LG, Miranda MLD, Crotti AEM: Antibacterial, Antiparasitic, and Cytotoxic Activities of Chemical Characterized Essential Oil of Chrysopogon zizanioides Roots. Pharmaceuticals (Basel). 2022 Aug 5;15(8):967. doi: 10.3390/ph15080967. [PubMed:36015115 ]
  2. Zhang J, Ou A, Tang X, Wang R, Fan Y, Fang Y, Zhao Y, Zhao P, Chen D, Wang B, Huang Y: "Two-birds-one-stone" colon-targeted nanomedicine treats ulcerative colitis via remodeling immune microenvironment and anti-fibrosis. J Nanobiotechnology. 2022 Aug 30;20(1):389. doi: 10.1186/s12951-022-01598-0. [PubMed:36042499 ]
  3. Du Y, Shi J, Duan R, Tsim KWK, Shen L, Zhang N, Wang B: cRGD peptide incorporated with patchouli alcohol loaded silk fibroin nanoparticles for enhanced targeting of inflammatory sites in colitis. Biomater Adv. 2022 Sep;140:213069. doi: 10.1016/j.bioadv.2022.213069. Epub 2022 Aug 6. [PubMed:35961188 ]
  4. Fan H, Zhang L, Li Y, Soo Khoo C, Han D, Liu Q, Li P, Zhang X: Antioxidant and Immunomodulatory Activities of Essential Oil Isolated from Anti-Upper Respiratory Tract Infection Formulation and Their Chemical Analysis. Evid Based Complement Alternat Med. 2022 Jul 31;2022:7297499. doi: 10.1155/2022/7297499. eCollection 2022. [PubMed:35958917 ]
  5. Chen M, Wen H, Zhou S, Yan X, Li H: Patchouli Alcohol Inhibits D-Gal Induced Oxidative Stress and Ameliorates the Quality of Aging Cartilage via Activating the Nrf2/HO-1 Pathway in Mice. Oxid Med Cell Longev. 2022 Jun 8;2022:6821170. doi: 10.1155/2022/6821170. eCollection 2022. [PubMed:35720186 ]
  6. LOTUS database [Link]